Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0729000-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:31051983:31055919:-1 gene:Os06g0729000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHYTOENE SYNTHASE 1 description:Phytoene synthase 1 (EC 2.5.1.32). (Os06t0729000-01);Similar to Phytoene synthase. (Os06t0729000-02);Similar to Phytoene synthase. (Os06t0729000-03)
Sequence	ATGGCGGCCATCACGCTCCTACGTTCAGCGTCTCTTCCGGGCCTCTCCGACGCCCTCGCC CGGGACGCTGCTGCCGTCCAACATGTCTGCTCCTCCTACCTGCCCAACAACAAGGAGAAG AAGAGGAGGTGGATCCTCTGCTCGCTCAAGTACGCCTGCCTTGGCGTCGACCCTGCCCCG GGCGAGATTGCCCGGACCTCGCCGGTGTACTCCAGCCTCACCGTCACCCCTGCTGGAGAG GCCGTCATCTCCTCGGAGCAGAAGGTGTACGACGTCGTCCTCAAGCAGGCAGCATTGCTC AAACGCCACCTGCGCCCACAACCACACACCATTCCCATCGTTCCCAAGGACCTGGACCTG CCAAGAAACGGCCTCAAGCAGGCCTATCATCGCTGCGGAGAGATCTGCGAGGAGTATGCC AAGACCTTTTACCTTGGAACTATGCTCATGACGGAGGACCGACGGCGCGCCATATGGGCC ATCTATGTGTGGTGTAGGAGGACAGATGAGCTTGTAGATGGACCAAATGCCTCGCACATC ACACCGTCAGCCCTGGACCGGTGGGAGAAGAGGCTTGATGATCTCTTCACCGGACGCCCC TACGACATGCTTGATGCTGCACTTTCTGATACCATCTCCAAGTTTCCTATAGATATTCAG CCTTTCAGGGACATGATAGAAGGGATGCGGTCAGACCTCAGAAAGACTAGATACAAGAAC TTCGACGAGCTCTACATGTACTGCTACTATGTTGCTGGAACTGTGGGGCTAATGAGTGTT CCTGTGATGGGTATTGCACCCGAGTCGAAGGCAACAACTGAAAGTGTGTACAGTGCTGCT TTGGCTCTCGGCATTGCAAACCAGCTCACAAATATACTCCGTGACGTTGGAGAGGACGCG AGAAGAGGGAGGATATATTTACCACAAGATGAACTTGCAGAGGCAGGGCTCTCTGATGAG GACATCTTCAATGGCGTTGTGACTAACAAATGGAGAAGCTTCATGAAGAGACAGATCAAG AGAGCTAGGATGTTTTTTGAGGAGGCAGAGAGAGGGGTGACCGAGCTCAGCCAGGCAAGC CGGTGGCCGGTCTGGGCGTCTCTGTTGTTATACCGGCAAATCCTTGACGAGATAGAAGCA AACGATTACAACAACTTCACAAAGAGGGCGTACGTTGGGAAGGCGAAGAAATTGCTAGCG CTTCCAGTTGCATATGGTAGATCATTGCTGATGCCCTACTCACTGAGAAATAGCCAGAAG TAG

Peptide Sequence

PEP ID	Os06t0729000-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:31051983:31055919:-1 gene:Os06g0729000 transcript:Os06t0729000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHYTOENE SYNTHASE 1 description:Phytoene synthase 1 (EC 2.5.1.32). (Os06t0729000-01);Similar to Phytoene synthase. (Os06t0729000-02);Similar to Phytoene synthase. (Os06t0729000-03)
Sequence	MAAITLLRSASLPGLSDALARDAAAVQHVCSSYLPNNKEKKRRWILCSLKYACLGVDPAP GEIARTSPVYSSLTVTPAGEAVISSEQKVYDVVLKQAALLKRHLRPQPHTIPIVPKDLDL PRNGLKQAYHRCGEICEEYAKTFYLGTMLMTEDRRRAIWAIYVWCRRTDELVDGPNASHI TPSALDRWEKRLDDLFTGRPYDMLDAALSDTISKFPIDIQPFRDMIEGMRSDLRKTRYKN FDELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDA RRGRIYLPQDELAEAGLSDEDIFNGVVTNKWRSFMKRQIKRARMFFEEAERGVTELSQAS RWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKLLALPVAYGRSLLMPYSLRNSQK

