Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0710800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:30059823:30062859:1 gene:Os06g0710800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0710800-01)
Sequence	ATGGATGCATACTACCTCGTCCGCCTCCATCTCCCTCCACCACTCCAGCTTCCACCCACC CTGCCTCTACCTCGAGGCCGCCATGACCGCCGCGTCGGTGGCGCCGTCGCGTGCCGCGCC ACCGCCGGCCCAGTGGGCAGCCAAGAGCGGCCGTGGGAGTCCTACGACCGCGGCATTCAG CACCACGCAGGCTCCGACCTCGCCTCCTCCCTCCGCCTGCTCGCCGACATGCAGGCCGCC GGGCTGCGCCCCAGCGGCGCGGCGTACGCGCGCCTCATCCGGGCGCTCGCCCGCGCCGGC CGGACGCTCGAGGCCGAGGCGCTCCTCCTCGAGATGCGCCGCCTCGGGCTCCGCCCGGAC GCCGCGCACTACAACGCCCTCCTCGAGGGGCTCCTCTCCACGGCGCACCTCCGCCTCGCC GACCGCCTCCTCCTCCAGATGGCCGACGACGGCGTCGCGCGGAACCGGCGCACGTACATG CTGCTGCTGAACGCGTACGCCCGGGCCGGCCGCCTCGAGGACTCGTGGTGGGTTCTCGGC GAGATGAAGCGCCGGGGTATTCGGCTTGACACCGCCGGGTACAGCACGCTGGTGCGGCTG TACAGGGACAATGGCATGTGGAAGAAGGCCACCGACCTCATCATGGAGATGCAGGAGCTC GGGGTGGAGCTCGATGTCAAGATTTACAACGGGTTGATCGATACATTCGGCAAGTATGGG CAGTTAGCGGATGCACGCAAGGTGTTCGACAAAATGTGCGCAGAAGGGGTCAAGCCTGAT ATTACTACATGGAATTCTTTGATTCGGTGGCATTGTCGTGTGGGGAATACGAAACGTGCT CTGCGATTCTTCGCTGCAATGCAGGAGGAAGGAATGTATCCGGATCCTAAAATCTTTGTT ACAATCATCAGCAGGTTGGGGGAACAGGGGAAGTGGGACGAAATTAAGAAGCTGTTTCAT GGCATGAGGAATCGAGGGCTCAAGGAGAGTGGTGCAGTGTATGCAGTTTTGGTTGACATT TATGGACAATACGGCCATTTTCGTGATGCCCATGACTGTGTAGCTGCTCTCAAAGCTGAG AATCTGCAGCTTTCACCTAGCATCTTTTGTGTCTTGGCCAATGCATATGCTCAACAGGGT TTGTGTGAACAAACTGTAAATGTTCTTCAATTGATGGAGGCAGAAGGAATTGAGCCAAAT CTTGTTATGCTGAATTTGCTAATAAATGCTTTTGGTACTGCTGGAAGGCATTTGGAGGCA CTTGCTGTACTCCAGCATATCAAGGATAGCGGTATGAGCCCAGATGTTGTGACTTACACA ACACTTATGAAGGCTTTCATGAGAGCAAAGAAATTTGAAAAGGTGTCAGAAGTATATAAG GAGATGGAGGGTGCTGGTTGTACTCCTGATAGAAAAGCTAGAGAAATGCTGAATGACGCC TCTATTGTACTGGAACAAAGGGGAATGTTACATTTGTAG

Peptide Sequence

PEP ID	Os06t0710800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:30059823:30062859:1 gene:Os06g0710800 transcript:Os06t0710800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0710800-01)
Sequence	MDAYYLVRLHLPPPLQLPPTLPLPRGRHDRRVGGAVACRATAGPVGSQERPWESYDRGIQ HHAGSDLASSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPD AAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLG EMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYG QLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFV TIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAE NLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEA LAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAGCTPDRKAREMLNDA SIVLEQRGMLHL

