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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0729400-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:31082752:31083640:1 gene:Os06g0729400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Gibberellin-regulated protein 2 precursor. (Os06t0729400-01)
Sequence

ATGGCCTCCTCCGGCTCCAAGTCCAAGACCAACAATGGCTTCTTCGTCCCTTCTCCTGCA
ACTGCAATGGCGCCATGCTTCCTCCTCTTGCTCATCTTCTTCTTCCTCCATGTCGATGCT
TCTGCTGCTGCTGCTTCTTCTTCTTCCCATCCACAGCTGGTGCAGCAGATGCAGGTGAAG
AGGGCGAGATCCCTCCTGCAGGCTCCAAAGATAGACTGCCAGGGGACGTGCTCGGGGCGA
TGCGCCAACAACTGGAAGAAGGAGATGTGCAACAAGATGTGCAACGTCTGCTGCAACCGA
TGCAACTGCGTTCCCCCGGGAAGTGGGCAGGACACCCGCCACCTCTGCCCTTGCTACGAC
ACCATGGTTAATCCACACAACGGCAAGCTCAAGTGCCCATGA

Peptide Sequence

PEP ID

Os06t0729400-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:31082752:31083640:1 gene:Os06g0729400 transcript:Os06t0729400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Gibberellin-regulated protein 2 precursor. (Os06t0729400-01)
Sequence

MASSGSKSKTNNGFFVPSPATAMAPCFLLLLIFFFLHVDASAAAASSSSHPQLVQQMQVK
RARSLLQAPKIDCQGTCSGRCANNWKKEMCNKMCNVCCNRCNCVPPGSGQDTRHLCPCYD
TMVNPHNGKLKCP

Transcript Sequence

Transcript ID

Os06t0729400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:31082752:31083640:1 gene:Os06g0729400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Gibberellin-regulated protein 2 precursor. (Os06t0729400-01)
Sequence

AGCTAAACCCTGTCCCTTGTTAATTCTTCTTCTTCTTCCTAACTACTCCAAGCTAGCTCA
GAATCAGATCCATCCATGGCCTCCTCCGGCTCCAAGTCCAAGACCAACAATGGCTTCTTC
GTCCCTTCTCCTGCAACTGCAATGGCGCCATGCTTCCTCCTCTTGCTCATCTTCTTCTTC
CTCCATGTCGATGCTTCTGCTGCTGCTGCTTCTTCTTCTTCCCATCCACAGCTGGTGCAG
CAGATGCAGGTGAAGAGGGCGAGATCCCTCCTGCAGGCTCCAAAGATAGACTGCCAGGGG
ACGTGCTCGGGGCGATGCGCCAACAACTGGAAGAAGGAGATGTGCAACAAGATGTGCAAC
GTCTGCTGCAACCGATGCAACTGCGTTCCCCCGGGAAGTGGGCAGGACACCCGCCACCTC
TGCCCTTGCTACGACACCATGGTTAATCCACACAACGGCAAGCTCAAGTGCCCATGATTC
CTTCCTTCCTATTAGCTGCTGCTATTGCTCTCAGAGAGATCAGAGTACAATGTACTTGGT
AGTATGTGTACGTATGTGTTCCATGCATCTTGATGTTCAATCCCTACATCTCTCTGGCTG
TCACTACTAGCTTAGCTACTACATAGGACTGCTCTATATAATAGATGCCTTTCTACTTTC
TTCAATCTCCAGCACCAGGAATAAAACAAACATATCATGATTCTCTTCT