Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0716700-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:30444504:30450435:-1 gene:Os06g0716700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE 90KDA HEAT SHOCK PROTEIN description:Similar to Heat shock protein 90. (Os06t0716700-01);Similar to Heat shock protein 90. (Os06t0716700-02);Similar to Heat shock protein 90. (Os06t0716700-03)
Sequence	ATGCGCAAGTGGGCGCTCTCCTCCGCGCTCCTCCTCCTCCTCCTCCTCCTCACCACACTC CCCGATCCAGCTAAGAAGCTCCAAGTCAATGCTGATGACAGCACTGATGAGTTAGTTGAT CCGCCGAAGGTAGAGGAGAAGATTGGTGGTGTTCCCCATGGCCTGTCCACGGACTCTGAG GTTGTTCAGAGGGAGGCTGAGTCAATCTCGAGGAAGACCCTCAGGAGCTCAGCGGAGAAA TTTGAGTTCCAGGCTGAGGTGTCCAGACTCATGGACATCATCATCAACTCACTCTACAGC AACAAGGACATTTTCCTGAGGGAGCTCATCTCCAATGCTTCTGATGCTTTGGACAAGATT AGGTTCCTGGCTCTCACTGATAAGGAGGTTTTGGGCGAAGGTGACACTGCTAAGCTTGAA ATCCAGATTAAGCTGGATAAGGAGAAGAAGATTCTCTCCATTCGGGATAGGGGTATTGGT ATGACCAAGGAAGATCTCATTAAGAACCTTGGGACCATTGCCAAATCTGGAACTTCAGCT TTTGTGGAAAAGATGCAGACTGGGGGTGACCTCAATCTCATTGGGCAATTCGGTGTTGGT TTCTATTCAGTATACTTGGTTGCTGACTATGTTGAAGTGATCAGCAAGCACAATGACGAC AAACAGCATGTCTGGGAGTCCAAAGCTGATGGATCATTCGCTATCTCTGAGGATACATGG AATGAACCCCTGGGCCGTGGAACTGAAATAAGACTGCACCTCCGAGATGAAGCCAAGGAG TACGTGGAAGAAGACAAGCTAAAGGATTTGGTGAAGAAGTACTCTGAGTTCATCAATTTC CCCATTTACTTGTGGGCAACCAAGGAGGTTGATGTGGAAGTGCCAGCTGATGAGGATGAG TCAAGTGAATCAAGTGAAGAAGAGGAATCATCCCCTGAGTCTACAGAGGAAGAAGAGACA GAAGAGAGTGAAGAGAAGAAGCCCAAGACAAAGACAGTAAAGGAAACCACTACTGAGTGG GAGCTTCTGAATGATGTGAAGGCTATATGGCTTCGTAGCCCTAAGGAGGTTACTGAAGAA GAATACACAAAGTTTTACCACTCACTTGCTAAGGACTTTGGTGATGACAAGCCCTTGTCT TGGAGCCACTTCACTGCTGAGGGAGATGTTGAGTTCAAAGCTTTGCTCTTTGTTCCTCCC AAGGCTCCACATGATCTCTATGAGAGTTACTACAACTCTAACAAGTCAAACCTTAAGTTG TATGTTAGAAGGGTTTTCATCTCTGATGAATTTGATGAGCTTCTTCCGAAGTATCTCAGC TTTTTGAAGGGTCTCGTCGACTCGGACACATTGCCTCTCAATGTATCACGAGAAATGCTC CAACAACATAGCAGCCTGAAGACCATCAAGAAGAAACTAATCCGCAAAGCTCTTGACATG ATTAGAAAACTTGCTGAGGAAGATCCTGATGAGTACAGCAACAAAGATAAGACAGATGAA GAAAAAAGTGCAATGGAGGAGAAAAAGGGCCAGTATGCCAAGTTCTGGAATGAGTTTGGA AAATCAGTCAAGTTGGGCATCATTGAAGACGCAACTAACAGGAACCGTCTTGCAAAGCTT CTGAGATTTGAAAGTACCAAGTCGGAAGGCAAACTTGCCTCTCTTGATGAGTACATTTCA AGGATGAAGCCAGGGCAGAAGGACATCTTTTACATTACCGGAAGCAGCAAGGAACAATTA GAGAAATCACCGTTCCTTGAGAGGCTAACCAAAAAGAACTACGAGGTTATCTACTTCACT GACCCTGTTGACGAGTACTTGATGCAATACCTCATGGACTACGAGGACAAGAAGTTCCAG AACGTCTCCAAGGAGGGTCTCAAACTCGGCAAGGACTCTAAGCTCAAGGACCTCAAGGAG TCCTTCAAGGAGCTGACCGACTGGTGGAAGAAGGCTCTTGACACCGAGAGCGTGGACTCG GTGAAGATCAGCAACCGGCTGAGCGACACCCCCTGCGTGGTGGTGACATCCAAGTACGGG