Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0103100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:191053:196429:1 gene:Os07g0103100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glutamate receptor homolog 3.6, GLUTAMATE RECEPTOR-LIKE 3.4 description:Similar to Glutamate receptor 3.4 precursor (Ligand-gated ion channel 3.4) (AtGLR4). Splice isoform 2. (Os07t0103100-01)
Sequence	ATGGCGGGTGATCAGCTGCTCCGGCGGCTCCTGTTCCTCCTGTGGGTGGTGGCGCTGGCG GTGCCGGGGCTGGCGGCCAGGCCGGCGAACGTCAGCATCGGCGCGCTCTTCACCTTCGAC TCCGTCATCGGGAGGGCGGCCAAGGTCGCCATCGAGCTGGCCGTCGCCGACGTGAACCGC GACGACGGCGTTCTCAACGGGACATACCTGAGCGTGGTGGAGCAGGACACCAAGTGCAGC GGATTCATCGGCATCATCCAAGGTCTGCAGGTGATGGAGAAGAAGGTGGTGGCGGTGGTG GGGCCACAGTCGTCGGGGATCGGACACGTGGTGTCGCACGTCGCCGACGAGCTGCGCATC CCGCTGGTGTCGTTCGCCGCCACCGATCCGACGCTGGGCTCCTCCCAATACCCTTACTTC CTCCGCGCCACCCACAGCGACTTCTTCCAGATGGCCGCCGTCGCCGACATCATCTCCCAC TACGCCTGGCGCGAGGCCACCCTCATCTACGTCGACAACGACTACGGCCGCGCCGCCCTC GACGCCCTCGGCGACCACCTCCAGTCCATGCGCTCCAAGGTCTCCTACCGTGCCCCGCTC CCCCCCGCCGCCGACCGCGCCGCCATCACCGACCTCCTCCTCCGCGTCAGCATGATGGAG TCCCGCGTCATCGTCGTCCACGCCAACCCGGACTCCGGCCTCGACATCTTCGCCGCCGCG CAGTCGCTCGGCATGATGTCCAGCGGCTACGTCTGGATCGCCACCGAGTGGCTCGCCGCG CTGCTCGACTCCGACTCGTCGCCTCCCAGGAAGACCACCGCCCTGGCCCTGCTCCAGGGT GTCGTCACGCTCCGCCAGTACACCCCGGACTCCGACGCCAAGAGGTCGCTCATGTCCAGG TTCGCCGCGCGGCTGCAGGCCCACAACACCACTGGCGGCATCAACGCGTACGTGCTCTTC GCCTACGACGCCGTGTGGATGGCGGCGCGCGCCGTCGACCAGCTCCTCGTCGACGGCTCC AACGTCTCCTTCTCCGACGACGCCAGGCTGCGCGCCGAGAACGAGACCGGGAGCGCGCTC CGCCTGGGCGCACTCAAGGTGTTCGACCAGGGCGAGCAGCTGCTGAGCAAGATGAAAACG CTCAACTTCACCGGCGTCACCGGGCAGGTGCGGTTCGGCGACGACAGGAACCTGGCCGAC CCGGCGTACGAGGTGCTGAACGTGGGCGGCACCGGGGTCCGGCGGGTGGGGTACTGGTCG AACCGCACGCGGCTGTCGGTGACGGCGCCCGAGCAGGAGCAGAACGGCAAGAAGAAGAAG CAGCAGGGGGAGGAGCTTTACAGCGTGATCTGGCCGGGGGAGACAGCGTCGACGCCGCGC GGGTGGGTGTTCCCGAACAACGGGAAGGCGCTGCGGATCGGGGTGCCGTACCGGACGACG TACAAGCAGTTCGTGTCCAAGGACGCGGGGGGGCCGGACGGCGCGAGCGGGTACTGCATC GACGTGTTCAAGGCGGCGGTGGCGCTGCTGGCGTACCCGGTGCCGGTGTCGTACGTGGTG GTGGGGGACGGGGTGAAGAACCCGAGCTACGGGGAGCTGGTGCAGCGGGTGGCGGAGGGG GAGCTGGACGCGGCGGTGGGGGACATATCGATCGTGACCAACAGGACGCGGGTGGTGGAC TTCACGCAGCCGTACGTGGAGTCCGGGCTGGTGATCGTGACGGCGGTGAGGGAGAGGGCG