Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0717100-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:30465020:30468087:-1 gene:Os06g0717100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-associated family protein. (Os06t0717100-01)
Sequence	ATGGCTTCCTACTGCTACTACGGCAACACCTCCAACCCTAACCCTAACCCTAACCCTAGC CCTGCTCCCTCCGCTCCGCCGCTCTACCCCACGCTCAGCATGGCCGATCTCGCGCCCGTC CAGATAGGCCCCTCCTCCCCCTCGTCGCCGATGTCCCCGGCGTCTCCGGCCACCCCCGTC GACGCCTACGCCAATGCCCCGCCACCGTCGGAGGACGTCCTGCTCCGGATCCCGGGGGCG CAGCTCCACCTCATCGACCGCCACCGCAGCTACCCGCTCGCCGCCGGCGACCTCTCGCTG CTCCGCATCCGCTCCGGCGACACCTCCCTCGCCGCCATCGCGCTCCTCCACCCCATCCAG TGGCCGCTCGCGCGCGACGTCGCCTCGGTGAAGCTCGACCCCTGCCACTATTCCTTCTCC CTCACCGTGCCGCCCTCCGCCGACGACCCCAACCCCGGCCCTCTCCATTACGGCCTCACG CTCTCCCACCCCGACCCGCGCCTCGATGGCATCCTCGCCACGTACACCAGCTTCTCCGTC CAGTCCGTGGTCGGCGGCGAGGCGTTGGCGAGCAAGGTTCGCGACGAGGTGGAGGCGGCG GCGTACTGGACGGCGGTGGCGCCCAATGTGGAGGAGTACGGCGGGAAGGTGGCAAATGCG ATCGCGACGGGGGCCGGGCACCTGGCCAAGGGGATTCTGTGGTGCAGTGAACTGACGGTG GACAGGCTCCGGTGGGGAAACGAGGTCCTCAAGAGGAGGATGCAGCCCGGCGACGCCGAC GCCGAGGTCAGCCCCGAGATGTTGAGGCGGATCAAAAGGGTCAAGATGGTGACAAAAATG TCTGAGAAAGTGGCAACTGGAATACTATCCGGAGTTGTAAAGGTTACTGGCTATTTTACA AACTCAATAGCTAACTCAAAAGCTGGCAAGAAGTTCTTTAATTTGTTACCTGGAGAGATT GTTCTTGCTTCGCTTGATGGATTCGGGAAGATTTGCGACGCAGTCGAAGTGGCTGGAACG AATGTTCTGTCCACATCATCAACTGTGACTACCGGTCTTGTATCCCACAAATATGGGGAG AAAGCCGCGGCTGCGACCAATGAAGGGATGGATGCAGCAGGCCACGCAATCGGGACAGCA TGGGCAGTGTTCAAGATTCGGCAGGCCTTGAACCCGAAGAGCGTCCTAAAGCCAACCTCA CTCGCCAAGTCTACCATCAAAGCAGCAGCTGCTGACTATCGTGCAAAGCAAAAGAAATAG

Peptide Sequence

PEP ID	Os06t0717100-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:30465020:30468087:-1 gene:Os06g0717100 transcript:Os06t0717100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-associated family protein. (Os06t0717100-01)
Sequence	MASYCYYGNTSNPNPNPNPSPAPSAPPLYPTLSMADLAPVQIGPSSPSSPMSPASPATPV DAYANAPPPSEDVLLRIPGAQLHLIDRHRSYPLAAGDLSLLRIRSGDTSLAAIALLHPIQ WPLARDVASVKLDPCHYSFSLTVPPSADDPNPGPLHYGLTLSHPDPRLDGILATYTSFSV QSVVGGEALASKVRDEVEAAAYWTAVAPNVEEYGGKVANAIATGAGHLAKGILWCSELTV DRLRWGNEVLKRRMQPGDADAEVSPEMLRRIKRVKMVTKMSEKVATGILSGVVKVTGYFT NSIANSKAGKKFFNLLPGEIVLASLDGFGKICDAVEVAGTNVLSTSSTVTTGLVSHKYGE KAAAATNEGMDAAGHAIGTAWAVFKIRQALNPKSVLKPTSLAKSTIKAAAADYRAKQKK

