Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0704100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:29733805:29737188:1 gene:Os06g0704100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF547 domain containing protein. (Os06t0704100-01)
Sequence

ATGCCGCCGCTGTCGCTGTCGGCCAAGGCGAGGAGGGGCTTCTCCTCGTCGTCGTCCTCC
GCCTCCGCCGCCGCGTCCTCCTGCAGGTCGCAGCTGGAGCAGGACGTGAAGAAGCTGCAG
AAGGCGCTGCAGGAGGAGACGACGCTGCACGCCATCCTCGAGAACGCGCTCCACCGCGCC
GCGCTCACTCTCGCCGACATGTCCTACCTCCCCACCAACGCACAGGAGCTGCTCTCCAAC
ATCTCCATCCTGGAAGGCACCATCTCCAAGCTGGAGGACGACATGGTGTCCCTGCATTTT
CAGCTCATCCAGGAGCGGAACGAGAGGAGGCTCGTCGAGTACCGCCTCAAGCAGGCGCCG
CCGCCACCGCAGCTGCAGCTGCAGCAGCCACGCTCCGTCTGCTCCTGCCACTCCACCAAA
TCCGAATCAGATGACACCGCAAACGAGAAGTCATGTAGAGTGGACAAGGTTTATCCTTTT
GCTGTCCTGCACGACTCAGCTATGAAACTACAGAGGCAGCTTTCATCCAAATGCTTTGGC
AATCCTAATCAGCTTTCGGAGGACATCGTTCGCTGCATGAAGAACATCTTCATTTCCTTG
TCAGATTCCTGCAGGGAGTCCTCGAGGACTCCCTCGACGGAGAAGCAGCAGTCTGGACCA
TCTCCTAGCGGAAACTATTCAATTTCTGCATTCTGGTCGCTGTCCGAACCAACTTCCATA
TCCTCCTGGGTGCAGAGTCCTCAGGTCGATTTGAACTACAACAATAATCTATTAGCTTCA
GAGACCGTCTTTGATCCGTACAAAGCTCGCGAGAAGCTTAGTTGGGCTGACATTGGGAGC
TACGGTGCAGCGGCTGAAGTTTCGTGGATGTCAGTTGGGAAGAAACAACTTGAGTATGCT
GCAGAATCACTAAGGAAATTCAGATTGCTGATTGAACAATTGGCAGAAGTAAACCCAATT
CACCTCGGTGATGACGCAAAGTTGGCATTTTGGATCAATTTATACAATGCACTGATGATG
CATGCTTATCTTGCTTATGGCGTTCCACGGAGTGACATAAAATTATTTTCCCTAATGCAA
AAGGCCGCATATACAATTGGAGGTCACTCATTCAGCGCTGCATTCATCGAGTATGTGATT
CTGAAGATGAAACCTCCAAATCATAGGCCACAAATGGCTCTGCTTCTTGCCCTTCAGAAG
ATAAAAGTGCCTGAGGAGCAGAAAAAGTTTTGCATTGGGTCACCTGAGCCACTCTTGACA
TTTGCTCTCAGCTGTGGATTGTACTCTTCTCCTGCGGTGAAGATATATACAGCAGGCAAT
GTAAGGGAAGAACTCCAAGATGCACAACGTGATTTTATTAGAGCATCGGTAGGAGTCAGT
CGAAAGGGGAAACTTCTGGTCCCTAAAATGCTGCACTGTTTTGCCCGCGGTTTTGTTGAC
GACAACAGCTTCCCTATCTGGATATCACATTTTCTACCTCAGCAGCAAGCTACTTTTGTT
GAGCACTGTGTGTCTCAAAGGCGGCAAAGTCTCCTGGGCACCCGCACATTTGGCATCATT
CCGTTTGATTCTAGATTTCGGTACCTCTTCTTGCCAGATATGGGATTTTCAAATTAA

Peptide Sequence

PEP ID

Os06t0704100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:29733805:29737188:1 gene:Os06g0704100 transcript:Os06t0704100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF547 domain containing protein. (Os06t0704100-01)
Sequence

MPPLSLSAKARRGFSSSSSSASAAASSCRSQLEQDVKKLQKALQEETTLHAILENALHRA
ALTLADMSYLPTNAQELLSNISILEGTISKLEDDMVSLHFQLIQERNERRLVEYRLKQAP
PPPQLQLQQPRSVCSCHSTKSESDDTANEKSCRVDKVYPFAVLHDSAMKLQRQLSSKCFG
NPNQLSEDIVRCMKNIFISLSDSCRESSRTPSTEKQQSGPSPSGNYSISAFWSLSEPTSI
SSWVQSPQVDLNYNNNLLASETVFDPYKAREKLSWADIGSYGAAAEVSWMSVGKKQLEYA
AESLRKFRLLIEQLAEVNPIHLGDDAKLAFWINLYNALMMHAYLAYGVPRSDIKLFSLMQ
KAAYTIGGHSFSAAFIEYVILKMKPPNHRPQMALLLALQKIKVPEEQKKFCIGSPEPLLT
FALSCGLYSSPAVKIYTAGNVREELQDAQRDFIRASVGVSRKGKLLVPKMLHCFARGFVD
DNSFPIWISHFLPQQQATFVEHCVSQRRQSLLGTRTFGIIPFDSRFRYLFLPDMGFSN

