Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0725900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:30870346:30877988:-1 gene:Os06g0725900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FTSH1 description:Similar to Cell division protein ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9). (Os06t0725900-01);Similar to cDNA clone:J013001F19, full insert sequence. (Os06t0725900-02)
Sequence	ATGGCGCCGCCGTGCTCCATCTCCTCCGCCTCCCACCTCCTCATCACTGCCTCCCTCCCC AAGCCCTCCCTCCGCCCACCTCGCCTCCCCCACCCCAAGCCCCTCCCCGCCGCCCTCCTC GCCCTCGCCGCCGCCGCCCCCACGCTCCCCGCCCTCGCCGACGTGCCCGCGCCACCCCCC TCCCCGACCCAGGATGTCCAGGTACTAGAGGCCCCCTCCCCGGCCGCCAACCCTTTCTCC AACGCCCTCCTCACCGCGCCTAAGCCCACCTCCTCCGCCGCCGCCGACCTCCCCGAGGGC GCCCAGTGGCGCTACAGCGAGTTCCTCAGCGCCGTCAAGAAGGGCAAGGTCGAGCGCGTC AGGTTCTCCAAGGATGGTGGCCTACTCCAGCTCACCGCCATCGACGGCCGCCGCGCCACC GTCGTCGTCCCCAACGACCCCGATCTCATTGACATCCTCGCCACCAACGGCGTCGACATC TCCGTCGCCGAGGGCGACGCCGCCGGCCCCGGCGGATTCCTCGCCTTCGTCGGCAACCTC CTCTTCCCCTTCCTCGCTTTCGCTGGCCTCTTCTTCCTCTTCCGCCGCGCCCAGGGCGGC CCCGGCGCTGGACCTGGCGGCCTCGGCGGGCCCATGGACTTCGGCCGCTCCAAGAGCAAG TTCCAGGAGGTGCCCGAGACTGGCGTCACCTTCGTCGACGTCGCCGGCGCCGACCAGGCC AAGCTCGAGCTGCAGGAGGTCGTCGATTTCCTCAAGAACCCCGACAAGTACACCGCGCTC GGGGCCAAGATCCCCAAGGGATGCCTGCTCGTCGGCCCGCCCGGAACCGGGAAGACACTG CTGGCGCGTGCCGTCGCCGGGGAGGCCGGAGTGCCATTCTTCTCCTGCGCCGCGTCCGAG TTCGTTGAGCTGTTCGTCGGTGTCGGTGCCTCCAGGGTCAGGGACCTGTTCGAGAAGGCC AAGGCCAAGGCCCCTTGCATCGTCTTCATTGATGAAATTGATGCCGTCGGGAGGCAGCGT GGTGCTGGGCTCGGAGGGGGAAATGATGAGAGGGAGCAGACCATTAACCAGCTCTTGACT GAGATGGATGGATTTGCCGGCAATAGCGGTGTCATTGTGCTCGCCGCGACAAACAGGCCT GATGTGCTCGACGCGGCTCTTCTTCGCCCTGGGAGGTTCGATCGGCAGGTCACCGTAGAC AGGCCGGATGTCGCCGGGCGTGTCAAGATTCTTGAGGTTCACTCGAGAGGAAAGGCTCTG GCAAAAGATGTCGACTTTGAGAAAATTGCCCGGAGAACCCCTGGTTTCACTGGAGCTGAT CTTCAAAACTTGATGAATGAGGCTGCTATTCTTGCTGCTCGTCGTGATCTGAAGGAGATT AGCAAGGATGAGATCTCTGATGCTTTGGAGAGGATCATTGCTGGGCCTGAGAAGAAAAAT GCTGTTGTTTCAGAAGAGAAGAGGAGACTTGTGGCTTACCATGAGGCTGGTCATGCCCTT GTTGGTGCCCTCATGCCTGAATATGACCCTGTTGCTAAGATTTCCATCATTCCTCGTGGT CAAGCTGGTGGACTCACATTCTTTGCTCCAAGCGAGGAGAGGCTTGAGTCTGGATTGTAC AGCAGGAGCTACCTAGAGAACCAAATGGCCGTAGCTCTTGGTGGAAGGGTTGCCGAAGAG GTGATCTTTGGCCAAGAAAATGTGACAACTGGGGCCTCCAACGATTTTATGCAGGTTTCA