Transcript Sequence

Transcript ID	Os06t0717100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:30465020:30468087:-1 gene:Os06g0717100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-associated family protein. (Os06t0717100-01)
Sequence	CCCAAACCGCGTGGGTCCCACCGGGCTCCGTCGCCACGTACGCGGCCGGCTCTCCCTATA CAAGCGCCACGTCGCCGGCGAGCCGCCGCCCCTCCACCGTCCCCGGCGGCGTATATTCCC CCCCGTGGCGCGCTCCCATGGCTTCCTACTGCTACTACGGCAACACCTCCAACCCTAACC CTAACCCTAACCCTAGCCCTGCTCCCTCCGCTCCGCCGCTCTACCCCACGCTCAGCATGG CCGATCTCGCGCCCGTCCAGATAGGCCCCTCCTCCCCCTCGTCGCCGATGTCCCCGGCGT CTCCGGCCACCCCCGTCGACGCCTACGCCAATGCCCCGCCACCGTCGGAGGACGTCCTGC TCCGGATCCCGGGGGCGCAGCTCCACCTCATCGACCGCCACCGCAGCTACCCGCTCGCCG CCGGCGACCTCTCGCTGCTCCGCATCCGCTCCGGCGACACCTCCCTCGCCGCCATCGCGC TCCTCCACCCCATCCAGTGGCCGCTCGCGCGCGACGTCGCCTCGGTGAAGCTCGACCCCT GCCACTATTCCTTCTCCCTCACCGTGCCGCCCTCCGCCGACGACCCCAACCCCGGCCCTC TCCATTACGGCCTCACGCTCTCCCACCCCGACCCGCGCCTCGATGGCATCCTCGCCACGT ACACCAGCTTCTCCGTCCAGTCCGTGGTCGGCGGCGAGGCGTTGGCGAGCAAGGTTCGCG ACGAGGTGGAGGCGGCGGCGTACTGGACGGCGGTGGCGCCCAATGTGGAGGAGTACGGCG GGAAGGTGGCAAATGCGATCGCGACGGGGGCCGGGCACCTGGCCAAGGGGATTCTGTGGT GCAGTGAACTGACGGTGGACAGGCTCCGGTGGGGAAACGAGGTCCTCAAGAGGAGGATGC AGCCCGGCGACGCCGACGCCGAGGTCAGCCCCGAGATGTTGAGGCGGATCAAAAGGGTCA AGATGGTGACAAAAATGTCTGAGAAAGTGGCAACTGGAATACTATCCGGAGTTGTAAAGG TTACTGGCTATTTTACAAACTCAATAGCTAACTCAAAAGCTGGCAAGAAGTTCTTTAATT TGTTACCTGGAGAGATTGTTCTTGCTTCGCTTGATGGATTCGGGAAGATTTGCGACGCAG TCGAAGTGGCTGGAACGAATGTTCTGTCCACATCATCAACTGTGACTACCGGTCTTGTAT CCCACAAATATGGGGAGAAAGCCGCGGCTGCGACCAATGAAGGGATGGATGCAGCAGGCC ACGCAATCGGGACAGCATGGGCAGTGTTCAAGATTCGGCAGGCCTTGAACCCGAAGAGCG TCCTAAAGCCAACCTCACTCGCCAAGTCTACCATCAAAGCAGCAGCTGCTGACTATCGTG CAAAGCAAAAGAAATAGTTCGTCCTCAACGATCAACCCAGTGTTGGAACGTTCCTGACTA ATAGAAGCTCTGCCCCAATCCATCCCAGCTAGTTTTTGCAGATGTCTTCTCTTGTTTTCT TTTTTTCACGAGTCATGGGTGTGCTGCACTACTGCTACTGTTGCTTGTAATATATGTGCT GAAAAACCAAAAGCAACTCCTGAACGCTGATGATGTACTACCACTTTTGTGCTGAATGAT GCAATGTACGGAAATCTGTGGTGTT