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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0708600-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:29976876:29977647:1 gene:Os06g0708600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-like domain containing protein. (Os06t0708600-01)
Sequence

ATGACGGGGAAGGCGAAGCCGAAGAAGCACACGGCGAAGGAGATCGCGGCGAAGATCGAC
GCGGCGACGACGAACAGGGGCGGCGGGAAGGCCGGGCAGAAGGACCGGCTGGGGCAGGAC
AAGGGCGGCCACGCCAAGCTCGAGTGCCCTCTCTGCAAGACCACCGCCCCCGACATCAAG
TCCATGCAGATCCACCACGAGGCGCGCCACCCCAAGCTCCCCTTCGAGCCCGACAAGCTC
AACAACCTCCACGGCGGCGGCGCCGGCGCCGCCGCCGCCGCCGGTGAGGCCGCCGCCTCC
TCCTCCAAGCCCAAGCCCGGCGTCCGCGGCAGCCTCAAGAAGTAA

Peptide Sequence

PEP ID

Os06t0708600-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:29976876:29977647:1 gene:Os06g0708600 transcript:Os06t0708600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-like domain containing protein. (Os06t0708600-01)
Sequence

MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGQKDRLGQDKGGHAKLECPLCKTTAPDIK
SMQIHHEARHPKLPFEPDKLNNLHGGGAGAAAAAGEAAASSSKPKPGVRGSLKK

Transcript Sequence

Transcript ID

Os06t0708600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:29976876:29977647:1 gene:Os06g0708600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-like domain containing protein. (Os06t0708600-01)
Sequence

ATCAAACACAAATAGGGTTAGCGAGAATCGGCGGCGGCGGCGGCGGCGGCGAGAGCGGAG
AGAGACAGGAGGGGGCAACCGCGGCGGCGGCGGCGGGGGGGCGCGGAGATGACGGGGAAG
GCGAAGCCGAAGAAGCACACGGCGAAGGAGATCGCGGCGAAGATCGACGCGGCGACGACG
AACAGGGGCGGCGGGAAGGCCGGGCAGAAGGACCGGCTGGGGCAGGACAAGGGCGGCCAC
GCCAAGCTCGAGTGCCCTCTCTGCAAGACCACCGCCCCCGACATCAAGTCCATGCAGATC
CACCACGAGGCGCGCCACCCCAAGCTCCCCTTCGAGCCCGACAAGCTCAACAACCTCCAC
GGCGGCGGCGCCGGCGCCGCCGCCGCCGCCGGTGAGGCCGCCGCCTCCTCCTCCAAGCCC
AAGCCCGGCGTCCGCGGCAGCCTCAAGAAGTAACCGCAATCGAATCCATCATCACCCGAA
TCTGCTACTACTACCGCCCGCCGCCGCTCGCTCCGGTGTGCTTACTTGCTGCTGCTTGCT
GTTTTGAATTATTACTACTGTGTCATGATGTGCCGTGTGATAGATGCGTTGATTCGCGCA
CATATACATATGTGACCGTGTTCCGTCGCGTCTTCGTCGGCATGTTTTAGCTATGATGTT
TAGTTTATGTGTCACTACTCTATGATGCTGTCAATGGTGTCAATGGATGATAATGTTTAT
GTCTGTCACTGCTCAAACAATTGCTAAATCTGAGTAAAGAAAAAGGTGATGG