TCCAGCGCGTGGGCGTTCCTCAAGCCCTTCACGAGGGAGATGTGGGCGGTCACGGGGGGA TTCTTCCTCTTCGTCGGGGCGGTGGTCTGGGTGCTGGAGCACCGCTCCAACACCGACTTC AGGGGCTCGCCGCGGAAGCAGCTGGTCACCGTCTTCTGGTTCAGCTTCTCCACCATGTTC TTCGCCCACCGGGAGAACACGGTGAGCACGCTGGGGAGGCTGGTGCTCATCATCTGGCTC TTCGTCGTGCTCATCATCAACTCCAGCTACACCGCCAGCCTCACCTCCATCCTCACCGTG CAGCAGCTGTCCACGGGCATCCAGGGCCTTGACGGCCTCATCGCCAGCTCCGACCCCATC GGCTTCCAGGTCGGCTCCTTCGCCAAGAGCTACCTCATGCAGGAGCTGGGCGTGCCCGAG TCCCGCCTCCGGGAGCTCGCCATCACCGACTACGCCTCCAGCCTGCAGACCGGCGTCGTG GCGGCCATCGTCGACGAGCTGCCGTACGTCGAGCTCTTCCTCTCCACCAACTGCCAGTTC AGGACGGTGGGACAGGAGTTCACAAAGAGCGGATGGGGATTCGCTTTCCAGCGCGACTCC CCTCTGGCCGTGGACCTTTCGACGGCGATCCTGACGCTGTCGGAGAACGGCGACCTGCAG AGGATCCACGATAAGTGGCTGAGCCCGGGGCAGTGCGCGTCGCAGGGCACCGACGTCGGC GCCGACCGCCTCAACCTCAGCAGCTTCTGGGGACTCTTCCTCATCTGCGGCGTCGCCTGC TTCATTGCCCTCCTCATCTTCTTCTTCCGCACGCTGCGCCAGTACTTCAGATACCACGGC CACGCCGACATCGACGACGACGACGACAGCGAGAACAAGGCAACGCCGTTCCCGGTGGAT GGCGGCGAGAGGATGAGCTCGCGGCGGCCGGCGCGGCTGGCCAGCATCCGGGACCTGATG ACGTTCGTGGACATGAAGGAGGCGGAGGTGAAGCGGAGGAAGAAGATGATGAACGAAGAC AGCAGCAGCTGCGGGAGGCGGCTGGACATGGACAGTCACAGTCACAGGTCCATGCCCACC TCCGCCAACGCCAACGCCGCCCCGCCCTCTTCTTCCTTTTCCTCCGTCTAA

Peptide Sequence

PEP ID	Os07t0103100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:191053:196429:1 gene:Os07g0103100 transcript:Os07t0103100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glutamate receptor homolog 3.6, GLUTAMATE RECEPTOR-LIKE 3.4 description:Similar to Glutamate receptor 3.4 precursor (Ligand-gated ion channel 3.4) (AtGLR4). Splice isoform 2. (Os07t0103100-01)
Sequence	MAGDQLLRRLLFLLWVVALAVPGLAARPANVSIGALFTFDSVIGRAAKVAIELAVADVNR DDGVLNGTYLSVVEQDTKCSGFIGIIQGLQVMEKKVVAVVGPQSSGIGHVVSHVADELRI PLVSFAATDPTLGSSQYPYFLRATHSDFFQMAAVADIISHYAWREATLIYVDNDYGRAAL DALGDHLQSMRSKVSYRAPLPPAADRAAITDLLLRVSMMESRVIVVHANPDSGLDIFAAA QSLGMMSSGYVWIATEWLAALLDSDSSPPRKTTALALLQGVVTLRQYTPDSDAKRSLMSR FAARLQAHNTTGGINAYVLFAYDAVWMAARAVDQLLVDGSNVSFSDDARLRAENETGSAL RLGALKVFDQGEQLLSKMKTLNFTGVTGQVRFGDDRNLADPAYEVLNVGGTGVRRVGYWS NRTRLSVTAPEQEQNGKKKKQQGEELYSVIWPGETASTPRGWVFPNNGKALRIGVPYRTT YKQFVSKDAGGPDGASGYCIDVFKAAVALLAYPVPVSYVVVGDGVKNPSYGELVQRVAEG ELDAAVGDISIVTNRTRVVDFTQPYVESGLVIVTAVRERASSAWAFLKPFTREMWAVTGG FFLFVGAVVWVLEHRSNTDFRGSPRKQLVTVFWFSFSTMFFAHRENTVSTLGRLVLIIWL FVVLIINSSYTASLTSILTVQQLSTGIQGLDGLIASSDPIGFQVGSFAKSYLMQELGVPE SRLRELAITDYASSLQTGVVAAIVDELPYVELFLSTNCQFRTVGQEFTKSGWGFAFQRDS PLAVDLSTAILTLSENGDLQRIHDKWLSPGQCASQGTDVGADRLNLSSFWGLFLICGVAC FIALLIFFFRTLRQYFRYHGHADIDDDDDSENKATPFPVDGGERMSSRRPARLASIRDLM TFVDMKEAEVKRRKKMMNEDSSSCGRRLDMDSHSHRSMPTSANANAAPPSSSFSSV

