Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0713800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:30262971:30266841:1 gene:Os06g0713800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 2A description:Alpha-amylase isozyme 2A precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os06t0713800-01)
Sequence	ATGGCGACCGGACGACGCCTCTCCATGATCCTCCTCCTCCTCCTTCTCGGCTTGGCTTCC GGCGACAAGATTCTCTTCCAGGGGTTCAACTGGGAGTCGTGGAGGCAGAGCGGAGGGTGG TACAACCTGCTGATGGGGAAGGTCGACGACATCGTCGCCGCCGGCGTCACGCACGTCTGG CTGCCGCCGCCGTCGCACTCCGTCTCCACGCAAGGGTACATGCCTGGGCGGCTGTACGAC TTGGATGCGTCTAGGTACGGCACGTCGATGGAGTTGAAGTCGTTGATCAGCGCGCTCCAC GGCAAGGGCATTCAGGCGATCGCTGACGTGGTGATCAACCACCGCTGCGCCGACTACAAG GACAGCCGCGGCATCTACTGCATCTTTGAGGGCGGCACACCTGACGGCCGCCTCGACTGG GGCCCCCACATGATCTGCCGCGATGATACCCAGTTCTCCGACGGCACAGGCAACCTCGAC ACCGGCGCCGACTTCGCCGCTGCCCCCGACATTGACCACCTCAATGGTGTCGTCCAGCGG GAGCTCACCGACTGGCTCCTCTGGCTCAAGTCTGACGAGGTTGGCTTCGATGCGTGGCGG CTCGACTTCGCAAGGGGGTACTCGCCGGAGGTGGCCAAGGTGTACATTGAGGGGACAACG CCGGTGGGGTTGGCGGTGGCGGAGCTGTGGGACTCGATGGCGTACGGCGGAGACGGGAAG CCGGAGTACAATCAGGACGCACACCGGCAGGCGTTGGTGGACTGGGTGGACAGGGTGGGT GGGACGGCGTCGGCGGGGATGGTGTTCGACTTCACGACGAAGGGGATCATGAACACGGCG GTGGAGGGGGAGCTGTGGCGGCTGATCGACCAGCAGGGGAAGGCACCGGGGGTGATCGGG TGGTGGCCGGCAAAGGCTGTCACCTTCGTCGACAACCACGACACTGGCTCGACGCAACAG ATGTGGCCATTCCCCTCCGACAAGGTCATGCAGGGCTACGCCTACATCCTCACCCATCCC GGCAACCCATGCATCTTCTACGACCATTTCTTCGATTGGGGGTTAAAGGAGCAGATCGCG GCGCTGGTGGCGGTGAGGCAGCGGAACGGCGTGACGGCGACGAGCTCGCTCAAGATCATG CTGCACGACGCCGACGCCTACGTCGCCGAGATCGACGGCAAGGTGGTGATGAAGATCGGC TCCCGCTACGACGTCTCCAGCCTCATCCCGCCCGGCTTCCACCTCGCCGCCCACGGCAAC GGCTACGCCGTCTGGGAGAAAATCGCCGCCGCCGCCGCCGCCGCCGATCATCGCACCTCT TCCAGCGCATCGCTCTGA

Peptide Sequence

PEP ID	Os06t0713800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:30262971:30266841:1 gene:Os06g0713800 transcript:Os06t0713800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 2A description:Alpha-amylase isozyme 2A precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os06t0713800-01)
Sequence	MATGRRLSMILLLLLLGLASGDKILFQGFNWESWRQSGGWYNLLMGKVDDIVAAGVTHVW LPPPSHSVSTQGYMPGRLYDLDASRYGTSMELKSLISALHGKGIQAIADVVINHRCADYK DSRGIYCIFEGGTPDGRLDWGPHMICRDDTQFSDGTGNLDTGADFAAAPDIDHLNGVVQR ELTDWLLWLKSDEVGFDAWRLDFARGYSPEVAKVYIEGTTPVGLAVAELWDSMAYGGDGK PEYNQDAHRQALVDWVDRVGGTASAGMVFDFTTKGIMNTAVEGELWRLIDQQGKAPGVIG WWPAKAVTFVDNHDTGSTQQMWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGLKEQIA ALVAVRQRNGVTATSSLKIMLHDADAYVAEIDGKVVMKIGSRYDVSSLIPPGFHLAAHGN GYAVWEKIAAAAAAADHRTSSSASL

