Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0711800-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:30105940:30106833:-1 gene:Os06g0711800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os06t0711800-01)
Sequence

ATGTCTCGCTCCAGCCTCGCCATGGCGCTCCTCCTCGCCGCCTTCGCCGCCGCGGCGACG
GCGAACAGCGGCGCAGCGCCGGCGGCTAGCGACTTCATCCGCAAGTCGTGCCGCGCGACG
CAGTACCCGGCGGTGTGCGTGCAGAGCCTGGCGTCGTACGGCGGGGCCGGGGCGCCGCCG
CCGCGGAGCCCGCGCGAGCTGGCGCGCGCCGCGCTGTCGGTGAGCGTGGACAAGGCGCGG
TCGGCGTCGACGTACGTGGGGCACATATGCGGCCCTGGCGGCGGCCGCGGCGGCGCCGGC
GGCGCGGGCCCCGTGCGCGACTGCCTGGAGAACATGGCGGACAGCGTGGGGCACCTCCGC
GACGCGGCGCAGGAGCTCGGCGGCAACATGGGGCGCGCCGGCTCGCCGGGGTTCAAGTGG
CACCTGAGCAACGTCCAGACCTGGTGCAGCGCCGCCCTCACCGACGAGAACACCTGCCTC
GACGGCCTCTCCCGCGGCGTCGACGCCGCCACCCGCTCCGCCATCCGCGGTAAGATCGTC
GAGGTCGCCCAGGTCACCAGCAACGCCCTCGCCCTCGTCAACCGCGTCGCCCCCGCCAAT
TAA

Peptide Sequence

PEP ID

Os06t0711800-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:30105940:30106833:-1 gene:Os06g0711800 transcript:Os06t0711800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os06t0711800-01)
Sequence

MSRSSLAMALLLAAFAAAATANSGAAPAASDFIRKSCRATQYPAVCVQSLASYGGAGAPP
PRSPRELARAALSVSVDKARSASTYVGHICGPGGGRGGAGGAGPVRDCLENMADSVGHLR
DAAQELGGNMGRAGSPGFKWHLSNVQTWCSAALTDENTCLDGLSRGVDAATRSAIRGKIV
EVAQVTSNALALVNRVAPAN

Transcript Sequence

Transcript ID

Os06t0711800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:30105940:30106833:-1 gene:Os06g0711800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os06t0711800-01)
Sequence

AATCATTCAAGTGACCAAGCAAACACACAAAGCGCCACTGTGTAGCTCACTGCTCACTCA
TCAACCAACTTCCTCAATAATGTCTCGCTCCAGCCTCGCCATGGCGCTCCTCCTCGCCGC
CTTCGCCGCCGCGGCGACGGCGAACAGCGGCGCAGCGCCGGCGGCTAGCGACTTCATCCG
CAAGTCGTGCCGCGCGACGCAGTACCCGGCGGTGTGCGTGCAGAGCCTGGCGTCGTACGG
CGGGGCCGGGGCGCCGCCGCCGCGGAGCCCGCGCGAGCTGGCGCGCGCCGCGCTGTCGGT
GAGCGTGGACAAGGCGCGGTCGGCGTCGACGTACGTGGGGCACATATGCGGCCCTGGCGG
CGGCCGCGGCGGCGCCGGCGGCGCGGGCCCCGTGCGCGACTGCCTGGAGAACATGGCGGA
CAGCGTGGGGCACCTCCGCGACGCGGCGCAGGAGCTCGGCGGCAACATGGGGCGCGCCGG
CTCGCCGGGGTTCAAGTGGCACCTGAGCAACGTCCAGACCTGGTGCAGCGCCGCCCTCAC
CGACGAGAACACCTGCCTCGACGGCCTCTCCCGCGGCGTCGACGCCGCCACCCGCTCCGC
CATCCGCGGTAAGATCGTCGAGGTCGCCCAGGTCACCAGCAACGCCCTCGCCCTCGTCAA
CCGCGTCGCCCCCGCCAATTAAACATCTACTCCTCCTATAACTAATTAAGCTTTTGTTCT
TGGAATCTTGGTCGAGTTCATCTTCGTCATGGGTTAATTAGCTCAGTTAATCTCGATGCG
TCGTCGTTGCTATGGTTGTAACATATACTGTACTGCTAGTTAATTATCAAGACTTAATTA
AAAGAGTCGATGTAATATTGTAATGGTTGAGTCTTTACACCGAAGATGGTGAGG