Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0729300-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:31069076:31077365:1 gene:Os06g0729300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARGONAUTE 1D description:Similar to AGO1 homologous protein. (Os06t0729300-01);Similar to Protein argonaute 1D. (Os06t0729300-02)
Sequence	ATGGGATCAAGGAGACCAAGACTGCCTGGGTTTGGTGAGGACTGTGAGCCTCGTGGTGGT GGGAGAGGAGGAGGTGGCCGTGGCCGTGGCAGCTACTACCCACAGGCACAGCAATACCAC CCACAAGGACATGGTGGCCGTGGAGGAGCAGGCTACTACCATGGTGCTGCTCCTCAACCT CGCGGCGCAATGGTGGTGCAGCAATGGCGTCCTGCTACTGCTGCTGCTGAGCATTTGGGC CATCAACAGCCCTACAACAGCAGTGTGAGACCACAGCACTATTATGGTCCGTCTGCCATA GCTCCCGAGCTGCTCCAAGCAATGGATGCTCCACATGAGCCTCCTGCCAATGTCTCCTCA CCAGAAGCAGCCTCTCCGGAGGCATCATCACCACGGTCTCTTGCTCTTGAGGTCACAGAG CAGCTTCAGGACTTGTCTGTGCAGTACCAATTAAGTGAGAGCCAGGAAGAGATTGTCCAA CATGTTCCTGTGTCCACCAAATCATTTAAATTTCCTCACCGCCCTGGAAGTGGGAGTATT GGAACCAGATGTTTAGTGAAGGCGAATCACTTCTTTGCTCAACTGCCAGACAAGGATCTT CATCAGTATGACGTTTCAATCACCCCGGAGCTTACATCACGAATTCGGAGCCGTGCTGTG ATGGAAGAGTTGGTGAGACTGCACAAGATGTCATACTTGGGAGGACGTCTTCCAGCCTAT GATGGTAGGAAGAGCCTTTACACGGCCGGTCCATTGCCGTTTACTTCAAAAGAATTTCGC ATCTCTTTGCTTGAGGAAGATGATGGTTCTGGTTCGGAGAGGCGTCAGAAAACATATAAC GTGGTGATTAAGTTTGCTGCAAGAGCTGATCTTCACCGTCTTGAGCAATTTCTAGCTGGA AGGCAGGCAGAGGCTCCCCAGGAGGCCTTGCAAGTTCTTGATATTGTCTTGCGAGAGTTG CCAACAGCAAGATATGCACCCTTTGGTCGATCCTTCTTCTCTCCTGACCTGGGGAGGAGA CGATCCCTCGGTGAGGGACTAGAAACCTGGCGTGGGTTTTATCAGAGCATTCGTCCTACT CAAATGGGCTTGTCACTGAATATTGATATGTCGGCAACTGCTTTCTTTGAGCCGTTACCA GTCATAGATTTTGTCATACAGCTTTTAAATACTGACATCCGCTCGAGGCCCTTATCAGAT GCTGAGCGTGTCAAGATCAAGAAGGCCTTAAGAGGAGTGAAGGTAGGAGTTACTCACCGT GGCAACATGCGCCGGAAGTATCGGATATCTGGTTTGACATCTCAGGCAACTCGGGAACTG ACTTTTCCTGTTGATCAAGGAGGCACAGTGAAATCTGTTGTACAATATTTTCAAGAGACA TATGGATTTGCGATCCAGCATACCTATCTTCCTTGTCTGCAAGTTGGCAATCAGCAGCGT CCAAATTACCTACCAATGGAGGTCTGCAAAATAGTGGAAGGACAGAGGTACTCCAAGAGA CTGAACCAGAATCAGATAAGGGCTCTTTTAGAGGAGACATGTCAGCGCCCACACGATAGG GAGCGTGACATAATTCAGATGGTGAATCACAACTCCTACCATGAAGATCCTTATGCAAAG GAGTTTGGCATTAAGATCAGCGAGCGTCTGGCCTTGGTTGAGGCACGGATTTTACCTGCC CCTCGGCTCAAGTATAATGAGACTGGCAGAGAGAAGGATTGCTTGCCTAGAGTTGGTCAG TGGAATATGATGAACAAGAAAATGGTAAATGGTGGTAGAGTCAGGAGCTGGATATGTGTC AATTTTGCTCGAAATGTGCAAGAGAGTGTTGCTAGTGGATTTTGTCGTGAACTGGCCCGC