Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0713100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:30203062:30207064:-1 gene:Os06g0713100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1640 family protein. (Os06t0713100-01)
Sequence

ATGGCCGCAGCGGCTGTCGCGTGCAGGCGCGGGCTGCTCCTGCAGCAGCTGCAGCAGCAG
CTGTGGCAGGCGCACCGGTGGGTTGGCCCCGCGCGGAGCATCTCGCAGCTCGTCAAGACC
AACGGCCGCCGCGCCTTCCTCGTCGACACCCTCGCCCTGGTGAGGAAGCTGGAGTCGCAG
GGCGTGCCCACGAAGCAGGCGGAGGCGATCACCTCCGCGATCACGGAGGTCCTCAACGAC
AGCCTCGAGAGCATCTCCGAGTCCTTCGTCTCCAAGGCCGAGATGCAGAAGGCTGAGATG
CTGCAGGAGTCCAATATCTCCAAGTTCAAGTCGCAAGTGCAGAGCTCGCAGGAAAACCAT
TTCTCTTTGTTGCAGCGTGAGACTGAGAAACTCCGTGGAGATATTGATAAGATGAGGAGT
GAACTGAAGTATGAGATTGACAAGGTCACTGCAGGTCAGCGGCTGGATCTAAACCTTGAA
AGAGGGCGCATCCGTGATGAACTCGCCAAGCAGAATGAGGAAACTACAGAACTCACCACA
AAGCTAGACAAGGAAATTCACTCACTGAAAGCCCAGCTCGAGGCAGCAAAGTATGATGTC
ATCAAGTACTGCATAGGTACCATTGTTTCGATATCAGCTGTTGGACTCGCCGTGCTCCGC
ATTGTGATGTGA

Peptide Sequence

PEP ID

Os06t0713100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:30203062:30207064:-1 gene:Os06g0713100 transcript:Os06t0713100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1640 family protein. (Os06t0713100-01)
Sequence

MAAAAVACRRGLLLQQLQQQLWQAHRWVGPARSISQLVKTNGRRAFLVDTLALVRKLESQ
GVPTKQAEAITSAITEVLNDSLESISESFVSKAEMQKAEMLQESNISKFKSQVQSSQENH
FSLLQRETEKLRGDIDKMRSELKYEIDKVTAGQRLDLNLERGRIRDELAKQNEETTELTT
KLDKEIHSLKAQLEAAKYDVIKYCIGTIVSISAVGLAVLRIVM

Transcript Sequence

Transcript ID

Os06t0713100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:30203062:30207064:-1 gene:Os06g0713100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1640 family protein. (Os06t0713100-01)
Sequence

ACCTTTCCCAAAATTAGCACCCGCCTCCCTCCGCCAATCCCCACCACCGCCACCGACCTC
AAGCCAAATCCACCGCCGCCTCCTCCTCCTCCGCCTCGCTTCCCCCCCTTCCCCCTTCCC
TTCCCTTCCTCGGCGTCCCCTCCGCACCGGCTTGTGGGGGAGGAGTAGGAGGAGGAGATG
GCCGCAGCGGCTGTCGCGTGCAGGCGCGGGCTGCTCCTGCAGCAGCTGCAGCAGCAGCTG
TGGCAGGCGCACCGGTGGGTTGGCCCCGCGCGGAGCATCTCGCAGCTCGTCAAGACCAAC
GGCCGCCGCGCCTTCCTCGTCGACACCCTCGCCCTGGTGAGGAAGCTGGAGTCGCAGGGC
GTGCCCACGAAGCAGGCGGAGGCGATCACCTCCGCGATCACGGAGGTCCTCAACGACAGC
CTCGAGAGCATCTCCGAGTCCTTCGTCTCCAAGGCCGAGATGCAGAAGGCTGAGATGCTG
CAGGAGTCCAATATCTCCAAGTTCAAGTCGCAAGTGCAGAGCTCGCAGGAAAACCATTTC
TCTTTGTTGCAGCGTGAGACTGAGAAACTCCGTGGAGATATTGATAAGATGAGGAGTGAA
CTGAAGTATGAGATTGACAAGGTCACTGCAGGTCAGCGGCTGGATCTAAACCTTGAAAGA
GGGCGCATCCGTGATGAACTCGCCAAGCAGAATGAGGAAACTACAGAACTCACCACAAAG
CTAGACAAGGAAATTCACTCACTGAAAGCCCAGCTCGAGGCAGCAAAGTATGATGTCATC
AAGTACTGCATAGGTACCATTGTTTCGATATCAGCTGTTGGACTCGCCGTGCTCCGCATT
GTGATGTGAAGCACAGATACGTTCTTTCCTTTACCCATTCATCCATGGAAACTGCAAGAA
AGAGGATAGGTTGTGATTCTGTTCCTAGTTTTTTTGGAGGGGACAAAACGTGGTCAGGGG
AAATGTTGTACCATCATCCTATTAGGGAGGAGAAAAGAGGTGGTTCCTCAAAACTTGTAA
AAATAGATCGACCCGCAGGAGAAATGCAGCAACCAAAAATGATTCTTTTACCTTTGTGTT
TGTTGGAGCTTCTGATATTTGGTCA