TGGAGCGCCAACATGGAGAAGATCATGCAGTCACAGACCCTCTCGGATGCCAGCAAGCAG GCGTACATGCGCGGCAAGAGGGTACTCGAGATCAACCCCAGGCACCCCATCATCAAGGAA CTCCGTGACAAGGTCGCCCAGGACAGCGAGAGCGAGAGCTTGAAGCAGACGGCGAAGCTG GTGTACCAGACGGCCCTCATGGAGAGCGGCTTCAACCTTCCTGATCCCAAGGACTTCGCC TCCAGCATCTACAGGTCGGTGCAGAAGAGCCTTGACCTGAGCCCCGACGCGGCCGTGGAA GAGGAAGAGGAGGTCGAGGAGGCCGAGGTTGAAGAGAAGGAATCATCCAACATCAAGGAG GAGGCGGAGCCGTCGTCGTATGATAAGGACGAGCTGTAG

Peptide Sequence

PEP ID	Os06t0716700-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:30444504:30450435:-1 gene:Os06g0716700 transcript:Os06t0716700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE 90KDA HEAT SHOCK PROTEIN description:Similar to Heat shock protein 90. (Os06t0716700-01);Similar to Heat shock protein 90. (Os06t0716700-02);Similar to Heat shock protein 90. (Os06t0716700-03)
Sequence	MRKWALSSALLLLLLLLTTLPDPAKKLQVNADDSTDELVDPPKVEEKIGGVPHGLSTDSE VVQREAESISRKTLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKI RFLALTDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSA FVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQHVWESKADGSFAISEDTW NEPLGRGTEIRLHLRDEAKEYVEEDKLKDLVKKYSEFINFPIYLWATKEVDVEVPADEDE SSESSEEEESSPESTEEEETEESEEKKPKTKTVKETTTEWELLNDVKAIWLRSPKEVTEE EYTKFYHSLAKDFGDDKPLSWSHFTAEGDVEFKALLFVPPKAPHDLYESYYNSNKSNLKL YVRRVFISDEFDELLPKYLSFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDM IRKLAEEDPDEYSNKDKTDEEKSAMEEKKGQYAKFWNEFGKSVKLGIIEDATNRNRLAKL LRFESTKSEGKLASLDEYISRMKPGQKDIFYITGSSKEQLEKSPFLERLTKKNYEVIYFT DPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKLKDLKESFKELTDWWKKALDTESVDS VKISNRLSDTPCVVVTSKYGWSANMEKIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKE LRDKVAQDSESESLKQTAKLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVE EEEEVEEAEVEEKESSNIKEEAEPSSYDKDEL

Transcript Sequence

Transcript ID	Os06t0716700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:30444504:30450435:-1 gene:Os06g0716700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE 90KDA HEAT SHOCK PROTEIN description:Similar to Heat shock protein 90. (Os06t0716700-01);Similar to Heat shock protein 90. (Os06t0716700-02);Similar to Heat shock protein 90. (Os06t0716700-03)