CGTGTTGCAAGACAAATGGTTGAAAGATTTGGATTCAGCAAGAAGATCGGGCAAGTTGCG ATTGGTGGACCTGGTGGAAATCCTTTCTTGGGCCAGCAGATGTCGAGCCAGAAGGACTAC TCGATGGCCACCGCGGATGTTGTGGATGCTGAGGTGAGGGAGCTCGTGGAGAAGGCCTAC TCAAGAGCAACGCAGATCATCACGACACACATCGACATCCTCCACAAGCTTGCTCAGCTT CTGATGGAGAAGGAGACGGTGGACGGGGAAGAGTTCATGAGCCTGTTCATCGACGGTCAG GCAGAGTTGTTTGTCGCTTAA

Peptide Sequence

PEP ID	Os06t0725900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:30870346:30877988:-1 gene:Os06g0725900 transcript:Os06t0725900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FTSH1 description:Similar to Cell division protein ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9). (Os06t0725900-01);Similar to cDNA clone:J013001F19, full insert sequence. (Os06t0725900-02)
Sequence	MAPPCSISSASHLLITASLPKPSLRPPRLPHPKPLPAALLALAAAAPTLPALADVPAPPP SPTQDVQVLEAPSPAANPFSNALLTAPKPTSSAAADLPEGAQWRYSEFLSAVKKGKVERV RFSKDGGLLQLTAIDGRRATVVVPNDPDLIDILATNGVDISVAEGDAAGPGGFLAFVGNL LFPFLAFAGLFFLFRRAQGGPGAGPGGLGGPMDFGRSKSKFQEVPETGVTFVDVAGADQA KLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASE FVELFVGVGASRVRDLFEKAKAKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLT EMDGFAGNSGVIVLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRVKILEVHSRGKAL AKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKN AVVSEEKRRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLY SRSYLENQMAVALGGRVAEEVIFGQENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVA IGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVEKAYSRATQIITTHIDILHKLAQL LMEKETVDGEEFMSLFIDGQAELFVA

Transcript Sequence

Transcript ID	Os06t0725900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:30870346:30877988:-1 gene:Os06g0725900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FTSH1 description:Similar to Cell division protein ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9). (Os06t0725900-01);Similar to cDNA clone:J013001F19, full insert sequence. (Os06t0725900-02)
