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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0100900-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:56872:58217:-1 gene:Os07g0100900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Legume lectin, beta domain containing protein. (Os07t0100900-01)
Sequence

ATGGCCATGGCGCTGCTCTTCCTCCTCCTCCTGCTGCCGCCGCCCACCGCGCCCTTCTCC
CTGGACTTCTTCCCGGAATCCCCATCTCCCCCGCGCCTCGCCCTCTCCGGCGCAGCCTCC
CTCCGCCCCACCGCCGTCTCCATGGCGTCCCCGCGCGCCCGCCTCCAGCTCACTCACCCC
GTCGCCCTCGGCCCCGCATTCTCCACCTACTTCTCCTTCTCCTTGTCAGGCCCAGGCTCC
CTCTCCTTCTTCCTCACGCCCCACCCCCACCCCGACCGCCACCCTTTCCTCCTCGCCATC
GTCTTCGACGCCGCCGCCCGCGTCCGCATCGACCTCGCCGGCCATACTACGGGTACGGCC
GCCTCCCACCTCGCCCCCTCCTCCGCCCCCGCCCGCCTACATTCCTGGATACACTACAAT
GCCACCTCCGCCACGCTCCAGCTCCGCCTCTCCGCCACCTCCCGACGCCCCGCCCTCCCG
CTGCTCTCCCTCCACCCGCTTCCTCCCTCCGCCCTCCTCCTCCTCCGGACCAAGCCCATG
CTCGCCGGCTTCACCTCCTCCGCCACCAACTGCACCCTCTTCGCATGGGCCTTCCGCGCC
AACAACACCATGCAGCACTCTCAGCCGCTCGACCCCTCCCACCTGCTCACCACGCCGCCA
CCTCACCGCCCACAACCTCACCCCCACCATTATTACCCCTGGCTCTCGCTGCTCTTCGCC
GCCGCTTGTGGTGCCATGCTCACATTCTTCCTACTCTTCGTCTGGTACTCCCTGCTGGCC
ACGCGCCGCCCTGTCGCACCAGTCACCACCTCCGATTCCGACGTCGTCTATGAGAAGATT
GTGCTTGTCGGAGCCAAGGACGACGACGCCCCCGCAGCCACTACTCCGTCTCCAGATGTA
GCTGGTAACAACAACTAG

Peptide Sequence

PEP ID

Os07t0100900-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:56872:58217:-1 gene:Os07g0100900 transcript:Os07t0100900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Legume lectin, beta domain containing protein. (Os07t0100900-01)
Sequence

MAMALLFLLLLLPPPTAPFSLDFFPESPSPPRLALSGAASLRPTAVSMASPRARLQLTHP
VALGPAFSTYFSFSLSGPGSLSFFLTPHPHPDRHPFLLAIVFDAAARVRIDLAGHTTGTA
ASHLAPSSAPARLHSWIHYNATSATLQLRLSATSRRPALPLLSLHPLPPSALLLLRTKPM
LAGFTSSATNCTLFAWAFRANNTMQHSQPLDPSHLLTTPPPHRPQPHPHHYYPWLSLLFA
AACGAMLTFFLLFVWYSLLATRRPVAPVTTSDSDVVYEKIVLVGAKDDDAPAATTPSPDV
AGNNN

Transcript Sequence

Transcript ID

Os07t0100900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:56872:58217:-1 gene:Os07g0100900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Legume lectin, beta domain containing protein. (Os07t0100900-01)
Sequence

AAGCGCTATCCACTCTCTCTCTCACATCACATTTCACCACACTCCACTCCATAGACACAG
ATCGAGCAACGCGTGCGTCGGAGAAGAATGCAGTCGGAGATCTGAGAAGAAGAAGGTTAG
CCATGGCCATGGCGCTGCTCTTCCTCCTCCTCCTGCTGCCGCCGCCCACCGCGCCCTTCT
CCCTGGACTTCTTCCCGGAATCCCCATCTCCCCCGCGCCTCGCCCTCTCCGGCGCAGCCT
CCCTCCGCCCCACCGCCGTCTCCATGGCGTCCCCGCGCGCCCGCCTCCAGCTCACTCACC
CCGTCGCCCTCGGCCCCGCATTCTCCACCTACTTCTCCTTCTCCTTGTCAGGCCCAGGCT
CCCTCTCCTTCTTCCTCACGCCCCACCCCCACCCCGACCGCCACCCTTTCCTCCTCGCCA
TCGTCTTCGACGCCGCCGCCCGCGTCCGCATCGACCTCGCCGGCCATACTACGGGTACGG
CCGCCTCCCACCTCGCCCCCTCCTCCGCCCCCGCCCGCCTACATTCCTGGATACACTACA
ATGCCACCTCCGCCACGCTCCAGCTCCGCCTCTCCGCCACCTCCCGACGCCCCGCCCTCC
CGCTGCTCTCCCTCCACCCGCTTCCTCCCTCCGCCCTCCTCCTCCTCCGGACCAAGCCCA
TGCTCGCCGGCTTCACCTCCTCCGCCACCAACTGCACCCTCTTCGCATGGGCCTTCCGCG
CCAACAACACCATGCAGCACTCTCAGCCGCTCGACCCCTCCCACCTGCTCACCACGCCGC
CACCTCACCGCCCACAACCTCACCCCCACCATTATTACCCCTGGCTCTCGCTGCTCTTCG
CCGCCGCTTGTGGTGCCATGCTCACATTCTTCCTACTCTTCGTCTGGTACTCCCTGCTGG
CCACGCGCCGCCCTGTCGCACCAGTCACCACCTCCGATTCCGACGTCGTCTATGAGAAGA
TTGTGCTTGTCGGAGCCAAGGACGACGACGCCCCCGCAGCCACTACTCCGTCTCCAGATG
TAGCTGGTAACAACAACTAGTCTCTAGTCTTCTTTAGCTGTGCGCCTGTGCCTCTGTTAA
TTATTCATCACAGCACAGGGAGTATTTCCTCTTTTAATTATGCCCTCTCCCAGTCCCAGT
TCGAGTGTGTCATGTGTGAGTGCTGTCTGTAAGTAGTAGTACTAGTTAAGCGTGGTTTGG
TGGAAAATCTGCAGATTTTGCGGGCAAATCTAACACCGCAAACTCTGCAGTTTCTCCTCA
GATTATTAGAGGTTCAATTCAATCCTGTTTCATCCACTATCTTGTACTCCTAACTCCCAA
TCTGTCATCCACTACCTACTGCTGCT