Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0713400-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:30225297:30230658:-1 gene:Os06g0713400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 328 description:Cyclin-like F-box domain containing protein. (Os06t0713400-01)
Sequence	ATGTGTCTTCCTGCTGCAGCTGTGTATGGACTACTCATGATTTGTTTTGTTTTGTCACAT GCCTTCTTGCAGCAGCAGCCGCAACTTATGGAGAACGTGGCGGTGGCCAAGCGGAGCAGG CTGGAGCAACACCGCACGCTCAGTGACAACTCCTTCCGTGTGGAGGATCTCCCTGAGGAA ATTCAATCTCTTCTATTATCTCTGCTGTCACTGAAAGAGGCTGCTAGTACAAGCATCGTG TCGAGAAACTGGAGAAAACTTTGGACACGGTATCCTAATCTATGCTTTGATGGCAGCAAG GACGGGCCTGCTGATATGGATAGTGTGAAAATAGAAAGAATGAAGTTCATTGATACAGTA AATTCTATTATTCAGCAACACAGTGGAATAGGGCTCAATAAATTCAGTATCAGGTGCAAC CTTCTGAAGGACGACTCAGACATTCTTGATAGGTGGATTCGCTTTGCCACTGCATCAAAG GCTAAGATTATAGATATGAACCTGTGCACAAATAGAAATAATAAAGGACCAACCAAACAT TTGTATGACTTCCCTCTTGAGGCTTTCGGTGATCAAGATATCCCTTTTATCCAGTGCTTG TTTCTCAACAATGTTTCTATAAAGCCACACTCGGATATTGGCTTTACGAAACTCAGGAGC CTTCATTTGCACTGTGTTCAAATAATTGGAGATCTTTCAGGCTTGCTATTTAATTGCTCC AGTCTTGAGGACTTGGAGGTCTTTGCGTGCTTGGGTGTGACTGCTCTGAATATTCCACAC CAACTCAATAAACTTAGGCATTTGCTAATTTGTAATATGCGTATCCAGATGCTGGAGTTT CATGTTCCTGGTCTTTCTCATTTTGAATACAAAGGTACTATGATTCCTATAATGCTTCAT GGTTGCTCAAAATTACAGAAGGCAACCCTGAATTTTCACCAGACATGGCTTGAAGAAGAT AATAATAAAGTATTGGGCCATGTATTCCATGGAATTCCCAGTGTTTCGGCAGTTGAGGTG CTCAATTTACTTGTTGATATTTGCACAAAGCAATCGGTCTGGTCCTCACAGGTGCATACG TTGACAGCAAGACCAACAATCATGTTTATGAATTTGAAGCATCTGACTTATGAGATACTT ATTTTTACTAAAGATCCAAACAGCCACAGTGGAGTTCTTCAGCTGGCTCAGTATTTAGCT TTTGCACCGCAGCTGGAGACTCTAGAATTGCATATGTTGTATCATTCGACTCACTGCCGC TGCTGGCATGAGGGTGCGGGAGTCTCCTACGGACATATGCCCCATCATCACCTCAAGATG GTCTACATGAGTGGGTTCAGGTGCTACCGGGCTCAGGTCGAGCTGCTGTTTGCCATTCTT GAAATGGGTGATGAGCTTGAGCATGTGACCATTGATCCAATGACGAGAGTACCGTATAGC CCTGATTTGATGAATTTAGGCATACCTGAGGACGAGATATGTCAATGGGCGAACCGTACC TCACAACGGTTTGGTAAAGCAATCTCTGTTGTAAAACCTCCCTAG

Peptide Sequence

PEP ID	Os06t0713400-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:30225297:30230658:-1 gene:Os06g0713400 transcript:Os06t0713400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 328 description:Cyclin-like F-box domain containing protein. (Os06t0713400-01)
Sequence	MCLPAAAVYGLLMICFVLSHAFLQQQPQLMENVAVAKRSRLEQHRTLSDNSFRVEDLPEE IQSLLLSLLSLKEAASTSIVSRNWRKLWTRYPNLCFDGSKDGPADMDSVKIERMKFIDTV NSIIQQHSGIGLNKFSIRCNLLKDDSDILDRWIRFATASKAKIIDMNLCTNRNNKGPTKH LYDFPLEAFGDQDIPFIQCLFLNNVSIKPHSDIGFTKLRSLHLHCVQIIGDLSGLLFNCS SLEDLEVFACLGVTALNIPHQLNKLRHLLICNMRIQMLEFHVPGLSHFEYKGTMIPIMLH GCSKLQKATLNFHQTWLEEDNNKVLGHVFHGIPSVSAVEVLNLLVDICTKQSVWSSQVHT LTARPTIMFMNLKHLTYEILIFTKDPNSHSGVLQLAQYLAFAPQLETLELHMLYHSTHCR CWHEGAGVSYGHMPHHHLKMVYMSGFRCYRAQVELLFAILEMGDELEHVTIDPMTRVPYS PDLMNLGIPEDEICQWANRTSQRFGKAISVVKPP