Transcript Sequence

Transcript ID	Os07t0103100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:191053:196429:1 gene:Os07g0103100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glutamate receptor homolog 3.6, GLUTAMATE RECEPTOR-LIKE 3.4 description:Similar to Glutamate receptor 3.4 precursor (Ligand-gated ion channel 3.4) (AtGLR4). Splice isoform 2. (Os07t0103100-01)
Sequence	GGCCTGAGGTCATGAGGAGAGGAGCTGAGGCCTCACCCTCCTCCTGATGCCTTGCTCTCT TGCCTCCTGCTCTCGCTTCTTCTCTCCTCTATTTTCTTGGCCTCGCCTCGCCGGCTGCTC AGTGCTCAATCAAGAAGAAGAAGAAGAAGCTCTCTTTCGATGATCTCCCTGAGTTAGTTA ACGCTTACTCTGCTCTCTATATATCTGTTTGATCCAGCCAGCCACCTCCATCTTTGCTTG GTTGGTTGAGATTTGAGATGTTGAGGTCCATGTTTGAGATTGAATTGAGGACAGGTTCCT GAACCGGCAGGGAGGCTGAGGAGTTAATTAATTTCCGTCTGTCTGTCGGTGCAGCCAGTT CCCATACCACCTGCTGCATCAACTCCGTACTCCATAAACATATATATTTTGCTTCTTCTC TTCTCCCTGCTCCATCGATTCTTCTTGTAAGAGCTGCTTGCTACCTAGTTGGATCAGTAG TAGAGGAGGCAGCTAGCTAAGCTAGCTACCAATTAATGGCGGGTGATCAGCTGCTCCGGC GGCTCCTGTTCCTCCTGTGGGTGGTGGCGCTGGCGGTGCCGGGGCTGGCGGCCAGGCCGG CGAACGTCAGCATCGGCGCGCTCTTCACCTTCGACTCCGTCATCGGGAGGGCGGCCAAGG TCGCCATCGAGCTGGCCGTCGCCGACGTGAACCGCGACGACGGCGTTCTCAACGGGACAT ACCTGAGCGTGGTGGAGCAGGACACCAAGTGCAGCGGATTCATCGGCATCATCCAAGGTC TGCAGGTGATGGAGAAGAAGGTGGTGGCGGTGGTGGGGCCACAGTCGTCGGGGATCGGAC ACGTGGTGTCGCACGTCGCCGACGAGCTGCGCATCCCGCTGGTGTCGTTCGCCGCCACCG ATCCGACGCTGGGCTCCTCCCAATACCCTTACTTCCTCCGCGCCACCCACAGCGACTTCT TCCAGATGGCCGCCGTCGCCGACATCATCTCCCACTACGCCTGGCGCGAGGCCACCCTCA TCTACGTCGACAACGACTACGGCCGCGCCGCCCTCGACGCCCTCGGCGACCACCTCCAGT CCATGCGCTCCAAGGTCTCCTACCGTGCCCCGCTCCCCCCCGCCGCCGACCGCGCCGCCA TCACCGACCTCCTCCTCCGCGTCAGCATGATGGAGTCCCGCGTCATCGTCGTCCACGCCA ACCCGGACTCCGGCCTCGACATCTTCGCCGCCGCGCAGTCGCTCGGCATGATGTCCAGCG GCTACGTCTGGATCGCCACCGAGTGGCTCGCCGCGCTGCTCGACTCCGACTCGTCGCCTC CCAGGAAGACCACCGCCCTGGCCCTGCTCCAGGGTGTCGTCACGCTCCGCCAGTACACCC CGGACTCCGACGCCAAGAGGTCGCTCATGTCCAGGTTCGCCGCGCGGCTGCAGGCCCACA ACACCACTGGCGGCATCAACGCGTACGTGCTCTTCGCCTACGACGCCGTGTGGATGGCGG