Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0728700-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:31025972:31028984:-1 gene:Os06g0728700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os06t0728700-01)
Sequence	ATGGCTTCCATGCCGCAGCTGGAGGAAAAGGATTCATCCGATTTGGCAATCAACAAAGGC CCGTCGCTGGATCTTGTCAAATCTCCCTTGATGATGAATGATGCATCTGCAACTGTAACT GCAATGCAGCCCAACGAGGGGATGGAGGAGTTCCCTGTCAAGGTTCGGAAGCCTTACACG ATCACCAAGCAGCGGGAGAAGTGGACGGAAGAAGAGCACGACAAGTTCCTTGAGGCATTG AAGCTGTATGGTCGCTCTTGGCGTCAGATACAAGAGCACATTGGCACAAAGACTGCTGTC CAAATTCGGAGCCATGCCCAGAAGTTTTTCTCAAAGGTGGTGCGTGAGCCCGGTTCCAAT AATGCGATTGAGATCCCTCCACCTAGGCCAAAGAGAAAACCACTTCATCCGTACCCTCGA AAGTGTGCGAATTCTGGATCGGACGCAAATCCAGCAACAGCGCAATTGAAGCTTGCTCCT GGCTCATCTTCATCTGGCTCTGATCAAGAGAATGGTTCTCCTATATCGGTGCTATCTGCG ATGCAGTCAGATGCTTTTGGATCGTCAGTATCCAATCCATCAACCAGATGTACCTCCCCA GCGTCATCTGACGATGGAAATAACATTCCCACATTCACGAGTGGGGAAGATAATAATGTG CCTTGTGAACCAACAGTGATAGATCCGTCCCAGTCCCACAAGGAAATAGACCAAGATAGA AAAGACGTGAATAATATGTCTGAAGAGGATTCTTCAGAAGAAGAGGTGCAAGAAACAAGC TTGAAGCTATTTGGGAGGACAGTTGTCATCCCAGATCCAAGGAAGAGAAGCTCCTCAGAT CCGAAGCATGAAAGTGAGGAGCAGATATCACAGCCTTCCAATGAAGAAATGTTGCAGGCT TCTTCATCGGTTGGGGAGATTCCAGCGGCATATTGTGCACCAAATGGTTGGTTTATGTCA TACAATTCTTTCCCATTCCAATTCGGTGAATCAGCGGCAGATGCTAGAATTCCCCCTTTA CACGTGTGGTGGCCTTACTACGGTTTTGCTCCCATTAGCCATCCTAGAGGACTAAGCACA GTGATGCAGCAGACTGAAGGTAGTGACGAGAGTGACGGTGTGAAGAGCCACTCATCCGAA TCAAGTTCGGACTCCGGGGAAAATGTGCAGATGACCGCTCCCCAGAGCTCGAGAATAGTG GAATCACTTGGAGCGATTTACGTCCGAGACTCAGGTTCAAGTTTTGAGCTAAAACCGAGC GCAAATTCAGCGTTTGTAAGAGTGAAGCCAAGCAACAGCGGAGATGAAGAGGTAATAAGG GGATTTGTGCCTTATAAAAGATGCAAATTTCAATAA

Peptide Sequence

PEP ID	Os06t0728700-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:31025972:31028984:-1 gene:Os06g0728700 transcript:Os06t0728700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os06t0728700-01)
Sequence	MASMPQLEEKDSSDLAINKGPSLDLVKSPLMMNDASATVTAMQPNEGMEEFPVKVRKPYT ITKQREKWTEEEHDKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPGSN NAIEIPPPRPKRKPLHPYPRKCANSGSDANPATAQLKLAPGSSSSGSDQENGSPISVLSA MQSDAFGSSVSNPSTRCTSPASSDDGNNIPTFTSGEDNNVPCEPTVIDPSQSHKEIDQDR KDVNNMSEEDSSEEEVQETSLKLFGRTVVIPDPRKRSSSDPKHESEEQISQPSNEEMLQA SSSVGEIPAAYCAPNGWFMSYNSFPFQFGESAADARIPPLHVWWPYYGFAPISHPRGLST VMQQTEGSDESDGVKSHSSESSSDSGENVQMTAPQSSRIVESLGAIYVRDSGSSFELKPS ANSAFVRVKPSNSGDEEVIRGFVPYKRCKFQ