ATGTGCCAGGCCTCAGGAATGGACTTTGCTTTGGAGCCTGTTCTTCCATCTATGTATGCA CGTCCTGATCAAGTGGAACGAGCTCTGAAAGCCAGGTTCCATGATGCAATGAACATACTT GGGCCACAGCACAAGGAGCTCGATTTACTTATCGGACTGCTTCCTGATAACAATGGTTCT CTTTATGGTGATTTGAAGCGTATATGCGAAATTGACCTTGGATTGGTTTCCCAGTGCTGT TGCACAAAGCAAGTGTTTAAAATGAACAAACAAATCCTAGCAAATCTTGCTCTGAAGATA AATGTGAAGGTTGGGGGAAGGAACACTGTACTGGTTGATGCAGTGTCGAGACGCATTCCG TTGGTAACTGACAGGCCTACTATTATATTCGGTGCTGATGTCACCCATCCTCACCCTGGC GAAGATAGCAGCCCATCCATTGCTGCTGTTGTGGCCTCCCAAGATTGGCCTGAAGTGACA AAGTATGCTGGTTTAGTTTCTGCTCAATCTCACAGACAAGAGTTAATAGATGATCTGTAT AACATCACGCATGATCCTCATAGAGGGCCCATCTGCGGTGGAATGGTCAGGGAACTTCTT ATATCCTTCAAAAGATCAACTGGTCAAAAGCCTCAACGGATAATATTCTATAGGGATGGT GTTAGTGAAGGGCAATTTTACCAGGTTCTATTGCATGAGCTTGATGCAATCCGAAAGGCT TGTGCATCACTCGAAGCAAATTACCAACCGCAGGTGACTTTCATTGTGGTTCAGAAGCGC CACCACACGAGATTATTTGCACACAACCACAATGATCAGAATTCAGTCGACAGGAGTGGG AACATATTGCCTGGTACTGTTGTTGACTCCAAGATTTGCCATCCTACGGAGTTTGACTTC TTCTTGTGCAGCCATGCTGGAATCAAGGGCACAAGCCGTCCCGCTCATTACCACGTCCTG TGGGATGAAAACAACTTCACAGCTGATGCGTTGCAGACCCTCACCAACAACCTCTGTTAC ACTTATGCGAGGTGCACACGATCCGTATCTATTGTTCCACCAGCATACTATGCTCATCTG GCGGCGTTCAGAGCCCGTTTCTACATGGAGTCAGATAGCTCGGACAGTGGTTCAATGGCG AGTGGTCGTGGAGGAGGTTCGTCTACATCGCGCAGCACTCGTGCTGCAGGTGGTGGAGCC GTCAGGCCCCTTCCTGCACTCAAGGACAGCGTCAAGAATGTCATGTTCTACTGTTAG

Peptide Sequence

PEP ID	Os06t0729300-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:31069076:31077365:1 gene:Os06g0729300 transcript:Os06t0729300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARGONAUTE 1D description:Similar to AGO1 homologous protein. (Os06t0729300-01);Similar to Protein argonaute 1D. (Os06t0729300-02)
Sequence	MGSRRPRLPGFGEDCEPRGGGRGGGGRGRGSYYPQAQQYHPQGHGGRGGAGYYHGAAPQP RGAMVVQQWRPATAAAEHLGHQQPYNSSVRPQHYYGPSAIAPELLQAMDAPHEPPANVSS PEAASPEASSPRSLALEVTEQLQDLSVQYQLSESQEEIVQHVPVSTKSFKFPHRPGSGSI GTRCLVKANHFFAQLPDKDLHQYDVSITPELTSRIRSRAVMEELVRLHKMSYLGGRLPAY DGRKSLYTAGPLPFTSKEFRISLLEEDDGSGSERRQKTYNVVIKFAARADLHRLEQFLAG RQAEAPQEALQVLDIVLRELPTARYAPFGRSFFSPDLGRRRSLGEGLETWRGFYQSIRPT QMGLSLNIDMSATAFFEPLPVIDFVIQLLNTDIRSRPLSDAERVKIKKALRGVKVGVTHR GNMRRKYRISGLTSQATRELTFPVDQGGTVKSVVQYFQETYGFAIQHTYLPCLQVGNQQR PNYLPMEVCKIVEGQRYSKRLNQNQIRALLEETCQRPHDRERDIIQMVNHNSYHEDPYAK EFGIKISERLALVEARILPAPRLKYNETGREKDCLPRVGQWNMMNKKMVNGGRVRSWICV