Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0105200-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:299704:301425:1 gene:Os07g0105200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0105200-01)
Sequence

ATGGGGATGGAGGCCTACGAGCTGGATGCATCCACCATCCCTGATCATCACCTCCTCGAC
CTCGACTCCACCTTTGCCGCCATCGTCGACCGCGTCGTCTTCAACCACTCCGGCCCCGGC
ATCAAGTCCATGTCGCTGGCGCACACGCGCTACGACACCGACGGCGACCGGAGGGTGACG
GCCTGGCTGGACCGCCTGGCGTCCCGCGAGCACCACCGCCTGGAGAGGCTCGACGTCAAC
ATTGGCGCCGCCCTGCACACGCCGGCGTCGCTGTTCCGGTGCGAGACGCTGGTGGAGCTG
CGGCTGGTGGTGCACGCCGCCGCTCGTGGGTTGCGGCTGGACGTGGACGGCGCCGTCCAT
CTCCCGCAGCTGAGGCGGTTGTGCCTGGAGCACGCGGGGTTCCGCAGCTCGACCCAATTC
CAGAACCTCATCGACGGGTGCCCGTTGCTGGAGTTGCTGCACCTGAGGTTCACGGCGGTG
GCGCGGAGGGAGGACACGGTGGGCATCGAGATCCGCAGCCCGTCGGTCCGGCGGGTGGTG
TTGGAAGGGTGCGGCGGGTACGGCATGGTGCCGTTCGAGGTGTCGGCGCCCAACGTGGAG
GAGTTGGTGTTGTCCGGGCGGAACATGGTCGCCGTCGAGAAGGGCGGCGTGAGGAGGCTG
TCGGCGCGGAAGGTGAGCCTGCTCATGGACGACAAGCTGTGGTGGTACAACGTCTTTGCA
CCCTTCCACCACTTCACGGCCTTCCTCAACGTCGGGACCAACATGAGTCGCATCATGGCT
GGCTTCCATGGCGTCCTCGAGCTCGCCATCTCCGGCTGGTGCATCGAGTACCTGTCGAAG
ATCGTGGACAGCATGAATCTGCCGGATTGGGGAATAGAGGTTCTGAGAGTGGAGGGAATG
TGGCCAAACCAAGGCCAAGCAGGCGTCGTCCTGCATCTCCTTCGCAGCTCGCCATGTCTC
AGGAACCTTTTCATCACCAACGAGTTGGAGCATCCCAGGGAGATCTCGATCGATGAGAAT
CGGGAGCAGTATCCTGCAACGCCGGAGTTCCTGTTCGACGCCGTGCCCGGCCGGCTGACC
CATCTGAGGCGCTTCTTCATGTTCAACTTCAGCGGCAACCGCAACGAGATCAGCATCATC
AAGTTCGTCTTAGGAAGCTCATCCATTTCCATCAACCCGGACCAGTTCGGTGTCACTGAT
TACCTCGGCAACGACTGGAGTTCCACCCAGCTTATCCTAGCCTCGCTCTAG

Peptide Sequence

PEP ID

Os07t0105200-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:299704:301425:1 gene:Os07g0105200 transcript:Os07t0105200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0105200-01)
Sequence

MGMEAYELDASTIPDHHLLDLDSTFAAIVDRVVFNHSGPGIKSMSLAHTRYDTDGDRRVT
AWLDRLASREHHRLERLDVNIGAALHTPASLFRCETLVELRLVVHAAARGLRLDVDGAVH
LPQLRRLCLEHAGFRSSTQFQNLIDGCPLLELLHLRFTAVARREDTVGIEIRSPSVRRVV
LEGCGGYGMVPFEVSAPNVEELVLSGRNMVAVEKGGVRRLSARKVSLLMDDKLWWYNVFA
PFHHFTAFLNVGTNMSRIMAGFHGVLELAISGWCIEYLSKIVDSMNLPDWGIEVLRVEGM
WPNQGQAGVVLHLLRSSPCLRNLFITNELEHPREISIDENREQYPATPEFLFDAVPGRLT
HLRRFFMFNFSGNRNEISIIKFVLGSSSISINPDQFGVTDYLGNDWSSTQLILASL