Transcript Sequence

Transcript ID	Os06t0713800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:30262971:30266841:1 gene:Os06g0713800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 2A description:Alpha-amylase isozyme 2A precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os06t0713800-01)
Sequence	ATCATCAAAACACCTGTAATCATCTTCTGAATTCATCAATTCAGAGTTCAGAGCAGAGTG TCCCTGCTTCTGTGCAGAGGAGAGAGATCGAGCTATAGAGCTAGCCTGGCTGCTGCCATG GCGACCGGACGACGCCTCTCCATGATCCTCCTCCTCCTCCTTCTCGGCTTGGCTTCCGGC GACAAGATTCTCTTCCAGGGGTTCAACTGGGAGTCGTGGAGGCAGAGCGGAGGGTGGTAC AACCTGCTGATGGGGAAGGTCGACGACATCGTCGCCGCCGGCGTCACGCACGTCTGGCTG CCGCCGCCGTCGCACTCCGTCTCCACGCAAGGGTACATGCCTGGGCGGCTGTACGACTTG GATGCGTCTAGGTACGGCACGTCGATGGAGTTGAAGTCGTTGATCAGCGCGCTCCACGGC AAGGGCATTCAGGCGATCGCTGACGTGGTGATCAACCACCGCTGCGCCGACTACAAGGAC AGCCGCGGCATCTACTGCATCTTTGAGGGCGGCACACCTGACGGCCGCCTCGACTGGGGC CCCCACATGATCTGCCGCGATGATACCCAGTTCTCCGACGGCACAGGCAACCTCGACACC GGCGCCGACTTCGCCGCTGCCCCCGACATTGACCACCTCAATGGTGTCGTCCAGCGGGAG CTCACCGACTGGCTCCTCTGGCTCAAGTCTGACGAGGTTGGCTTCGATGCGTGGCGGCTC GACTTCGCAAGGGGGTACTCGCCGGAGGTGGCCAAGGTGTACATTGAGGGGACAACGCCG GTGGGGTTGGCGGTGGCGGAGCTGTGGGACTCGATGGCGTACGGCGGAGACGGGAAGCCG GAGTACAATCAGGACGCACACCGGCAGGCGTTGGTGGACTGGGTGGACAGGGTGGGTGGG ACGGCGTCGGCGGGGATGGTGTTCGACTTCACGACGAAGGGGATCATGAACACGGCGGTG GAGGGGGAGCTGTGGCGGCTGATCGACCAGCAGGGGAAGGCACCGGGGGTGATCGGGTGG TGGCCGGCAAAGGCTGTCACCTTCGTCGACAACCACGACACTGGCTCGACGCAACAGATG TGGCCATTCCCCTCCGACAAGGTCATGCAGGGCTACGCCTACATCCTCACCCATCCCGGC AACCCATGCATCTTCTACGACCATTTCTTCGATTGGGGGTTAAAGGAGCAGATCGCGGCG CTGGTGGCGGTGAGGCAGCGGAACGGCGTGACGGCGACGAGCTCGCTCAAGATCATGCTG CACGACGCCGACGCCTACGTCGCCGAGATCGACGGCAAGGTGGTGATGAAGATCGGCTCC CGCTACGACGTCTCCAGCCTCATCCCGCCCGGCTTCCACCTCGCCGCCCACGGCAACGGC TACGCCGTCTGGGAGAAAATCGCCGCCGCCGCCGCCGCCGCCGATCATCGCACCTCTTCC AGCGCATCGCTCTGATTGATTAGCGATATGATGCTTGTGTGCCACCTCTTATGTTTTACT TCTGCTGTATATGGAACAGGCTCTTCTACCTTTAAAGGTACGTACTTTCGTCACTGATAT GTGGGATCGATAAACCATGGGTCTAACTGTTAGTGATAAAGCCATGATGACTTTGAAGAT ATAGGATTTCAATCCCTGTATATAGATAAGTACATATGTAATATACATACGCATGATTAG TGACATATATATACACTACATTGCCTTGGCTGTGATCG