NFARNVQESVASGFCRELARMCQASGMDFALEPVLPSMYARPDQVERALKARFHDAMNIL GPQHKELDLLIGLLPDNNGSLYGDLKRICEIDLGLVSQCCCTKQVFKMNKQILANLALKI NVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVT KYAGLVSAQSHRQELIDDLYNITHDPHRGPICGGMVRELLISFKRSTGQKPQRIIFYRDG VSEGQFYQVLLHELDAIRKACASLEANYQPQVTFIVVQKRHHTRLFAHNHNDQNSVDRSG NILPGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCY TYARCTRSVSIVPPAYYAHLAAFRARFYMESDSSDSGSMASGRGGGSSTSRSTRAAGGGA VRPLPALKDSVKNVMFYC

Transcript Sequence

Transcript ID	Os06t0729300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:31069076:31077365:1 gene:Os06g0729300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARGONAUTE 1D description:Similar to AGO1 homologous protein. (Os06t0729300-01);Similar to Protein argonaute 1D. (Os06t0729300-02)
Sequence	GGTAGAAGCAGAGGTAAGCAGGGCAGAGAGTAGAAACAGGAGCACTGCATTACTGGTAGT GGGAGCGTAAAGCTCTCTCCTCTCTTCTTCTTCTTCTTCTTGGCGTTTTCCCTCATCTCC TTCTACTAGTACTAGTACATCACCCTCCCACTCTTCTTCATCTTCCGCCCAGCGAGGTTC GTCTGGATGTGAGCTGAATCTCTCCGTCTGCCCAAGTTGATTGAGTTGGTCGACTGAATG GGATCAAGGAGACCAAGACTGCCTGGGTTTGGTGAGGACTGTGAGCCTCGTGGTGGTGGG AGAGGAGGAGGTGGCCGTGGCCGTGGCAGCTACTACCCACAGGCACAGCAATACCACCCA CAAGGACATGGTGGCCGTGGAGGAGCAGGCTACTACCATGGTGCTGCTCCTCAACCTCGC GGCGCAATGGTGGTGCAGCAATGGCGTCCTGCTACTGCTGCTGCTGAGCATTTGGGCCAT CAACAGCCCTACAACAGCAGTGTGAGACCACAGCACTATTATGGTCCGTCTGCCATAGCT CCCGAGCTGCTCCAAGCAATGGATGCTCCACATGAGCCTCCTGCCAATGTCTCCTCACCA GAAGCAGCCTCTCCGGAGGCATCATCACCACGGTCTCTTGCTCTTGAGGTCACAGAGCAG CTTCAGGACTTGTCTGTGCAGTACCAATTAAGTGAGAGCCAGGAAGAGATTGTCCAACAT GTTCCTGTGTCCACCAAATCATTTAAATTTCCTCACCGCCCTGGAAGTGGGAGTATTGGA ACCAGATGTTTAGTGAAGGCGAATCACTTCTTTGCTCAACTGCCAGACAAGGATCTTCAT CAGTATGACGTTTCAATCACCCCGGAGCTTACATCACGAATTCGGAGCCGTGCTGTGATG GAAGAGTTGGTGAGACTGCACAAGATGTCATACTTGGGAGGACGTCTTCCAGCCTATGAT GGTAGGAAGAGCCTTTACACGGCCGGTCCATTGCCGTTTACTTCAAAAGAATTTCGCATC TCTTTGCTTGAGGAAGATGATGGTTCTGGTTCGGAGAGGCGTCAGAAAACATATAACGTG GTGATTAAGTTTGCTGCAAGAGCTGATCTTCACCGTCTTGAGCAATTTCTAGCTGGAAGG CAGGCAGAGGCTCCCCAGGAGGCCTTGCAAGTTCTTGATATTGTCTTGCGAGAGTTGCCA ACAGCAAGATATGCACCCTTTGGTCGATCCTTCTTCTCTCCTGACCTGGGGAGGAGACGA TCCCTCGGTGAGGGACTAGAAACCTGGCGTGGGTTTTATCAGAGCATTCGTCCTACTCAA ATGGGCTTGTCACTGAATATTGATATGTCGGCAACTGCTTTCTTTGAGCCGTTACCAGTC ATAGATTTTGTCATACAGCTTTTAAATACTGACATCCGCTCGAGGCCCTTATCAGATGCT