Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0102400-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:147148:150184:-1 gene:Os07g0102400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1084 family protein. (Os07t0102400-01)
Sequence

ATGAGGGAGCCGGTGGTCGTGGCAGCTTCTTCTGCGGCGGCGTTGCGGGGTTTCTGGGAG
GAAGTCAACGAGTCGCCGGCATGGCAGGACGGCGCCTTCTTCTCCCTCTCCGCCGCATAC
GCCCTCGTCTCCGCCGTCGCGCTGATTCAATTGATCAGGATCCAGCGCCGAGTGCCCGAA
TTCGGATGGACCACGCAGAAGGTCTTTCACCTCATGAACTTCCTTGTCAATGGAGTCCGT
GCTCTCGTCTTTGGATTCCATCTCCATGTCTTCCTTCTCTCCGCAAAAGTTTATAAGTTG
GTGCTGCTAGACCTCCCCGGCTTGTTGTTTTTCTCCACCTACACTCTGCTTGTTCTCTTC
TGGGCAGAAATATACCATCAGGCCAGGAGCCTCCCAACAGATAAGTTAAGGATTATATAC
ATAGCCGTCAATGCCATCATTTACACAATTCAGGTTTGTATTTGGGTATACCTCGGAATC
AACGACAACCCATTGGTTGAGCTGGTCAGCAAAATCTTCATAGTAGTTGTCTCTTTTGTG
GCTCTTCTTGGCTTTTCAGTATATGGTGGAAGGCTGTTCTTCTTGCTGAGACGTTTCCCC
ATTGAATCTAAGGGGCGAAAAAAGAAGCTTTATGAGGTTGGGACAGTGACTGCAATCTGC
TGTGCTTGTTTCCTGATAAGGTGCATAGTGGTGGCGATATCAGCATTTGATTCTGATGTA
TCTCTGGAGGTTTTGGACCATCCAATTCTTGATTTCTTCTACTATATGTTGACAGAGATA
CTGCCTTCAGCTCTTGTCCTTTTCATCCTCCGGAAGCTCCCTCCTAAGCGGGTGTCAGCG
CAGTACCACCCAATCAACTAG

Peptide Sequence

PEP ID

Os07t0102400-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:147148:150184:-1 gene:Os07g0102400 transcript:Os07t0102400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1084 family protein. (Os07t0102400-01)
Sequence

MREPVVVAASSAAALRGFWEEVNESPAWQDGAFFSLSAAYALVSAVALIQLIRIQRRVPE
FGWTTQKVFHLMNFLVNGVRALVFGFHLHVFLLSAKVYKLVLLDLPGLLFFSTYTLLVLF
WAEIYHQARSLPTDKLRIIYIAVNAIIYTIQVCIWVYLGINDNPLVELVSKIFIVVVSFV
ALLGFSVYGGRLFFLLRRFPIESKGRKKKLYEVGTVTAICCACFLIRCIVVAISAFDSDV
SLEVLDHPILDFFYYMLTEILPSALVLFILRKLPPKRVSAQYHPIN

Transcript Sequence

Transcript ID

Os07t0102400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:147148:150184:-1 gene:Os07g0102400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1084 family protein. (Os07t0102400-01)
Sequence

ATCCTCTCCTCTCGCATCGCAACTCGCGCGCACACAGAAAAAGAAAAAAAGAAAGAGTCA
AGGGGAGGGAAGGCGAGAGAGAGAGATGAGGGAGCCGGTGGTCGTGGCAGCTTCTTCTGC
GGCGGCGTTGCGGGGTTTCTGGGAGGAAGTCAACGAGTCGCCGGCATGGCAGGACGGCGC
CTTCTTCTCCCTCTCCGCCGCATACGCCCTCGTCTCCGCCGTCGCGCTGATTCAATTGAT
CAGGATCCAGCGCCGAGTGCCCGAATTCGGATGGACCACGCAGAAGGTCTTTCACCTCAT
GAACTTCCTTGTCAATGGAGTCCGTGCTCTCGTCTTTGGATTCCATCTCCATGTCTTCCT
TCTCTCCGCAAAAGTTTATAAGTTGGTGCTGCTAGACCTCCCCGGCTTGTTGTTTTTCTC
CACCTACACTCTGCTTGTTCTCTTCTGGGCAGAAATATACCATCAGGCCAGGAGCCTCCC
AACAGATAAGTTAAGGATTATATACATAGCCGTCAATGCCATCATTTACACAATTCAGGT
TTGTATTTGGGTATACCTCGGAATCAACGACAACCCATTGGTTGAGCTGGTCAGCAAAAT
CTTCATAGTAGTTGTCTCTTTTGTGGCTCTTCTTGGCTTTTCAGTATATGGTGGAAGGCT
GTTCTTCTTGCTGAGACGTTTCCCCATTGAATCTAAGGGGCGAAAAAAGAAGCTTTATGA
GGTTGGGACAGTGACTGCAATCTGCTGTGCTTGTTTCCTGATAAGGTGCATAGTGGTGGC
GATATCAGCATTTGATTCTGATGTATCTCTGGAGGTTTTGGACCATCCAATTCTTGATTT
CTTCTACTATATGTTGACAGAGATACTGCCTTCAGCTCTTGTCCTTTTCATCCTCCGGAA
GCTCCCTCCTAAGCGGGTGTCAGCGCAGTACCACCCAATCAACTAGCTAGAGGCCTCCTA
GTTAGTTACTACATAATATGATGTTATTATATACTACTGTACTTAGTATGTTAGTTATGG
GAAAACTTTGAACTCCTCCCAAAAAGAAGAAAGAAAACAAACTAGAATTGCGCCTGGCAA
GCAGGAGCGGGATGCTGGTAGTGCTTTGAGCTGTAAATGATTGAAAGCGTCAACAAGGCC
TTGTTACTTGGATGGATAGTCAGCTGCTCCATTAATGATGAATGAATTTTGGTGCTTGTG
TAGT