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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0714100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:30279463:30281741:-1 gene:Os06g0714100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os06t0714100-01)
Sequence

ATGGCGACGTCGGCGGGGTTCCTGGCGCGGCGGGCGGCGCAGAAGGAGAGGGTGCGGCTG
CTCTACCGCCGCGCCCTCAAGGACACCCTCAACTGGGCCGTCCACCGCCACCTCTTCTAC
CAGGACGCGTCGGATCTCAGGGAGAAGTTCGAGGCGAACAGAGATGTGGACAACCCGGAT
GTGATCGATAGGCTTATCGATGATGCGGAAGCGCAGTACAGGAATTTCCAGCATCCCGAT
CCCTACATTGTCCCATGGGCTCCTGGTGGCAGTAAATTCACAAGAAACCCTCCTCCACCT
AAAGGGATCGAGATTATCTACAACTATGGAAAAGAAGACTGA

Peptide Sequence

PEP ID

Os06t0714100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:30279463:30281741:-1 gene:Os06g0714100 transcript:Os06t0714100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os06t0714100-01)
Sequence

MATSAGFLARRAAQKERVRLLYRRALKDTLNWAVHRHLFYQDASDLREKFEANRDVDNPD
VIDRLIDDAEAQYRNFQHPDPYIVPWAPGGSKFTRNPPPPKGIEIIYNYGKED

Transcript Sequence

Transcript ID

Os06t0714100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:30279463:30281741:-1 gene:Os06g0714100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os06t0714100-01)
Sequence

ATCCGAATCCCACCACACCATCGGAGAGGAGAGAGAAGAGGAAGCAAGCGGCGGCGGCGG
CGGCGGCGATGGCGACGTCGGCGGGGTTCCTGGCGCGGCGGGCGGCGCAGAAGGAGAGGG
TGCGGCTGCTCTACCGCCGCGCCCTCAAGGACACCCTCAACTGGGCCGTCCACCGCCACC
TCTTCTACCAGGACGCGTCGGATCTCAGGGAGAAGTTCGAGGCGAACAGAGATGTGGACA
ACCCGGATGTGATCGATAGGCTTATCGATGATGCGGAAGCGCAGTACAGGAATTTCCAGC
ATCCCGATCCCTACATTGTCCCATGGGCTCCTGGTGGCAGTAAATTCACAAGAAACCCTC
CTCCACCTAAAGGGATCGAGATTATCTACAACTATGGAAAAGAAGACTGATGAACAGGAG
CCCTGCTGCATCTAGGAGCAGAACTTAGCACCTCCAGGGTGCAAACAACTTAATTTCCCT
TTTTCCAGTTGATAACGTGCAATCGACATGTTGTATGATCAATAAGAACGAAGCCACTGG
TCTGTCACCCTTTTGTTTCGTTTTTCCATCAGCTAGTGCATTGTTGTTACATACACATCG
CTATGCCTATGCATCATTTATCTTTCAGTCAAGCATAAACTGCTTAATGTGTTACGTTCG
ATTGATCCATCC