Transcript Sequence

Transcript ID	Os06t0710800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:30059823:30062859:1 gene:Os06g0710800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0710800-01)
Sequence	ATGGATGCATACTACCTCGTCCGCCTCCATCTCCCTCCACCACTCCAGCTTCCACCCACC CTGCCTCTACCTCGAGGCCGCCATGACCGCCGCGTCGGTGGCGCCGTCGCGTGCCGCGCC ACCGCCGGCCCAGTGGGCAGCCAAGAGCGGCCGTGGGAGTCCTACGACCGCGGCATTCAG CACCACGCAGGCTCCGACCTCGCCTCCTCCCTCCGCCTGCTCGCCGACATGCAGGCCGCC GGGCTGCGCCCCAGCGGCGCGGCGTACGCGCGCCTCATCCGGGCGCTCGCCCGCGCCGGC CGGACGCTCGAGGCCGAGGCGCTCCTCCTCGAGATGCGCCGCCTCGGGCTCCGCCCGGAC GCCGCGCACTACAACGCCCTCCTCGAGGGGCTCCTCTCCACGGCGCACCTCCGCCTCGCC GACCGCCTCCTCCTCCAGATGGCCGACGACGGCGTCGCGCGGAACCGGCGCACGTACATG CTGCTGCTGAACGCGTACGCCCGGGCCGGCCGCCTCGAGGACTCGTGGTGGGTTCTCGGC GAGATGAAGCGCCGGGGTATTCGGCTTGACACCGCCGGGTACAGCACGCTGGTGCGGCTG TACAGGGACAATGGCATGTGGAAGAAGGCCACCGACCTCATCATGGAGATGCAGGAGCTC GGGGTGGAGCTCGATGTCAAGATTTACAACGGGTTGATCGATACATTCGGCAAGTATGGG CAGTTAGCGGATGCACGCAAGGTGTTCGACAAAATGTGCGCAGAAGGGGTCAAGCCTGAT ATTACTACATGGAATTCTTTGATTCGGTGGCATTGTCGTGTGGGGAATACGAAACGTGCT CTGCGATTCTTCGCTGCAATGCAGGAGGAAGGAATGTATCCGGATCCTAAAATCTTTGTT ACAATCATCAGCAGGTTGGGGGAACAGGGGAAGTGGGACGAAATTAAGAAGCTGTTTCAT GGCATGAGGAATCGAGGGCTCAAGGAGAGTGGTGCAGTGTATGCAGTTTTGGTTGACATT TATGGACAATACGGCCATTTTCGTGATGCCCATGACTGTGTAGCTGCTCTCAAAGCTGAG AATCTGCAGCTTTCACCTAGCATCTTTTGTGTCTTGGCCAATGCATATGCTCAACAGGGT TTGTGTGAACAAACTGTAAATGTTCTTCAATTGATGGAGGCAGAAGGAATTGAGCCAAAT CTTGTTATGCTGAATTTGCTAATAAATGCTTTTGGTACTGCTGGAAGGCATTTGGAGGCA CTTGCTGTACTCCAGCATATCAAGGATAGCGGTATGAGCCCAGATGTTGTGACTTACACA ACACTTATGAAGGCTTTCATGAGAGCAAAGAAATTTGAAAAGGTGTCAGAAGTATATAAG GAGATGGAGGGTGCTGGTTGTACTCCTGATAGAAAAGCTAGAGAAATGCTGAATGACGCC TCTATTGTACTGGAACAAAGGGGAATGTTACATTTGTAGCCACCCTTTTGAATTCCAGGG ATGGATGCTTTGGCGGGTTATCGAAATTGGAATACCTACAATTCTGAAGTGGCTCAAGCT TCAATTTCTATAACTTGAAGAATACCATATCCCTTTTTTGCTTGCCATGCTGAATGTCTG AAACAGATACGATATATAGTAAACACAGGTGAGTTTTGGCTTGCTCAGGAATATATAGAC ACTTCTGCAGTTCTTTTTCTCCCTCAGTATTGTAAGATGTCACTCAATAAAATTTCTCCA AGCCTCCAATTATCTTTTTAATTTGTTTACTGCAGAGTGTGCCAAAAAAGACAGAAAGCA ACATTATTTAGAAAGAGAAGGTTAGGCTCCTTTCAAGAAAAAGAGAGAGAGAAAGTTAGG TCACAACTTTATGGAACATATCAACGTTTGAAATCTTGTATAGTTTATCCTACAACTGTA AGATGACCTCTTGCTTTAAACATTGCAATAGCTCGGCTCCTCTATTCGCTTCAGATTTAC CTATTACTAAATTTCATGGGAGAAAACAATGAGGCATCAAGCCCTCAATTTATCTTAAGC ATAGAAATAAGGTTCTCAT