CGCGCGCCGTCGACCAGCTCCTCGTCGACGGCTCCAACGTCTCCTTCTCCGACGACGCCA GGCTGCGCGCCGAGAACGAGACCGGGAGCGCGCTCCGCCTGGGCGCACTCAAGGTGTTCG ACCAGGGCGAGCAGCTGCTGAGCAAGATGAAAACGCTCAACTTCACCGGCGTCACCGGGC AGGTGCGGTTCGGCGACGACAGGAACCTGGCCGACCCGGCGTACGAGGTGCTGAACGTGG GCGGCACCGGGGTCCGGCGGGTGGGGTACTGGTCGAACCGCACGCGGCTGTCGGTGACGG CGCCCGAGCAGGAGCAGAACGGCAAGAAGAAGAAGCAGCAGGGGGAGGAGCTTTACAGCG TGATCTGGCCGGGGGAGACAGCGTCGACGCCGCGCGGGTGGGTGTTCCCGAACAACGGGA AGGCGCTGCGGATCGGGGTGCCGTACCGGACGACGTACAAGCAGTTCGTGTCCAAGGACG CGGGGGGGCCGGACGGCGCGAGCGGGTACTGCATCGACGTGTTCAAGGCGGCGGTGGCGC TGCTGGCGTACCCGGTGCCGGTGTCGTACGTGGTGGTGGGGGACGGGGTGAAGAACCCGA GCTACGGGGAGCTGGTGCAGCGGGTGGCGGAGGGGGAGCTGGACGCGGCGGTGGGGGACA TATCGATCGTGACCAACAGGACGCGGGTGGTGGACTTCACGCAGCCGTACGTGGAGTCCG GGCTGGTGATCGTGACGGCGGTGAGGGAGAGGGCGTCCAGCGCGTGGGCGTTCCTCAAGC CCTTCACGAGGGAGATGTGGGCGGTCACGGGGGGATTCTTCCTCTTCGTCGGGGCGGTGG TCTGGGTGCTGGAGCACCGCTCCAACACCGACTTCAGGGGCTCGCCGCGGAAGCAGCTGG TCACCGTCTTCTGGTTCAGCTTCTCCACCATGTTCTTCGCCCACCGGGAGAACACGGTGA GCACGCTGGGGAGGCTGGTGCTCATCATCTGGCTCTTCGTCGTGCTCATCATCAACTCCA GCTACACCGCCAGCCTCACCTCCATCCTCACCGTGCAGCAGCTGTCCACGGGCATCCAGG GCCTTGACGGCCTCATCGCCAGCTCCGACCCCATCGGCTTCCAGGTCGGCTCCTTCGCCA AGAGCTACCTCATGCAGGAGCTGGGCGTGCCCGAGTCCCGCCTCCGGGAGCTCGCCATCA CCGACTACGCCTCCAGCCTGCAGACCGGCGTCGTGGCGGCCATCGTCGACGAGCTGCCGT ACGTCGAGCTCTTCCTCTCCACCAACTGCCAGTTCAGGACGGTGGGACAGGAGTTCACAA AGAGCGGATGGGGATTCGCTTTCCAGCGCGACTCCCCTCTGGCCGTGGACCTTTCGACGG CGATCCTGACGCTGTCGGAGAACGGCGACCTGCAGAGGATCCACGATAAGTGGCTGAGCC CGGGGCAGTGCGCGTCGCAGGGCACCGACGTCGGCGCCGACCGCCTCAACCTCAGCAGCT TCTGGGGACTCTTCCTCATCTGCGGCGTCGCCTGCTTCATTGCCCTCCTCATCTTCTTCT TCCGCACGCTGCGCCAGTACTTCAGATACCACGGCCACGCCGACATCGACGACGACGACG ACAGCGAGAACAAGGCAACGCCGTTCCCGGTGGATGGCGGCGAGAGGATGAGCTCGCGGC GGCCGGCGCGGCTGGCCAGCATCCGGGACCTGATGACGTTCGTGGACATGAAGGAGGCGG AGGTGAAGCGGAGGAAGAAGATGATGAACGAAGACAGCAGCAGCTGCGGGAGGCGGCTGG ACATGGACAGTCACAGTCACAGGTCCATGCCCACCTCCGCCAACGCCAACGCCGCCCCGC CCTCTTCTTCCTTTTCCTCCGTCTAATAACCAATGCATTCCATTAACCTCACATACTAAC CCAAATACTAGGAATTCCTACTAACCAATATCAAGATTGATCAAAGATCATCATCATATT CATCCCTGTAATGGGAAATAGGCAACTAACTAATACTAGTATATTTAAGCGTCCAGTATT ATCCGATGATTAGCCGTGTAAGTTCACTTGTACTACACAATCATGGATCTGAAACAGAAA CTCTATACCAAGGGAAGAAGGGAGAATTGGTGTTTCCTTGAGACTTC