Transcript Sequence

Transcript ID	Os06t0729000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:31051983:31055919:-1 gene:Os06g0729000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHYTOENE SYNTHASE 1 description:Phytoene synthase 1 (EC 2.5.1.32). (Os06t0729000-01);Similar to Phytoene synthase. (Os06t0729000-02);Similar to Phytoene synthase. (Os06t0729000-03)
Sequence	ATAGCCATAGCTCATCATCCACCCTCTCTTCCTTCCTTCCTTCCTTCCTTCCACACAGAC CAGACCAGGCATCCCGACACTACACGCAGACTCTCGACTTTGTCACTAGCATCATTGCTT GATGATCGATGCTGAGCTGCAACCAAGCACCAGCATATCCTTTCCTTCATTCCTTCCTGG TGCTGGTAGAAGAAGAACAAGCTAGCTAGAGTGATAAGAGCTAGCTACCTTGCAGATCGA TCTCCGGCCAGCGATTGATCCCATCCAGTATAATAATGGCGGCCATCACGCTCCTACGTT CAGCGTCTCTTCCGGGCCTCTCCGACGCCCTCGCCCGGGACGCTGCTGCCGTCCAACATG TCTGCTCCTCCTACCTGCCCAACAACAAGGAGAAGAAGAGGAGGTGGATCCTCTGCTCGC TCAAGTACGCCTGCCTTGGCGTCGACCCTGCCCCGGGCGAGATTGCCCGGACCTCGCCGG TGTACTCCAGCCTCACCGTCACCCCTGCTGGAGAGGCCGTCATCTCCTCGGAGCAGAAGG TGTACGACGTCGTCCTCAAGCAGGCAGCATTGCTCAAACGCCACCTGCGCCCACAACCAC ACACCATTCCCATCGTTCCCAAGGACCTGGACCTGCCAAGAAACGGCCTCAAGCAGGCCT ATCATCGCTGCGGAGAGATCTGCGAGGAGTATGCCAAGACCTTTTACCTTGGAACTATGC TCATGACGGAGGACCGACGGCGCGCCATATGGGCCATCTATGTGTGGTGTAGGAGGACAG ATGAGCTTGTAGATGGACCAAATGCCTCGCACATCACACCGTCAGCCCTGGACCGGTGGG AGAAGAGGCTTGATGATCTCTTCACCGGACGCCCCTACGACATGCTTGATGCTGCACTTT CTGATACCATCTCCAAGTTTCCTATAGATATTCAGCCTTTCAGGGACATGATAGAAGGGA TGCGGTCAGACCTCAGAAAGACTAGATACAAGAACTTCGACGAGCTCTACATGTACTGCT ACTATGTTGCTGGAACTGTGGGGCTAATGAGTGTTCCTGTGATGGGTATTGCACCCGAGT CGAAGGCAACAACTGAAAGTGTGTACAGTGCTGCTTTGGCTCTCGGCATTGCAAACCAGC TCACAAATATACTCCGTGACGTTGGAGAGGACGCGAGAAGAGGGAGGATATATTTACCAC AAGATGAACTTGCAGAGGCAGGGCTCTCTGATGAGGACATCTTCAATGGCGTTGTGACTA ACAAATGGAGAAGCTTCATGAAGAGACAGATCAAGAGAGCTAGGATGTTTTTTGAGGAGG CAGAGAGAGGGGTGACCGAGCTCAGCCAGGCAAGCCGGTGGCCGGTCTGGGCGTCTCTGT TGTTATACCGGCAAATCCTTGACGAGATAGAAGCAAACGATTACAACAACTTCACAAAGA GGGCGTACGTTGGGAAGGCGAAGAAATTGCTAGCGCTTCCAGTTGCATATGGTAGATCAT TGCTGATGCCCTACTCACTGAGAAATAGCCAGAAGTAGGAGGCGGGAAGAGGAGATAAAG GGAAGATGATGAGCAGGTTAGGCTTAGATAGGAAAAATCAGACAGCATCTGCCTTCCGAT TAATGTTGAGGAAATTATATTATTGTGTGTATCATACATAGCATGTATAGGGAAAATGCT GCAGGCAGGCAGGCAGGCTAGGTGATGGTTGAATATTTCCTTCACATCATGTATGTATAT CCTTCCTTGATGCTACAGCACATATGTATGTATGACTCTGAAGAAAGAGCAACCTGTATA GTAGCTAACCGGCTATGGCCTATGTATGGGCCGCAGAGGTGAGCAAACAAAAATCATCAT CCATGGATTGATTGATTGATTGATTGATACAGTACTAC