Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0712900-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:30187150:30189238:-1 gene:Os06g0712900 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA-dihydrouridine synthase domain containing protein. (Os06t0712900-01)
Sequence

ATGCGATTCGCTCCCATCCTCCGGAACCCGCGCCGCCGCCGCCTCCTCCGCTCCGTAAAC
CCTAGCCTCGCCGCCATGTCGCCGCCGGCCGCCGCCCACCTCGCCACCGCCTCCGATCCC
GACGAGGACCTCTGCTTCACCACCGAATCGGTCGCGCCCGCGGAGGAGACCGCCCCGCCC
TTGCCCGCCCCTCCGCCGCCGGTGTCCGCGGAGGAGAGGGTGGAGCGCGCGTGGGCGCAC
TGGAGGCGGCTGGGCTCCCCGAAGATGGTGGTGGCGCCCATGGTGGACAACTCGGAGCTC
CCCTTCCGCATGCTGTGCCGCCGCTACGGGGCGACCGGGGCATACACGCCCATGCTCCAC
TCCCGCATCTTCTCCGAGAACGAGAAGCACAGGGCCATGGAGTTCACCACATGCAAGGAG
GACCGTCCACTTTTTGTTCAGTTTTGTGCAAATGATCCTGACATTTTGTTACAAGCAGCA
AAGATTGTGGAACCGTACTGCGACTATGTCGATATCAATTTTGGATGCCCACAGCGCATT
GCTAGAAGGGGGTACTATGGTGCGTTTCTCATGAACAACCTTCCTCTCGTAAAATCCCTT
GTACAGAATCTATCAGCAAACCTCCATGTTCCAGTATCATGCAAGATTCGCATATTCCCG
CGACTGGAGGACACACTGGCCTACGCAAAGATGCTTGAAGAAGCTGGTGCTTCTCTGGTA
GCTGTGCATGGGCGGACTAGAGATGAGAAGGATGGGAAGAAATTTCGAGCTGACTGGGAT
GCCATTAAAGCTGTCAAAGATGCTCTTAGGATACCTGTACTTGCAAATGGAAACATTCGC
CATTTGGATGATGTGAAGGATTGCCTTGAACATACTGGTGCTGATGGTGTGCTTTCAGCT
GAAACTCTTCTAGAAAATCCAGCATTGTTTGCTGGTTTCCGGACAAAGGAATGGAAAGAA
AATGGTGATGAAGATGAAGCTAGTGGCTTAGACCAGGCTGATCTAGTCATTGAGTATTTG
AAACTGTGCGAGCAGTACCCTGTTCCATGGAGAATGGTTCGATCCCATGTTCACAAGATG
CTAGGGGACTGGTTTAGGGTGCATCCTCAAGTGAGGGAGGAACTCAATGCTCAGTCCAAG
CTCACTTTCGAGTGGTTGCATGATATGGTAAAGAGGCTGAAGGATCTTGGTGGAGGAATA
CCGCTTTACAGAAACAATAATGCTTTACAGACTACATCAAATGGGCTAGCTGCAAGCAAC
GCCTGA

Peptide Sequence

PEP ID

Os06t0712900-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:30187150:30189238:-1 gene:Os06g0712900 transcript:Os06t0712900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA-dihydrouridine synthase domain containing protein. (Os06t0712900-01)
Sequence

MRFAPILRNPRRRRLLRSVNPSLAAMSPPAAAHLATASDPDEDLCFTTESVAPAEETAPP
LPAPPPPVSAEERVERAWAHWRRLGSPKMVVAPMVDNSELPFRMLCRRYGATGAYTPMLH
SRIFSENEKHRAMEFTTCKEDRPLFVQFCANDPDILLQAAKIVEPYCDYVDINFGCPQRI
ARRGYYGAFLMNNLPLVKSLVQNLSANLHVPVSCKIRIFPRLEDTLAYAKMLEEAGASLV
AVHGRTRDEKDGKKFRADWDAIKAVKDALRIPVLANGNIRHLDDVKDCLEHTGADGVLSA
ETLLENPALFAGFRTKEWKENGDEDEASGLDQADLVIEYLKLCEQYPVPWRMVRSHVHKM
LGDWFRVHPQVREELNAQSKLTFEWLHDMVKRLKDLGGGIPLYRNNNALQTTSNGLAASN
A

