Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0716000-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:30412482:30414511:1 gene:Os06g0716000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF668 family protein. (Os06t0716000-01);Hypothetical conserved gene. (Os06t0716000-02)
Sequence

GTTTCTGTAGGTGCTGACCTTTTCAATTCAGAGCAAGCTCAAAACAAAAGACTAGGTTCC
TGCGGTCTAGCCTTACATTATGCGAACATAATCAATCAAATTGAAAATATTGTTTCTAGA
CCACTCTCTCTTCCTCCTAGTGCTAGGGACAATCTGTATCATGGTCTGCCAGTAACAGTG
AAGTCAGCTCTCAGATCGCGATTGCAATCAGTTAATGCCCAAGAAGAGCGTACTGTAGCT
CAAATTAAAGCTGAAATGCAGAAAACTCTTCGCTGGATTCTACCGATTGCTGAAAATACA
ATAAGAGCACATCAAGGTTTTGGATGGGTCGGCGAATGGGCAAACCTTGGTTGCGAAATG
AACAAGAAATCAGGCTCCCAGCTCAGTATCACCCGTGTCCAGACTCTTCATTACGCCGAT
AAGGCAAAGACGGAGCAATACATGCTCGATCTGGTGGTGCTGCTCCACCATTTAGTTGTC
CAGGTGAAGAACAGAGGCTATGGGAGCAAGTCCTCAAAGCACGACCAGTCCCGATCCCGC
AAGGGAATGGATCTTCAACCTGAATCCAAGCTCAACACATCTCCAGTGAACAACGCCACA
TATCCGAGCCCGTTGTCGGAGTCCGAACGCGAGACGCTGGACCACCTGAGCTTCAAGAGG
ACGGGCTACGGTAGGAGCAAGAGCTGCGAGCCTCCACCCAATAGAGGGAAGAAGGCACAT
CGAACCTGGGATTCATGCCGGAGCCATGGCAGCTCGCCGGCGAGGGAATTCGGTAGGAAC
TCAGCTTCAGAGCTTGACAAGACGATGGACCTGGATGTAATAGATGGGTTAGATAGACTG
ACTTCTTACCACCCAACATCCCCCACATTTTGTTAG

Peptide Sequence

PEP ID

Os06t0716000-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:30412482:30414511:1 gene:Os06g0716000 transcript:Os06t0716000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF668 family protein. (Os06t0716000-01);Hypothetical conserved gene. (Os06t0716000-02)
Sequence

VSVGADLFNSEQAQNKRLGSCGLALHYANIINQIENIVSRPLSLPPSARDNLYHGLPVTV
KSALRSRLQSVNAQEERTVAQIKAEMQKTLRWILPIAENTIRAHQGFGWVGEWANLGCEM
NKKSGSQLSITRVQTLHYADKAKTEQYMLDLVVLLHHLVVQVKNRGYGSKSSKHDQSRSR
KGMDLQPESKLNTSPVNNATYPSPLSESERETLDHLSFKRTGYGRSKSCEPPPNRGKKAH
RTWDSCRSHGSSPAREFGRNSASELDKTMDLDVIDGLDRLTSYHPTSPTFC

Transcript Sequence

Transcript ID

Os06t0716000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:30412482:30414511:1 gene:Os06g0716000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF668 family protein. (Os06t0716000-01);Hypothetical conserved gene. (Os06t0716000-02)
Sequence

GTTTCTGTAGGTGCTGACCTTTTCAATTCAGAGCAAGCTCAAAACAAAAGACTAGGTTCC
TGCGGTCTAGCCTTACATTATGCGAACATAATCAATCAAATTGAAAATATTGTTTCTAGA
CCACTCTCTCTTCCTCCTAGTGCTAGGGACAATCTGTATCATGGTCTGCCAGTAACAGTG
AAGTCAGCTCTCAGATCGCGATTGCAATCAGTTAATGCCCAAGAAGAGCGTACTGTAGCT
CAAATTAAAGCTGAAATGCAGAAAACTCTTCGCTGGATTCTACCGATTGCTGAAAATACA
ATAAGAGCACATCAAGGTTTTGGATGGGTCGGCGAATGGGCAAACCTTGGTTGCGAAATG
AACAAGAAATCAGGCTCCCAGCTCAGTATCACCCGTGTCCAGACTCTTCATTACGCCGAT
AAGGCAAAGACGGAGCAATACATGCTCGATCTGGTGGTGCTGCTCCACCATTTAGTTGTC
CAGGTGAAGAACAGAGGCTATGGGAGCAAGTCCTCAAAGCACGACCAGTCCCGATCCCGC
AAGGGAATGGATCTTCAACCTGAATCCAAGCTCAACACATCTCCAGTGAACAACGCCACA
TATCCGAGCCCGTTGTCGGAGTCCGAACGCGAGACGCTGGACCACCTGAGCTTCAAGAGG
ACGGGCTACGGTAGGAGCAAGAGCTGCGAGCCTCCACCCAATAGAGGGAAGAAGGCACAT
CGAACCTGGGATTCATGCCGGAGCCATGGCAGCTCGCCGGCGAGGGAATTCGGTAGGAAC
TCAGCTTCAGAGCTTGACAAGACGATGGACCTGGATGTAATAGATGGGTTAGATAGACTG
ACTTCTTACCACCCAACATCCCCCACATTTTGTTAGGTATATGCTGCACAAAAATAGGTA
TTCTTTTGGTGTTCCTACGGTTGATTGATCGTATATATATCTTGTAAATGTGTGTGATCT
ACCTATATATTCTCTTACATGTACATATATACATAGCTTAGTAGTACAGCCCTGAGTTTG
AGTGGAAATATAGCAAGATCACAAGTGATGCTCT