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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0705500-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:29808539:29811842:-1 gene:Os06g0705500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ataxin-2, C-terminal domain containing protein. (Os06t0705500-01)
Sequence

ATGGAAGGCCGGTCCCAGTTGAATCCAGATGCCAGTCCTTTCATACCTTCCTCACTAAGT
CTTTTCACATACAATGATTCTAAGAGACAAGCAGAGTCATCCTCGATGAACGATCCTTCT
GCTAGAGCTTGCCGTCCTTCCATGTGCGAGGAAAATGATATGGATCCACTTGCTTTGACC
AAATCTGTCCTTTTAATGTTCCCGAATATCTCTGAGGAATTCATTGATGAGTTACTCCAG
GCAAATGAATTTGACATATGTCTCACGGTTGATATGCTTCATGAGCTGAATTCACAAAAT
ATGCTTCATGGTGATGCCATAATGGGCTTCCCAACATTCCCAGATGTGAAGAAATTTCAC
GGCAACCTAGGCCTACCTGATGGTGATTTGTCTGAAAGCAACAGCAGTCTTGATCAATCT
CTTCAGAAGGGTATGTCACTGACGACTTCTGGTGCGAAATCTGCCTCGGCAATGATTCCA
GATAACATTTCTCTTCATGATAAACTGGGTGTACAGAAAGACGATAAGCCAGCAATTGCT
TCTACCACAAATTAA

Peptide Sequence

PEP ID

Os06t0705500-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:29808539:29811842:-1 gene:Os06g0705500 transcript:Os06t0705500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ataxin-2, C-terminal domain containing protein. (Os06t0705500-01)
Sequence

MEGRSQLNPDASPFIPSSLSLFTYNDSKRQAESSSMNDPSARACRPSMCEENDMDPLALT
KSVLLMFPNISEEFIDELLQANEFDICLTVDMLHELNSQNMLHGDAIMGFPTFPDVKKFH
GNLGLPDGDLSESNSSLDQSLQKGMSLTTSGAKSASAMIPDNISLHDKLGVQKDDKPAIA
STTN

Transcript Sequence

Transcript ID

Os06t0705500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:29808539:29811842:-1 gene:Os06g0705500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ataxin-2, C-terminal domain containing protein. (Os06t0705500-01)
Sequence

ACTCTATCCCATCTCTTCCCCGTTCCCACTTCGCCGGAGCACCACCGCGGCCACGGCGCG
CGACGCGAGCACCCACCCCGCCGCCGCCGGCGGCTGACCAACTTCCTCCTCGCCGCCTCC
CAATCATCTCGAGATTTTAACTGAACTCCTCTCTTGAACTTCACGAGTTTTTGTTCAACA
AAGAACAATGGAAGGCCGGTCCCAGTTGAATCCAGATGCCAGTCCTTTCATACCTTCCTC
ACTAAGTCTTTTCACATACAATGATTCTAAGAGACAAGCAGAGTCATCCTCGATGAACGA
TCCTTCTGCTAGAGCTTGCCGTCCTTCCATGTGCGAGGAAAATGATATGGATCCACTTGC
TTTGACCAAATCTGTCCTTTTAATGTTCCCGAATATCTCTGAGGAATTCATTGATGAGTT
ACTCCAGGCAAATGAATTTGACATATGTCTCACGGTTGATATGCTTCATGAGCTGAATTC
ACAAAATATGCTTCATGGTGATGCCATAATGGGCTTCCCAACATTCCCAGATGTGAAGAA
ATTTCACGGCAACCTAGGCCTACCTGATGGTGATTTGTCTGAAAGCAACAGCAGTCTTGA
TCAATCTCTTCAGAAGGGTATGTCACTGACGACTTCTGGTGCGAAATCTGCCTCGGCAAT
GATTCCAGATAACATTTCTCTTCATGATAAACTGGGTGTACAGAAAGACGATAAGCCAGC
AATTGCTTCTACCACAAATTAATCTGCAATGCATCCTGCTGTAGATTCTGTATTCTTTTA
CTGCTAGTTTGGGTGCCTGACTGAAAGTAGTGCAAAGTGCAGACAGTGCAAAACTGCAAA
CAATGATTGTCTTCTTAATCCATGTTTGAAGGACTACTTGGTTTTCTGGGTTTGAGCTTT
TGAAAGTGTGCATCGCAGTTTCAGTTTGCTTGTTAGTTGTTACCGAGAGTTGTATAGGTC
TTTTGATGTATTCGTCAGTCACTATTATGTACTCTGAACCCAGTGGATTGTGCAGCAGCG
GCAGCTCTCGTGTACCCCCTGCGAGTGCTACCTATGGTTGTC