Transcript Sequence

Transcript ID

Os06t0712900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:30187150:30189238:-1 gene:Os06g0712900 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA-dihydrouridine synthase domain containing protein. (Os06t0712900-01)
Sequence

AGAGGCAAATCACTAGCATGCGATTCGCTCCCATCCTCCGGAACCCGCGCCGCCGCCGCC
TCCTCCGCTCCGTAAACCCTAGCCTCGCCGCCATGTCGCCGCCGGCCGCCGCCCACCTCG
CCACCGCCTCCGATCCCGACGAGGACCTCTGCTTCACCACCGAATCGGTCGCGCCCGCGG
AGGAGACCGCCCCGCCCTTGCCCGCCCCTCCGCCGCCGGTGTCCGCGGAGGAGAGGGTGG
AGCGCGCGTGGGCGCACTGGAGGCGGCTGGGCTCCCCGAAGATGGTGGTGGCGCCCATGG
TGGACAACTCGGAGCTCCCCTTCCGCATGCTGTGCCGCCGCTACGGGGCGACCGGGGCAT
ACACGCCCATGCTCCACTCCCGCATCTTCTCCGAGAACGAGAAGCACAGGGCCATGGAGT
TCACCACATGCAAGGAGGACCGTCCACTTTTTGTTCAGTTTTGTGCAAATGATCCTGACA
TTTTGTTACAAGCAGCAAAGATTGTGGAACCGTACTGCGACTATGTCGATATCAATTTTG
GATGCCCACAGCGCATTGCTAGAAGGGGGTACTATGGTGCGTTTCTCATGAACAACCTTC
CTCTCGTAAAATCCCTTGTACAGAATCTATCAGCAAACCTCCATGTTCCAGTATCATGCA
AGATTCGCATATTCCCGCGACTGGAGGACACACTGGCCTACGCAAAGATGCTTGAAGAAG
CTGGTGCTTCTCTGGTAGCTGTGCATGGGCGGACTAGAGATGAGAAGGATGGGAAGAAAT
TTCGAGCTGACTGGGATGCCATTAAAGCTGTCAAAGATGCTCTTAGGATACCTGTACTTG
CAAATGGAAACATTCGCCATTTGGATGATGTGAAGGATTGCCTTGAACATACTGGTGCTG
ATGGTGTGCTTTCAGCTGAAACTCTTCTAGAAAATCCAGCATTGTTTGCTGGTTTCCGGA
CAAAGGAATGGAAAGAAAATGGTGATGAAGATGAAGCTAGTGGCTTAGACCAGGCTGATC
TAGTCATTGAGTATTTGAAACTGTGCGAGCAGTACCCTGTTCCATGGAGAATGGTTCGAT
CCCATGTTCACAAGATGCTAGGGGACTGGTTTAGGGTGCATCCTCAAGTGAGGGAGGAAC
TCAATGCTCAGTCCAAGCTCACTTTCGAGTGGTTGCATGATATGGTAAAGAGGCTGAAGG
ATCTTGGTGGAGGAATACCGCTTTACAGAAACAATAATGCTTTACAGACTACATCAAATG
GGCTAGCTGCAAGCAACGCCTGATGATCACCTTCCAATTTTGATCATTCAACATATAGCT
TACCAATTTATCAACCAAGATTTTAGCAACAAAGCACTTGGTTTTAACTTACATCAGTAT
ACATCGAAACATCATTGTTGTAGTGCAACATCACATTTCCTGATAAGAAAGGAAGTTTTG
AGTAATCATTTTTACCTGTTGCTCAGTTAGCATGTTTTGAGCAACTACTACGATCACCTT
ATTATCTGTAACAACTGGTGTATAACTAATTCTATACTTGCATGC