Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0731700-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:31204042:31205929:-1 gene:Os06g0731700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os06t0731700-01)
Sequence

GATGCTGATGATGGAGTGGAGCGATTAGTGTCCAAGCACAGGTATGGGCGTCACACCGAT
TCTTTTCAACAAGGCAGACTTGCCACTGAGTCCATGGAGTCGCCTTTGCTAGAGAGGACG
CTCGAAATTCGGGACAGATCCTACAAGTTGAAGATTGAGAGCTGCCGCGGTAACAAGAGT
CAATCAAATGAAGCACAACAGAGGCCGTCTCATCACACTACTACTTCTGATAATATAGAT
GATGAAAGTAATGCCGTGGATTCAGATGGCGACGAGTTCAGCCACAATGTCATTGAGGCA
GCAGAGATTTTGAGGAAGGCGAGGGAATGCATGATGGCCAGAGATGATGAAGAGACTGCA
GATGCGCTGCTGTACAAATCAGCCAGGCTTCTTTCCACAGCTGTTGCTTTGAGGCCATCA
AGTTTAGTAGCGGTGGGTCAGCTAGGGAACACCTACCTACTCCATGGAGAGCTCAAGCTC
AAGGTTAGTCGCGAGCTGAGAACACTCTTGGCCAATACCGGTGCTCTTCTAAATGGAAGA
GACCGCGTCTCACGGTCCAGGAAGCTGGACAGAAGAATCTTAAGCAGAGAAAACATTTCG
TCTGCCTTAGTTGATGTTTGTGAAGAGTGTGAAAGCCTTCTTGTTGAGGCTGGGAGAAGC
TATCGGATGGCCCTATCGATTGATTCTGGTGACGTCAAGGCACTGTACAATTGGGGACTA
GCACTTATCTTTCGTGCCCAGCTACTTGCTGATATCGGACCGGAAGCAGCAATTGATGCT
GACCGAGTTTATTTGGCTGCAATCGATAAATTTGATGCGATGTTGTCCAAAAGCAACACA
TATGCTCCGGAAGCTCTCTACAGATGGGGCATTGCACTGCAGCAGCGATCCTATCTCCGT
TCTGGAAACAACAAGGAGAAGATGAGGCTCCTGGAGCAGGCAAAGAGTATGTTTGAAGAC
GTTCTGTATGTAGAAGCAGATAACAAGACGGTAAGAGAAGCGCTATCGTCATGCATAGCA
GAGCTCAACTACCATGGGCGATGGTTATAA

Peptide Sequence

PEP ID

Os06t0731700-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:31204042:31205929:-1 gene:Os06g0731700 transcript:Os06t0731700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os06t0731700-01)
Sequence

DADDGVERLVSKHRYGRHTDSFQQGRLATESMESPLLERTLEIRDRSYKLKIESCRGNKS
QSNEAQQRPSHHTTTSDNIDDESNAVDSDGDEFSHNVIEAAEILRKARECMMARDDEETA
DALLYKSARLLSTAVALRPSSLVAVGQLGNTYLLHGELKLKVSRELRTLLANTGALLNGR
DRVSRSRKLDRRILSRENISSALVDVCEECESLLVEAGRSYRMALSIDSGDVKALYNWGL
ALIFRAQLLADIGPEAAIDADRVYLAAIDKFDAMLSKSNTYAPEALYRWGIALQQRSYLR
SGNNKEKMRLLEQAKSMFEDVLYVEADNKTVREALSSCIAELNYHGRWL

Transcript Sequence

Transcript ID

Os06t0731700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:31204042:31205929:-1 gene:Os06g0731700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os06t0731700-01)
Sequence

ATGATGCTGATGATGGAGTGGAGCGATTAGTGTCCAAGCACAGGTATGGGCGTCACACCG
ATTCTTTTCAACAAGGCAGACTTGCCACTGAGTCCATGGAGTCGCCTTTGCTAGAGAGGA
CGCTCGAAATTCGGGACAGATCCTACAAGTTGAAGATTGAGAGCTGCCGCGGTAACAAGA
GTCAATCAAATGAAGCACAACAGAGGCCGTCTCATCACACTACTACTTCTGATAATATAG
ATGATGAAAGTAATGCCGTGGATTCAGATGGCGACGAGTTCAGCCACAATGTCATTGAGG
CAGCAGAGATTTTGAGGAAGGCGAGGGAATGCATGATGGCCAGAGATGATGAAGAGACTG
CAGATGCGCTGCTGTACAAATCAGCCAGGCTTCTTTCCACAGCTGTTGCTTTGAGGCCAT
CAAGTTTAGTAGCGGTGGGTCAGCTAGGGAACACCTACCTACTCCATGGAGAGCTCAAGC
TCAAGGTTAGTCGCGAGCTGAGAACACTCTTGGCCAATACCGGTGCTCTTCTAAATGGAA
GAGACCGCGTCTCACGGTCCAGGAAGCTGGACAGAAGAATCTTAAGCAGAGAAAACATTT
CGTCTGCCTTAGTTGATGTTTGTGAAGAGTGTGAAAGCCTTCTTGTTGAGGCTGGGAGAA
GCTATCGGATGGCCCTATCGATTGATTCTGGTGACGTCAAGGCACTGTACAATTGGGGAC
TAGCACTTATCTTTCGTGCCCAGCTACTTGCTGATATCGGACCGGAAGCAGCAATTGATG
CTGACCGAGTTTATTTGGCTGCAATCGATAAATTTGATGCGATGTTGTCCAAAAGCAACA
CATATGCTCCGGAAGCTCTCTACAGATGGGGCATTGCACTGCAGCAGCGATCCTATCTCC
GTTCTGGAAACAACAAGGAGAAGATGAGGCTCCTGGAGCAGGCAAAGAGTATGTTTGAAG
ACGTTCTGTATGTAGAAGCAGATAACAAGACGGTAAGAGAAGCGCTATCGTCATGCATAG
CAGAGCTCAACTACCATGGGCGATGGTTATAACCAAATTTGGTTGCGGGAAATGCTTCTT
GTGTGGAGTTTGATGATCCCTATTTTGTTGTCAATTGTCGTTGTACGCCTTCTTTCGTTT
CCTACGTGCAATTGGTATTCTGCCTTACCGAGTTACCGGTAAGTTGTGAATCTAGGATAC
TACTGTATTTGAGTATCAAATAAAACAATAAATAAATAAAAGCGATTGTGTG