Sequence	GTCGAGCCGCGGCGAGGCGACGAACTCATCACCTCCACTCTCTGCTGCAACACGAGTGAA TCGGAGGCGGCACGATGCGCAAGTGGGCGCTCTCCTCCGCGCTCCTCCTCCTCCTCCTCC TCCTCACCACACTCCCCGATCCAGCTAAGAAGCTCCAAGTCAATGCTGATGACAGCACTG ATGAGTTAGTTGATCCGCCGAAGGTAGAGGAGAAGATTGGTGGTGTTCCCCATGGCCTGT CCACGGACTCTGAGGTTGTTCAGAGGGAGGCTGAGTCAATCTCGAGGAAGACCCTCAGGA GCTCAGCGGAGAAATTTGAGTTCCAGGCTGAGGTGTCCAGACTCATGGACATCATCATCA ACTCACTCTACAGCAACAAGGACATTTTCCTGAGGGAGCTCATCTCCAATGCTTCTGATG CTTTGGACAAGATTAGGTTCCTGGCTCTCACTGATAAGGAGGTTTTGGGCGAAGGTGACA CTGCTAAGCTTGAAATCCAGATTAAGCTGGATAAGGAGAAGAAGATTCTCTCCATTCGGG ATAGGGGTATTGGTATGACCAAGGAAGATCTCATTAAGAACCTTGGGACCATTGCCAAAT CTGGAACTTCAGCTTTTGTGGAAAAGATGCAGACTGGGGGTGACCTCAATCTCATTGGGC AATTCGGTGTTGGTTTCTATTCAGTATACTTGGTTGCTGACTATGTTGAAGTGATCAGCA AGCACAATGACGACAAACAGCATGTCTGGGAGTCCAAAGCTGATGGATCATTCGCTATCT CTGAGGATACATGGAATGAACCCCTGGGCCGTGGAACTGAAATAAGACTGCACCTCCGAG ATGAAGCCAAGGAGTACGTGGAAGAAGACAAGCTAAAGGATTTGGTGAAGAAGTACTCTG AGTTCATCAATTTCCCCATTTACTTGTGGGCAACCAAGGAGGTTGATGTGGAAGTGCCAG CTGATGAGGATGAGTCAAGTGAATCAAGTGAAGAAGAGGAATCATCCCCTGAGTCTACAG AGGAAGAAGAGACAGAAGAGAGTGAAGAGAAGAAGCCCAAGACAAAGACAGTAAAGGAAA CCACTACTGAGTGGGAGCTTCTGAATGATGTGAAGGCTATATGGCTTCGTAGCCCTAAGG AGGTTACTGAAGAAGAATACACAAAGTTTTACCACTCACTTGCTAAGGACTTTGGTGATG ACAAGCCCTTGTCTTGGAGCCACTTCACTGCTGAGGGAGATGTTGAGTTCAAAGCTTTGC TCTTTGTTCCTCCCAAGGCTCCACATGATCTCTATGAGAGTTACTACAACTCTAACAAGT CAAACCTTAAGTTGTATGTTAGAAGGGTTTTCATCTCTGATGAATTTGATGAGCTTCTTC CGAAGTATCTCAGCTTTTTGAAGGGTCTCGTCGACTCGGACACATTGCCTCTCAATGTAT CACGAGAAATGCTCCAACAACATAGCAGCCTGAAGACCATCAAGAAGAAACTAATCCGCA AAGCTCTTGACATGATTAGAAAACTTGCTGAGGAAGATCCTGATGAGTACAGCAACAAAG ATAAGACAGATGAAGAAAAAAGTGCAATGGAGGAGAAAAAGGGCCAGTATGCCAAGTTCT GGAATGAGTTTGGAAAATCAGTCAAGTTGGGCATCATTGAAGACGCAACTAACAGGAACC GTCTTGCAAAGCTTCTGAGATTTGAAAGTACCAAGTCGGAAGGCAAACTTGCCTCTCTTG ATGAGTACATTTCAAGGATGAAGCCAGGGCAGAAGGACATCTTTTACATTACCGGAAGCA GCAAGGAACAATTAGAGAAATCACCGTTCCTTGAGAGGCTAACCAAAAAGAACTACGAGG TTATCTACTTCACTGACCCTGTTGACGAGTACTTGATGCAATACCTCATGGACTACGAGG ACAAGAAGTTCCAGAACGTCTCCAAGGAGGGTCTCAAACTCGGCAAGGACTCTAAGCTCA AGGACCTCAAGGAGTCCTTCAAGGAGCTGACCGACTGGTGGAAGAAGGCTCTTGACACCG AGAGCGTGGACTCGGTGAAGATCAGCAACCGGCTGAGCGACACCCCCTGCGTGGTGGTGA CATCCAAGTACGGGTGGAGCGCCAACATGGAGAAGATCATGCAGTCACAGACCCTCTCGG ATGCCAGCAAGCAGGCGTACATGCGCGGCAAGAGGGTACTCGAGATCAACCCCAGGCACC CCATCATCAAGGAACTCCGTGACAAGGTCGCCCAGGACAGCGAGAGCGAGAGCTTGAAGC AGACGGCGAAGCTGGTGTACCAGACGGCCCTCATGGAGAGCGGCTTCAACCTTCCTGATC CCAAGGACTTCGCCTCCAGCATCTACAGGTCGGTGCAGAAGAGCCTTGACCTGAGCCCCG ACGCGGCCGTGGAAGAGGAAGAGGAGGTCGAGGAGGCCGAGGTTGAAGAGAAGGAATCAT CCAACATCAAGGAGGAGGCGGAGCCGTCGTCGTATGATAAGGACGAGCTGTAGTGATGTG TCGCCACCAACTGTTGTTTTTTTATCTAGCTCTTGTGTTAGGTTGTTTAAAAATGTGATG GTTTCGAGGGACGTCCATTTTTCCATGCGAAAATGCATAGTACCATGATACGGGGATTTT GTCGATGTACGTAGTTTGTGATACTCTAGTTCAAATTAATGGCCGTCTAATTTCGATCAT CC