Transcript Sequence

Transcript ID	Os06t0713400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:30225297:30230658:-1 gene:Os06g0713400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 328 description:Cyclin-like F-box domain containing protein. (Os06t0713400-01)
Sequence	TTGGGAGCCGGACAGCACTGGGCTGTTGTTGGCCTGCAGCTGCCTTCTCACTCCCACTCA CTGAATGATTGATTTCTGGCGAGGGATTGATTCTCCGTTCCTTTTGCTGAGGGGAAAATC TTGGATTTTAGGGGCTGTTCTAGCCTTCTGCTGAGGCCTCTTAGTTTTCCTGTTTTGTTC TGGGGCAGGTGGATTTCTGTTTTCTGGGGATTATTGGGGGAAATATTGTTCCTTGTTTAT TTCAGAAGTATTTGCAGGGGTAATACGACATTTTTTGGGGAGTAAAATAATGCTTTATAT ACTCTCAGAAATATACTGCCTAAAGTTTTTGTGGACAGAACCAGTCCAAATTTTTAAGTA GAGATTACTTGATCCCTATTACAGAGGTAAATGGTTCCAATTGAACGAATTACACAAGAA TATAGTATCCCATCGAGGTTTGGAGTTCAATATTGGTGCAAGGATTGGTTATATAATGTG TCTTCCTGCTGCAGCTGTGTATGGACTACTCATGATTTGTTTTGTTTTGTCACATGCCTT CTTGCAGCAGCAGCCGCAACTTATGGAGAACGTGGCGGTGGCCAAGCGGAGCAGGCTGGA GCAACACCGCACGCTCAGTGACAACTCCTTCCGTGTGGAGGATCTCCCTGAGGAAATTCA ATCTCTTCTATTATCTCTGCTGTCACTGAAAGAGGCTGCTAGTACAAGCATCGTGTCGAG AAACTGGAGAAAACTTTGGACACGGTATCCTAATCTATGCTTTGATGGCAGCAAGGACGG GCCTGCTGATATGGATAGTGTGAAAATAGAAAGAATGAAGTTCATTGATACAGTAAATTC TATTATTCAGCAACACAGTGGAATAGGGCTCAATAAATTCAGTATCAGGTGCAACCTTCT GAAGGACGACTCAGACATTCTTGATAGGTGGATTCGCTTTGCCACTGCATCAAAGGCTAA GATTATAGATATGAACCTGTGCACAAATAGAAATAATAAAGGACCAACCAAACATTTGTA TGACTTCCCTCTTGAGGCTTTCGGTGATCAAGATATCCCTTTTATCCAGTGCTTGTTTCT CAACAATGTTTCTATAAAGCCACACTCGGATATTGGCTTTACGAAACTCAGGAGCCTTCA TTTGCACTGTGTTCAAATAATTGGAGATCTTTCAGGCTTGCTATTTAATTGCTCCAGTCT TGAGGACTTGGAGGTCTTTGCGTGCTTGGGTGTGACTGCTCTGAATATTCCACACCAACT CAATAAACTTAGGCATTTGCTAATTTGTAATATGCGTATCCAGATGCTGGAGTTTCATGT TCCTGGTCTTTCTCATTTTGAATACAAAGGTACTATGATTCCTATAATGCTTCATGGTTG CTCAAAATTACAGAAGGCAACCCTGAATTTTCACCAGACATGGCTTGAAGAAGATAATAA TAAAGTATTGGGCCATGTATTCCATGGAATTCCCAGTGTTTCGGCAGTTGAGGTGCTCAA TTTACTTGTTGATATTTGCACAAAGCAATCGGTCTGGTCCTCACAGGTGCATACGTTGAC AGCAAGACCAACAATCATGTTTATGAATTTGAAGCATCTGACTTATGAGATACTTATTTT TACTAAAGATCCAAACAGCCACAGTGGAGTTCTTCAGCTGGCTCAGTATTTAGCTTTTGC ACCGCAGCTGGAGACTCTAGAATTGCATATGTTGTATCATTCGACTCACTGCCGCTGCTG GCATGAGGGTGCGGGAGTCTCCTACGGACATATGCCCCATCATCACCTCAAGATGGTCTA CATGAGTGGGTTCAGGTGCTACCGGGCTCAGGTCGAGCTGCTGTTTGCCATTCTTGAAAT GGGTGATGAGCTTGAGCATGTGACCATTGATCCAATGACGAGAGTACCGTATAGCCCTGA TTTGATGAATTTAGGCATACCTGAGGACGAGATATGTCAATGGGCGAACCGTACCTCACA ACGGTTTGGTAAAGCAATCTCTGTTGTAAAACCTCCCTAGGTGGTGTTGGTAGTCCTGTG CATATACGACTTATTACCACCTAGATAAGTGTTTGTTCAGATTCAGTACTGAAATTGCTG ACACAGGGGTTTCTGTTTTGTTTCCATGAGTAAATTGTTTTTTATTTTATTGTTTG