Transcript Sequence

Transcript ID	Os06t0728700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:31025972:31028984:-1 gene:Os06g0728700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os06t0728700-01)
Sequence	AGTTTCCTCTTCCTCTCGCATCCTAGCGGCAGCGGCAGCGGCAGCCTCCTCCTCCTCCGC CGCCGCCGCTCCTCTTCCCTCTCCCAACTCCCGTACGGGCGTACGGCCGCCTCGTCGCCG GATTTTTTTTTTCGTTCCCCCGGCGAGCTTGCACTCTCTTTTCTTCGATTCTCTTTCGGC TTTGCTTCTTCGGTCGCTTTTTTTTTTGGCTGTTCCTGGTCGATCCCGGCGAAGGAGGTG GTCGGGAAGCAAGATTTGAACTACTCCTCCTCATGGCTTCCATGCCGCAGCTGGAGGAAA AGGATTCATCCGATTTGGCAATCAACAAAGGCCCGTCGCTGGATCTTGTCAAATCTCCCT TGATGATGAATGATGCATCTGCAACTGTAACTGCAATGCAGCCCAACGAGGGGATGGAGG AGTTCCCTGTCAAGGTTCGGAAGCCTTACACGATCACCAAGCAGCGGGAGAAGTGGACGG AAGAAGAGCACGACAAGTTCCTTGAGGCATTGAAGCTGTATGGTCGCTCTTGGCGTCAGA TACAAGAGCACATTGGCACAAAGACTGCTGTCCAAATTCGGAGCCATGCCCAGAAGTTTT TCTCAAAGGTGGTGCGTGAGCCCGGTTCCAATAATGCGATTGAGATCCCTCCACCTAGGC CAAAGAGAAAACCACTTCATCCGTACCCTCGAAAGTGTGCGAATTCTGGATCGGACGCAA ATCCAGCAACAGCGCAATTGAAGCTTGCTCCTGGCTCATCTTCATCTGGCTCTGATCAAG AGAATGGTTCTCCTATATCGGTGCTATCTGCGATGCAGTCAGATGCTTTTGGATCGTCAG TATCCAATCCATCAACCAGATGTACCTCCCCAGCGTCATCTGACGATGGAAATAACATTC CCACATTCACGAGTGGGGAAGATAATAATGTGCCTTGTGAACCAACAGTGATAGATCCGT CCCAGTCCCACAAGGAAATAGACCAAGATAGAAAAGACGTGAATAATATGTCTGAAGAGG ATTCTTCAGAAGAAGAGGTGCAAGAAACAAGCTTGAAGCTATTTGGGAGGACAGTTGTCA TCCCAGATCCAAGGAAGAGAAGCTCCTCAGATCCGAAGCATGAAAGTGAGGAGCAGATAT CACAGCCTTCCAATGAAGAAATGTTGCAGGCTTCTTCATCGGTTGGGGAGATTCCAGCGG CATATTGTGCACCAAATGGTTGGTTTATGTCATACAATTCTTTCCCATTCCAATTCGGTG AATCAGCGGCAGATGCTAGAATTCCCCCTTTACACGTGTGGTGGCCTTACTACGGTTTTG CTCCCATTAGCCATCCTAGAGGACTAAGCACAGTGATGCAGCAGACTGAAGGTAGTGACG AGAGTGACGGTGTGAAGAGCCACTCATCCGAATCAAGTTCGGACTCCGGGGAAAATGTGC AGATGACCGCTCCCCAGAGCTCGAGAATAGTGGAATCACTTGGAGCGATTTACGTCCGAG ACTCAGGTTCAAGTTTTGAGCTAAAACCGAGCGCAAATTCAGCGTTTGTAAGAGTGAAGC CAAGCAACAGCGGAGATGAAGAGGTAATAAGGGGATTTGTGCCTTATAAAAGATGCAAAT TTCAATAACGCAGGCAAGCGGGTATTTTCTTGAAAGCTGCTAATTTAACAGAGAAGAGTA GGAGCACGAACGTTGCTTGCATCACTGTATTTTTTTTTGTTTGTTTGCGGGGATTGGTGG TGCATTAATGAATTGTTTGCTGCTTGCACCTTAAAAAGGATAGAGATGGTGTAAGCAGTT TGTTGCTGTAAGAATGTTACATGTAGACTAGTACTTAAAATTATAGGGGATGCCAATCTC TGCCCTGATGATGTTGTAAAAGCAGTACGCACCATGTTTTACCTCTGGTTGAAAGCTAAG CTGTTAATGG