Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0730800-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:31147957:31150545:1 gene:Os06g0730800 gene_biotype:protein_coding transcript_biotype:protein_coding description:mRNA splicing factor, Cwf18 family protein. (Os06t0730800-01)
Sequence

ATGGAAGACGCTGCCGCCCGCCGCGAGCGCTTGCGTGCCCTTCGCGCTGCCAAGGACCTC
CTCTCCACCCCCGACCCCGCCGCCGCCGGACAAGGACAACACCACCAAAATGGGAACCGT
GAGACAGCACCAGAACAAGCGGAGCATCCAACTTTACCAGCTCCTCTGGACGCACCTGAG
GAGGCCTCAAAGGAGAACATTAACCCCACTGACGAATCTGAGGAGGTTCAAAATGATGGT
GATATGCCAGCCATGAAGTTCAGAAACTACCTTCCTCATGATGAGCAACTTCGGGGTGGT
AAGGTGGCTCCAGTGTCCCTCCCAAAGTTTGAGGATCCAATTTCTGCTGAAACTACAGAG
CCAAAGCAAGTTGAGAACCCCTTTGGAAACATAGCTCCAAAGAATCCAAATTGGGATCTG
AAAAGAGATGTGCAGAAGAGGATGGACAAACTTGAGAAGCGCACGCAGAAAGCACTGGCT
GAGATTGCATTGGAACAACAAAAGGAGAAAGAAGCACTTGGGGAAGGAAGCGATGCAGCC
CAAGATTGA

Peptide Sequence

PEP ID

Os06t0730800-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:31147957:31150545:1 gene:Os06g0730800 transcript:Os06t0730800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:mRNA splicing factor, Cwf18 family protein. (Os06t0730800-01)
Sequence

MEDAAARRERLRALRAAKDLLSTPDPAAAGQGQHHQNGNRETAPEQAEHPTLPAPLDAPE
EASKENINPTDESEEVQNDGDMPAMKFRNYLPHDEQLRGGKVAPVSLPKFEDPISAETTE
PKQVENPFGNIAPKNPNWDLKRDVQKRMDKLEKRTQKALAEIALEQQKEKEALGEGSDAA
QD

Transcript Sequence

Transcript ID

Os06t0730800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:31147957:31150545:1 gene:Os06g0730800 gene_biotype:protein_coding transcript_biotype:protein_coding description:mRNA splicing factor, Cwf18 family protein. (Os06t0730800-01)
Sequence

ACGCACGTCAGAGCTCGCCTCGCCGCCGCCTGACCTCGCCTCGCCGTCGCGCCGCCGCCC
ACAGACACAGATCGATTCCCTCCGGCTCCGATATGGAAGACGCTGCCGCCCGCCGCGAGC
GCTTGCGTGCCCTTCGCGCTGCCAAGGACCTCCTCTCCACCCCCGACCCCGCCGCCGCCG
GACAAGGACAACACCACCAAAATGGGAACCGTGAGACAGCACCAGAACAAGCGGAGCATC
CAACTTTACCAGCTCCTCTGGACGCACCTGAGGAGGCCTCAAAGGAGAACATTAACCCCA
CTGACGAATCTGAGGAGGTTCAAAATGATGGTGATATGCCAGCCATGAAGTTCAGAAACT
ACCTTCCTCATGATGAGCAACTTCGGGGTGGTAAGGTGGCTCCAGTGTCCCTCCCAAAGT
TTGAGGATCCAATTTCTGCTGAAACTACAGAGCCAAAGCAAGTTGAGAACCCCTTTGGAA
ACATAGCTCCAAAGAATCCAAATTGGGATCTGAAAAGAGATGTGCAGAAGAGGATGGACA
AACTTGAGAAGCGCACGCAGAAAGCACTGGCTGAGATTGCATTGGAACAACAAAAGGAGA
AAGAAGCACTTGGGGAAGGAAGCGATGCAGCCCAAGATTGAGGGAGGGCTCAGGGGAGAT
GGATATGAAGTAGCTGAACCTTTGATATGTTAAGAATGCTCAAGGGGTGCACTGTGAACT
GATGAAAAGCTAATGGTAACATTCGGGGTCTAGCAATTAGTGTGCGACTATACGTTTGTA
AGCATGGAAAACCTTAATAAACCTGATTCAGGTTGCTAGACCCGTGTGCTCACTGCTTGA
TTAAGTGTAGTTAGGGGACTCGCATTGTACTACCCCCACCAAAATGTATGTTTGTGTTGT
GCTTAATTCTCTTGTAAGTCAACTGTGCTTAGATTCTGATGCTGCCTGCCATGGAAACCA
GTTAAACGTATTAATTTAACATATGCTTTAATTTCCT