Transcript Sequence

Transcript ID

Os07t0105200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:299704:301425:1 gene:Os07g0105200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0105200-01)
Sequence

GTGCGCGCGTCAGCAGTGTCGAGGAGGTTGCGTGAGGCGTGGATGGGGATGGAGGCCTAC
GAGCTGGATGCATCCACCATCCCTGATCATCACCTCCTCGACCTCGACTCCACCTTTGCC
GCCATCGTCGACCGCGTCGTCTTCAACCACTCCGGCCCCGGCATCAAGTCCATGTCGCTG
GCGCACACGCGCTACGACACCGACGGCGACCGGAGGGTGACGGCCTGGCTGGACCGCCTG
GCGTCCCGCGAGCACCACCGCCTGGAGAGGCTCGACGTCAACATTGGCGCCGCCCTGCAC
ACGCCGGCGTCGCTGTTCCGGTGCGAGACGCTGGTGGAGCTGCGGCTGGTGGTGCACGCC
GCCGCTCGTGGGTTGCGGCTGGACGTGGACGGCGCCGTCCATCTCCCGCAGCTGAGGCGG
TTGTGCCTGGAGCACGCGGGGTTCCGCAGCTCGACCCAATTCCAGAACCTCATCGACGGG
TGCCCGTTGCTGGAGTTGCTGCACCTGAGGTTCACGGCGGTGGCGCGGAGGGAGGACACG
GTGGGCATCGAGATCCGCAGCCCGTCGGTCCGGCGGGTGGTGTTGGAAGGGTGCGGCGGG
TACGGCATGGTGCCGTTCGAGGTGTCGGCGCCCAACGTGGAGGAGTTGGTGTTGTCCGGG
CGGAACATGGTCGCCGTCGAGAAGGGCGGCGTGAGGAGGCTGTCGGCGCGGAAGGTGAGC
CTGCTCATGGACGACAAGCTGTGGTGGTACAACGTCTTTGCACCCTTCCACCACTTCACG
GCCTTCCTCAACGTCGGGACCAACATGAGTCGCATCATGGCTGGCTTCCATGGCGTCCTC
GAGCTCGCCATCTCCGGCTGGTGCATCGAGTACCTGTCGAAGATCGTGGACAGCATGAAT
CTGCCGGATTGGGGAATAGAGGTTCTGAGAGTGGAGGGAATGTGGCCAAACCAAGGCCAA
GCAGGCGTCGTCCTGCATCTCCTTCGCAGCTCGCCATGTCTCAGGAACCTTTTCATCACC
AACGAGTTGGAGCATCCCAGGGAGATCTCGATCGATGAGAATCGGGAGCAGTATCCTGCA
ACGCCGGAGTTCCTGTTCGACGCCGTGCCCGGCCGGCTGACCCATCTGAGGCGCTTCTTC
ATGTTCAACTTCAGCGGCAACCGCAACGAGATCAGCATCATCAAGTTCGTCTTAGGAAGC
TCATCCATTTCCATCAACCCGGACCAGTTCGGTGTCACTGATTACCTCGGCAACGACTGG
AGTTCCACCCAGCTTATCCTAGCCTCGCTCTAGTTGATTCGCTAGCTCTCTCCTGTGTGT
GTCTTCATCGACATTTTATCATCGATAGATCTGGCTAGTAGATGATGCCAGATGTTATTG
CAGATATATGGTGCAACTGCACACAGACAATCCATGCAGTGGTTCATGCAATGCAAGTAT
GCAACAGACTGTTTTAAAGGAGAAGAAGCTTCGTTTAGC