Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0731900-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:31212465:31217518:1 gene:Os06g0731900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF707 family protein. (Os06t0731900-01);Similar to Lysine ketoglutarate reductase trans-splicing related 1. (Os06t0731900-02)
Sequence

ATGAAGCCTCCGCGGCGCCGCTATGGTTTACTCGCGGTGGTCGTCACTCTCATCGTCCTC
GCCTCCCTCCAGATCCAGTTCCACCACCTCAAGGAGGACCGTCTCACCGGGGACCGCACC
TTCGCCACCACCACCACCGACCCCGTTCACTGGCGGACCGGCGCCGAGGGCCTGCCACGC
GGCATTGTTCACTCCAACTCCGACATGTACCTCCGCCCTCTCTGGGACTCTGGCGCCAAC
CCCAAGAATAAAAACGATAATCACAATGCTCTTTTGGCGATGGCAGTCGGCATTTCACAA
ATGCAGAATGTAGACATTATGGCCCGTAAGTTTCTTAACCAAAACTACACAGTCATGCTC
TTCCATTATGACGGGAATGTAGATGGATGGCACAATCTTGAGTGGAGTGATAAGGCCATA
CACATACTTGCTCGTAACCAAACAAAGTGGTTTGCTAAGCGCTTTCTACATCCTGATGTT
GTGGCTATCTACGGTTTTATCTTTTTATGGGATGAAGACCTTGGAGTGGACAACTTTGAC
CCGAGAAGATATCTTGATATAATGGTTTCTGAAGGATTGGAAATTACACAACCTGCTCTG
GACCCTGATCTATCGACTGATATTCACCATCGGATCACAATCCGCAACAAGATGATGAAA
GTGCATAGGAGAATATATGATAACCGTGCAAGTATGAATTGTTCTGATGGAAGTAAAGGA
CCTCCATGCACAGGGTGGGTTGAGGGCATGGCACCTGTTTTTTCTCGGGCTGCTTGGAGA
TGTGTATGGCATTTGATTCAGAATGACCTGATCCATGGATGGGGCCTTGACATGAAGCTT
GGTTATTGTGCTCAGGGTGATCGAGCTGAGAAGGTTGGCGTAATCGACAGTGAGTATGTT
GTTCATCAAGGAATACCATCGTTAGGAGGACCATCACTAAGCAGTAAGACCCCTCGGAGA
TCTCTGGATTTACGGACCCACATTAGAAGACAATCGTCTGCTGAGCTGGAGAAGTTTAAA
GAGCGCTGGAACAGAGCTGTAAGGGAAGATGAAGAATGGACAGATCCTTTTGATACTTGA

Peptide Sequence

PEP ID

Os06t0731900-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:31212465:31217518:1 gene:Os06g0731900 transcript:Os06t0731900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF707 family protein. (Os06t0731900-01);Similar to Lysine ketoglutarate reductase trans-splicing related 1. (Os06t0731900-02)
Sequence

MKPPRRRYGLLAVVVTLIVLASLQIQFHHLKEDRLTGDRTFATTTTDPVHWRTGAEGLPR
GIVHSNSDMYLRPLWDSGANPKNKNDNHNALLAMAVGISQMQNVDIMARKFLNQNYTVML
FHYDGNVDGWHNLEWSDKAIHILARNQTKWFAKRFLHPDVVAIYGFIFLWDEDLGVDNFD
PRRYLDIMVSEGLEITQPALDPDLSTDIHHRITIRNKMMKVHRRIYDNRASMNCSDGSKG
PPCTGWVEGMAPVFSRAAWRCVWHLIQNDLIHGWGLDMKLGYCAQGDRAEKVGVIDSEYV
VHQGIPSLGGPSLSSKTPRRSLDLRTHIRRQSSAELEKFKERWNRAVREDEEWTDPFDT

Transcript Sequence

Transcript ID

Os06t0731900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:31212465:31217518:1 gene:Os06g0731900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF707 family protein. (Os06t0731900-01);Similar to Lysine ketoglutarate reductase trans-splicing related 1. (Os06t0731900-02)
Sequence

GGGGCGTGGGATCCCCTTCCGACCAAGGCAAGGCGAGGCGACCACCTGTCGCCGCCGCCG
CCGCCGCCATGAAGCCTCCGCGGCGCCGCTATGGTTTACTCGCGGTGGTCGTCACTCTCA
TCGTCCTCGCCTCCCTCCAGATCCAGTTCCACCACCTCAAGGAGGACCGTCTCACCGGGG
ACCGCACCTTCGCCACCACCACCACCGACCCCGTTCACTGGCGGACCGGCGCCGAGGGCC
TGCCACGCGGCATTGTTCACTCCAACTCCGACATGTACCTCCGCCCTCTCTGGGACTCTG
GCGCCAACCCCAAGAATAAAAACGATAATCACAATGCTCTTTTGGCGATGGCAGTCGGCA
TTTCACAAATGCAGAATGTAGACATTATGGCCCGTAAGTTTCTTAACCAAAACTACACAG
TCATGCTCTTCCATTATGACGGGAATGTAGATGGATGGCACAATCTTGAGTGGAGTGATA
AGGCCATACACATACTTGCTCGTAACCAAACAAAGTGGTTTGCTAAGCGCTTTCTACATC
CTGATGTTGTGGCTATCTACGGTTTTATCTTTTTATGGGATGAAGACCTTGGAGTGGACA
ACTTTGACCCGAGAAGATATCTTGATATAATGGTTTCTGAAGGATTGGAAATTACACAAC
CTGCTCTGGACCCTGATCTATCGACTGATATTCACCATCGGATCACAATCCGCAACAAGA
TGATGAAAGTGCATAGGAGAATATATGATAACCGTGCAAGTATGAATTGTTCTGATGGAA
GTAAAGGACCTCCATGCACAGGGTGGGTTGAGGGCATGGCACCTGTTTTTTCTCGGGCTG
CTTGGAGATGTGTATGGCATTTGATTCAGAATGACCTGATCCATGGATGGGGCCTTGACA
TGAAGCTTGGTTATTGTGCTCAGGGTGATCGAGCTGAGAAGGTTGGCGTAATCGACAGTG
AGTATGTTGTTCATCAAGGAATACCATCGTTAGGAGGACCATCACTAAGCAGTAAGACCC
CTCGGAGATCTCTGGATTTACGGACCCACATTAGAAGACAATCGTCTGCTGAGCTGGAGA
AGTTTAAAGAGCGCTGGAACAGAGCTGTAAGGGAAGATGAAGAATGGACAGATCCTTTTG
ATACTTGATTACTTTGAAAGAAGAATCCGATACAAATATACAAGCCCACCTGATACAAAT
ATACAAGCCCACCTCACATTAGAGTTGCAGGACAGTCCACATCGATTACAATAATTGGAC
TCGAGATCATCTCACATGGCAATCTGTGGGCTTCATAGTAAACGGTTTGTTACAGACATT
TATCTGACTAGCGTTCACCATTATGTCCTCAAGAGGTGAAGAGCCACTGGATACGGTACC
ATCAACACAAGGATCAAGGTGCAACTGAACGGCAACCCAAACTAACCAGAGACTTAACAC
AGTGTCTTGTAATTTAATTTAATTCCTCATTTCACTACGGGTGTATAGTGACATGATATA
CACACTTGTGCAGTTATCTTAATAGCAAGTTTCAAAG