Sequence	TCTCCACCCCCACCTTCGCCCACCTCGCATCGACCATGGCGCCGCCGTGCTCCATCTCCT CCGCCTCCCACCTCCTCATCACTGCCTCCCTCCCCAAGCCCTCCCTCCGCCCACCTCGCC TCCCCCACCCCAAGCCCCTCCCCGCCGCCCTCCTCGCCCTCGCCGCCGCCGCCCCCACGC TCCCCGCCCTCGCCGACGTGCCCGCGCCACCCCCCTCCCCGACCCAGGATGTCCAGGTAC TAGAGGCCCCCTCCCCGGCCGCCAACCCTTTCTCCAACGCCCTCCTCACCGCGCCTAAGC CCACCTCCTCCGCCGCCGCCGACCTCCCCGAGGGCGCCCAGTGGCGCTACAGCGAGTTCC TCAGCGCCGTCAAGAAGGGCAAGGTCGAGCGCGTCAGGTTCTCCAAGGATGGTGGCCTAC TCCAGCTCACCGCCATCGACGGCCGCCGCGCCACCGTCGTCGTCCCCAACGACCCCGATC TCATTGACATCCTCGCCACCAACGGCGTCGACATCTCCGTCGCCGAGGGCGACGCCGCCG GCCCCGGCGGATTCCTCGCCTTCGTCGGCAACCTCCTCTTCCCCTTCCTCGCTTTCGCTG GCCTCTTCTTCCTCTTCCGCCGCGCCCAGGGCGGCCCCGGCGCTGGACCTGGCGGCCTCG GCGGGCCCATGGACTTCGGCCGCTCCAAGAGCAAGTTCCAGGAGGTGCCCGAGACTGGCG TCACCTTCGTCGACGTCGCCGGCGCCGACCAGGCCAAGCTCGAGCTGCAGGAGGTCGTCG ATTTCCTCAAGAACCCCGACAAGTACACCGCGCTCGGGGCCAAGATCCCCAAGGGATGCC TGCTCGTCGGCCCGCCCGGAACCGGGAAGACACTGCTGGCGCGTGCCGTCGCCGGGGAGG CCGGAGTGCCATTCTTCTCCTGCGCCGCGTCCGAGTTCGTTGAGCTGTTCGTCGGTGTCG GTGCCTCCAGGGTCAGGGACCTGTTCGAGAAGGCCAAGGCCAAGGCCCCTTGCATCGTCT TCATTGATGAAATTGATGCCGTCGGGAGGCAGCGTGGTGCTGGGCTCGGAGGGGGAAATG ATGAGAGGGAGCAGACCATTAACCAGCTCTTGACTGAGATGGATGGATTTGCCGGCAATA GCGGTGTCATTGTGCTCGCCGCGACAAACAGGCCTGATGTGCTCGACGCGGCTCTTCTTC GCCCTGGGAGGTTCGATCGGCAGGTCACCGTAGACAGGCCGGATGTCGCCGGGCGTGTCA AGATTCTTGAGGTTCACTCGAGAGGAAAGGCTCTGGCAAAAGATGTCGACTTTGAGAAAA TTGCCCGGAGAACCCCTGGTTTCACTGGAGCTGATCTTCAAAACTTGATGAATGAGGCTG CTATTCTTGCTGCTCGTCGTGATCTGAAGGAGATTAGCAAGGATGAGATCTCTGATGCTT TGGAGAGGATCATTGCTGGGCCTGAGAAGAAAAATGCTGTTGTTTCAGAAGAGAAGAGGA GACTTGTGGCTTACCATGAGGCTGGTCATGCCCTTGTTGGTGCCCTCATGCCTGAATATG ACCCTGTTGCTAAGATTTCCATCATTCCTCGTGGTCAAGCTGGTGGACTCACATTCTTTG CTCCAAGCGAGGAGAGGCTTGAGTCTGGATTGTACAGCAGGAGCTACCTAGAGAACCAAA TGGCCGTAGCTCTTGGTGGAAGGGTTGCCGAAGAGGTGATCTTTGGCCAAGAAAATGTGA CAACTGGGGCCTCCAACGATTTTATGCAGGTTTCACGTGTTGCAAGACAAATGGTTGAAA GATTTGGATTCAGCAAGAAGATCGGGCAAGTTGCGATTGGTGGACCTGGTGGAAATCCTT TCTTGGGCCAGCAGATGTCGAGCCAGAAGGACTACTCGATGGCCACCGCGGATGTTGTGG ATGCTGAGGTGAGGGAGCTCGTGGAGAAGGCCTACTCAAGAGCAACGCAGATCATCACGA CACACATCGACATCCTCCACAAGCTTGCTCAGCTTCTGATGGAGAAGGAGACGGTGGACG GGGAAGAGTTCATGAGCCTGTTCATCGACGGTCAGGCAGAGTTGTTTGTCGCTTAATTGC GTTGTATGTTCATCCCCTTGGGTGAAATGGAGAAGGCGAATTTGTAGGAAGCACATCAAT TTAGGCGAGATGTTTTTGCATATACTTGTATAGTTCATTGTAAAGAATGGCAAATACTGA CATTGATCAAGTAAACAGTTGGTGCTTACGATTATAGCACCGCTAACTAAACATGATTCC ACTGTGCTCGCTGTACATCTGCACTGAAGACATGTCGCAGTTGCAGGCTTGCAGCTATTT CATCCGTGTGGACTTTAATATGTTTGAATCCAGAT