GAGCGTGTCAAGATCAAGAAGGCCTTAAGAGGAGTGAAGGTAGGAGTTACTCACCGTGGC AACATGCGCCGGAAGTATCGGATATCTGGTTTGACATCTCAGGCAACTCGGGAACTGACT TTTCCTGTTGATCAAGGAGGCACAGTGAAATCTGTTGTACAATATTTTCAAGAGACATAT GGATTTGCGATCCAGCATACCTATCTTCCTTGTCTGCAAGTTGGCAATCAGCAGCGTCCA AATTACCTACCAATGGAGGTCTGCAAAATAGTGGAAGGACAGAGGTACTCCAAGAGACTG AACCAGAATCAGATAAGGGCTCTTTTAGAGGAGACATGTCAGCGCCCACACGATAGGGAG CGTGACATAATTCAGATGGTGAATCACAACTCCTACCATGAAGATCCTTATGCAAAGGAG TTTGGCATTAAGATCAGCGAGCGTCTGGCCTTGGTTGAGGCACGGATTTTACCTGCCCCT CGGCTCAAGTATAATGAGACTGGCAGAGAGAAGGATTGCTTGCCTAGAGTTGGTCAGTGG AATATGATGAACAAGAAAATGGTAAATGGTGGTAGAGTCAGGAGCTGGATATGTGTCAAT TTTGCTCGAAATGTGCAAGAGAGTGTTGCTAGTGGATTTTGTCGTGAACTGGCCCGCATG TGCCAGGCCTCAGGAATGGACTTTGCTTTGGAGCCTGTTCTTCCATCTATGTATGCACGT CCTGATCAAGTGGAACGAGCTCTGAAAGCCAGGTTCCATGATGCAATGAACATACTTGGG CCACAGCACAAGGAGCTCGATTTACTTATCGGACTGCTTCCTGATAACAATGGTTCTCTT TATGGTGATTTGAAGCGTATATGCGAAATTGACCTTGGATTGGTTTCCCAGTGCTGTTGC ACAAAGCAAGTGTTTAAAATGAACAAACAAATCCTAGCAAATCTTGCTCTGAAGATAAAT GTGAAGGTTGGGGGAAGGAACACTGTACTGGTTGATGCAGTGTCGAGACGCATTCCGTTG GTAACTGACAGGCCTACTATTATATTCGGTGCTGATGTCACCCATCCTCACCCTGGCGAA GATAGCAGCCCATCCATTGCTGCTGTTGTGGCCTCCCAAGATTGGCCTGAAGTGACAAAG TATGCTGGTTTAGTTTCTGCTCAATCTCACAGACAAGAGTTAATAGATGATCTGTATAAC ATCACGCATGATCCTCATAGAGGGCCCATCTGCGGTGGAATGGTCAGGGAACTTCTTATA TCCTTCAAAAGATCAACTGGTCAAAAGCCTCAACGGATAATATTCTATAGGGATGGTGTT AGTGAAGGGCAATTTTACCAGGTTCTATTGCATGAGCTTGATGCAATCCGAAAGGCTTGT GCATCACTCGAAGCAAATTACCAACCGCAGGTGACTTTCATTGTGGTTCAGAAGCGCCAC CACACGAGATTATTTGCACACAACCACAATGATCAGAATTCAGTCGACAGGAGTGGGAAC ATATTGCCTGGTACTGTTGTTGACTCCAAGATTTGCCATCCTACGGAGTTTGACTTCTTC TTGTGCAGCCATGCTGGAATCAAGGGCACAAGCCGTCCCGCTCATTACCACGTCCTGTGG GATGAAAACAACTTCACAGCTGATGCGTTGCAGACCCTCACCAACAACCTCTGTTACACT TATGCGAGGTGCACACGATCCGTATCTATTGTTCCACCAGCATACTATGCTCATCTGGCG GCGTTCAGAGCCCGTTTCTACATGGAGTCAGATAGCTCGGACAGTGGTTCAATGGCGAGT GGTCGTGGAGGAGGTTCGTCTACATCGCGCAGCACTCGTGCTGCAGGTGGTGGAGCCGTC AGGCCCCTTCCTGCACTCAAGGACAGCGTCAAGAATGTCATGTTCTACTGTTAGAATTCT ACTACTGCTTCGCTTGGCTACTACTATCAGTTAGCCTTTAAATTGCCTCCCATTTGATTG CACTTAGTTGTTCATCATGGGAAGCCTCAAATAAGAAGTATGCAAGACTTCTGAAGCCAC ATGCTATCATGTTGTGTGTTTCTGGGACACACCATTCTATTTCACATTATCTGTAGACTC TATCCCACTATTTCATAAAAGCTGGGCTTCCCCTGGCTCTATTTGTACTCTAATTCGTAT GGACCTGTTTCATCATTTCAAAATGGTCAATTGTCTTGTTTGC