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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0105000-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:291076:291795:1 gene:Os07g0105000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UCLACYANIN-LIKE PROTEIN 20 description:Cupredoxin domain containing protein. (Os07t0105000-00)
Sequence

ATGGCAATAAGCAGATTAATGGTGACGAAGAAGCAGCAGGCGGCCTTGTTGGCCGTGGTC
GCCGTGGCAGCTCTGGCGCAGGTCGCGGCGGCGGCGGTGCATCCGGTGGGAGGCAATGGC
GCCTGGGACACCACCGGCAACTACAATGCCTGGTCCGTCTCCCAAAAGTTCTCCCAAGGC
GACTCCATCCTGTTCACCTATCCCTCCTCGCACGACGTGGTGGAGGTCCCCAAGGCCAGC
TACGACGCCTGCTCACCCGCCAACGCCCTCGCCTCCTACACCGGCGGCAGCACCACCGTC
AAGCTCGACGCCCCGGGCAAGCACTACTTCATCTGCGGCGTGCCCGGCCACTGCGCCGCC
GGCATGAAGCTCGAGGTCACCGTCGCCGCCGCCACCGCCACCAAGCCCAGGCACAAGAAG
GGCGCCGCCCCCGCCGCCGCCCCGGCGATGCCTCCCGCCGTCTCATCACCCACCGAGGAG
ATGCCCGCTGTCACCTCTCCCACCGGATCTCCGGCGCCGTCGTCCGCGTCTGCTGCGTCA
ACCATCGCCATCAACGTCGCCGCCACGCTCGCCGCAGGGATGGCATTGGCCTTCCTCGCC
ATGTGA

Peptide Sequence

PEP ID

Os07t0105000-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:291076:291795:1 gene:Os07g0105000 transcript:Os07t0105000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UCLACYANIN-LIKE PROTEIN 20 description:Cupredoxin domain containing protein. (Os07t0105000-00)
Sequence

MAISRLMVTKKQQAALLAVVAVAALAQVAAAAVHPVGGNGAWDTTGNYNAWSVSQKFSQG
DSILFTYPSSHDVVEVPKASYDACSPANALASYTGGSTTVKLDAPGKHYFICGVPGHCAA
GMKLEVTVAAATATKPRHKKGAAPAAAPAMPPAVSSPTEEMPAVTSPTGSPAPSSASAAS
TIAINVAATLAAGMALAFLAM

Transcript Sequence

Transcript ID

Os07t0105000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:291076:291795:1 gene:Os07g0105000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UCLACYANIN-LIKE PROTEIN 20 description:Cupredoxin domain containing protein. (Os07t0105000-00)
Sequence

ATGGCAATAAGCAGATTAATGGTGACGAAGAAGCAGCAGGCGGCCTTGTTGGCCGTGGTC
GCCGTGGCAGCTCTGGCGCAGGTCGCGGCGGCGGCGGTGCATCCGGTGGGAGGCAATGGC
GCCTGGGACACCACCGGCAACTACAATGCCTGGTCCGTCTCCCAAAAGTTCTCCCAAGGC
GACTCCATCCTGTTCACCTATCCCTCCTCGCACGACGTGGTGGAGGTCCCCAAGGCCAGC
TACGACGCCTGCTCACCCGCCAACGCCCTCGCCTCCTACACCGGCGGCAGCACCACCGTC
AAGCTCGACGCCCCGGGCAAGCACTACTTCATCTGCGGCGTGCCCGGCCACTGCGCCGCC
GGCATGAAGCTCGAGGTCACCGTCGCCGCCGCCACCGCCACCAAGCCCAGGCACAAGAAG
GGCGCCGCCCCCGCCGCCGCCCCGGCGATGCCTCCCGCCGTCTCATCACCCACCGAGGAG
ATGCCCGCTGTCACCTCTCCCACCGGATCTCCGGCGCCGTCGTCCGCGTCTGCTGCGTCA
ACCATCGCCATCAACGTCGCCGCCACGCTCGCCGCAGGGATGGCATTGGCCTTCCTCGCC
ATGTGAGA