Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0729650-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:31090188:31093308:-1 gene:Os06g0729650 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Photosystem II stability/assembly factor HCF136, chloroplastic. (Os06t0729650-00)
Sequence	ATGGCCACCACCGCCTCCCTCCACCTCCACCTCCACCTCCTCCTCTCCTCCTCCCGCCGC CGCTGCCGCCTCCTCGTCCCCCGTGCCCACACCGATTCCATCTCCACCGGCCGACGCCGC TTCATTGCCGACACCGCCACCGCCTCCGCTGCCGCTGCCGTGGGTCCCCTCGTCCTACCC CGGACCCCGCTTGCGCGTGCCGACCAGCCGCCGTCGCTCTCCGAGTGGGAGCGCGTCCTC CTCCCCATCGACCCCGGCGTCGTCCTCCTCGACATCGCCTTCGTCCCCGACGACCCTTCC CACGGTTTTCTTCTTGGGACGAGACAGACGATATTGGAAACAAAAAATGGAGGAAACACA TGGTTCCCTCGCTCCATCCCGTCCGCCGAGGATGAAGATTTCAACTACAGGTTCAATTCT GTAAGCTTCATGGGCAAAGAAGGATGGATTATTGGCAAGCCTGCAATTTTGTTGCACACT TCTGATGCTGGAGACAGCTGGGAAAGAATACCCTTGAGTGCCCAGCTTCCTGGGAACATG GTTTACATAAAAGCTACAGGTGAGCAAAGTGCAGAGATGGTCACCGACGAGGGAGCAATT TATGTTACTTCCAATCGAGGGTACAACTGGAAGGCCGCTGTGCAAGAGACTGTCTCAGCC ACTCTTAACAGAACAGTTTCAAGTGGAATTAGCGGAGCGAGTTACTACACTGGTACTTTC AACACAGTGAACCGGTCACCTGATGGGCGTTATGTTGCTGTCTCCAGCCGTGGGAACTTC TATCTGACCTGGGAACCTGGGCAGCCATTTTGGCAGCCACACAACAGGGCAGTGGCACGT AGAATACAGAATATGGGATGGAGAGCAGATGGTGGCCTTTGGCTTCTAGTGCGCGGTGGT GGACTCTTTCTGAGTAAAGGAAGTGGAATAACTGAAGACTTTGAGGAAGCGTCAGTGCAA AGCCGGGGGTTTGGAATTCTTGATGTTGGCTACCGCTCAAAGGATGAAGCATGGGCCGCC GGTGGAAGTGGTGTCCTGCTAAAAACAACAAATGGCGGGAAGACCTGGGTGCGCGACAAA GCTGCTGATAACATCGCAGCCAATCTCTACTCTGTAAAGTTCCTTGGTGACAACAAAGGA TACGTGCTTGGGAACGACGGCGTCTTGCTTCGATATGTTGGCTGA

Peptide Sequence

PEP ID	Os06t0729650-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:31090188:31093308:-1 gene:Os06g0729650 transcript:Os06t0729650-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Photosystem II stability/assembly factor HCF136, chloroplastic. (Os06t0729650-00)
Sequence	MATTASLHLHLHLLLSSSRRRCRLLVPRAHTDSISTGRRRFIADTATASAAAAVGPLVLP RTPLARADQPPSLSEWERVLLPIDPGVVLLDIAFVPDDPSHGFLLGTRQTILETKNGGNT WFPRSIPSAEDEDFNYRFNSVSFMGKEGWIIGKPAILLHTSDAGDSWERIPLSAQLPGNM VYIKATGEQSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTF NTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGG GLFLSKGSGITEDFEEASVQSRGFGILDVGYRSKDEAWAAGGSGVLLKTTNGGKTWVRDK AADNIAANLYSVKFLGDNKGYVLGNDGVLLRYVG

Transcript Sequence

Transcript ID	Os06t0729650-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:31090188:31093308:-1 gene:Os06g0729650 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Photosystem II stability/assembly factor HCF136, chloroplastic. (Os06t0729650-00)
Sequence	CACGGCCTCCCGCTTCCACGTCTCATCTGCCATGGCCACCACCGCCTCCCTCCACCTCCA CCTCCACCTCCTCCTCTCCTCCTCCCGCCGCCGCTGCCGCCTCCTCGTCCCCCGTGCCCA CACCGATTCCATCTCCACCGGCCGACGCCGCTTCATTGCCGACACCGCCACCGCCTCCGC TGCCGCTGCCGTGGGTCCCCTCGTCCTACCCCGGACCCCGCTTGCGCGTGCCGACCAGCC GCCGTCGCTCTCCGAGTGGGAGCGCGTCCTCCTCCCCATCGACCCCGGCGTCGTCCTCCT CGACATCGCCTTCGTCCCCGACGACCCTTCCCACGGTTTTCTTCTTGGGACGAGACAGAC GATATTGGAAACAAAAAATGGAGGAAACACATGGTTCCCTCGCTCCATCCCGTCCGCCGA GGATGAAGATTTCAACTACAGGTTCAATTCTGTAAGCTTCATGGGCAAAGAAGGATGGAT TATTGGCAAGCCTGCAATTTTGTTGCACACTTCTGATGCTGGAGACAGCTGGGAAAGAAT ACCCTTGAGTGCCCAGCTTCCTGGGAACATGGTTTACATAAAAGCTACAGGTGAGCAAAG TGCAGAGATGGTCACCGACGAGGGAGCAATTTATGTTACTTCCAATCGAGGGTACAACTG GAAGGCCGCTGTGCAAGAGACTGTCTCAGCCACTCTTAACAGAACAGTTTCAAGTGGAAT TAGCGGAGCGAGTTACTACACTGGTACTTTCAACACAGTGAACCGGTCACCTGATGGGCG TTATGTTGCTGTCTCCAGCCGTGGGAACTTCTATCTGACCTGGGAACCTGGGCAGCCATT TTGGCAGCCACACAACAGGGCAGTGGCACGTAGAATACAGAATATGGGATGGAGAGCAGA TGGTGGCCTTTGGCTTCTAGTGCGCGGTGGTGGACTCTTTCTGAGTAAAGGAAGTGGAAT AACTGAAGACTTTGAGGAAGCGTCAGTGCAAAGCCGGGGGTTTGGAATTCTTGATGTTGG CTACCGCTCAAAGGATGAAGCATGGGCCGCCGGTGGAAGTGGTGTCCTGCTAAAAACAAC AAATGGCGGGAAGACCTGGGTGCGCGACAAAGCTGCTGATAACATCGCAGCCAATCTCTA CTCTGTAAAGTTCCTTGGTGACAACAAAGGATACGTGCTTGGGAACGACGGCGTCTTGCT TCGATATGTTGGCTGACGTGCAAAGTGCTTCAGTTTGCCTGTATCGTCCTTAGACTTTTT TGTACGTAATATGAACCTACACTTGTTTACACGGTCAGGTATCTATCTATGTACCTACTG CAAAAGGCTGCTGATTCGTGTTGAATTCATCCACAAAAGAGTGTAAATTCTTGTCTGTAA CTGTAGCGACTGTTCCAATATGTGAACTGCACATCCACATGTAATATCTGATATATATAA AATGGAGCTTGTAAAGTGAGAAGGATTC