Transcript Sequence

Transcript ID

Os06t0704100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:29733805:29737188:1 gene:Os06g0704100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF547 domain containing protein. (Os06t0704100-01)
Sequence

ACTCTCTCCTCGCTCCCACTCCCACCCACACTGCTCACGCTGCCATTGTCGCAGTGTTTG
CACTTCATTCCATTCCATTCCACCTCCACTGCTTCGTCTTCTCTTCTCTTCTCCGAGTAC
GGTGACAGGGAGTGCAGGTTCGCGCGCCACCATGCCGCCGCTGTCGCTGTCGGCCAAGGC
GAGGAGGGGCTTCTCCTCGTCGTCGTCCTCCGCCTCCGCCGCCGCGTCCTCCTGCAGGTC
GCAGCTGGAGCAGGACGTGAAGAAGCTGCAGAAGGCGCTGCAGGAGGAGACGACGCTGCA
CGCCATCCTCGAGAACGCGCTCCACCGCGCCGCGCTCACTCTCGCCGACATGTCCTACCT
CCCCACCAACGCACAGGAGCTGCTCTCCAACATCTCCATCCTGGAAGGCACCATCTCCAA
GCTGGAGGACGACATGGTGTCCCTGCATTTTCAGCTCATCCAGGAGCGGAACGAGAGGAG
GCTCGTCGAGTACCGCCTCAAGCAGGCGCCGCCGCCACCGCAGCTGCAGCTGCAGCAGCC
ACGCTCCGTCTGCTCCTGCCACTCCACCAAATCCGAATCAGATGACACCGCAAACGAGAA
GTCATGTAGAGTGGACAAGGTTTATCCTTTTGCTGTCCTGCACGACTCAGCTATGAAACT
ACAGAGGCAGCTTTCATCCAAATGCTTTGGCAATCCTAATCAGCTTTCGGAGGACATCGT
TCGCTGCATGAAGAACATCTTCATTTCCTTGTCAGATTCCTGCAGGGAGTCCTCGAGGAC
TCCCTCGACGGAGAAGCAGCAGTCTGGACCATCTCCTAGCGGAAACTATTCAATTTCTGC
ATTCTGGTCGCTGTCCGAACCAACTTCCATATCCTCCTGGGTGCAGAGTCCTCAGGTCGA
TTTGAACTACAACAATAATCTATTAGCTTCAGAGACCGTCTTTGATCCGTACAAAGCTCG
CGAGAAGCTTAGTTGGGCTGACATTGGGAGCTACGGTGCAGCGGCTGAAGTTTCGTGGAT
GTCAGTTGGGAAGAAACAACTTGAGTATGCTGCAGAATCACTAAGGAAATTCAGATTGCT
GATTGAACAATTGGCAGAAGTAAACCCAATTCACCTCGGTGATGACGCAAAGTTGGCATT
TTGGATCAATTTATACAATGCACTGATGATGCATGCTTATCTTGCTTATGGCGTTCCACG
GAGTGACATAAAATTATTTTCCCTAATGCAAAAGGCCGCATATACAATTGGAGGTCACTC
ATTCAGCGCTGCATTCATCGAGTATGTGATTCTGAAGATGAAACCTCCAAATCATAGGCC
ACAAATGGCTCTGCTTCTTGCCCTTCAGAAGATAAAAGTGCCTGAGGAGCAGAAAAAGTT
TTGCATTGGGTCACCTGAGCCACTCTTGACATTTGCTCTCAGCTGTGGATTGTACTCTTC
TCCTGCGGTGAAGATATATACAGCAGGCAATGTAAGGGAAGAACTCCAAGATGCACAACG
TGATTTTATTAGAGCATCGGTAGGAGTCAGTCGAAAGGGGAAACTTCTGGTCCCTAAAAT
GCTGCACTGTTTTGCCCGCGGTTTTGTTGACGACAACAGCTTCCCTATCTGGATATCACA
TTTTCTACCTCAGCAGCAAGCTACTTTTGTTGAGCACTGTGTGTCTCAAAGGCGGCAAAG
TCTCCTGGGCACCCGCACATTTGGCATCATTCCGTTTGATTCTAGATTTCGGTACCTCTT
CTTGCCAGATATGGGATTTTCAAATTAACTGCCCTGACATGTTTCCCCATCCAGATAACA
TAGAAGCCTAACATGAGAAACACAGTGACCAAGTCTCCTGAGCAAACCTATTGGTTACAG
TTGAAACAAGCTTTTGCAGCAAGCAAGTATCTGGATTACAGTATTTCTTAAACAAGCAAA
TGCACATCCAGTGATCTTGGAAATGCAGGTTTGGTAAAATTTTGAATCGGTATAAGCACT
GGATTAAGATTGACATCTTTGGATGTCAGATGTAAAAAAAATCTTCAGCATGTCTTAATA
GGTTCCCTTGCCTCGACTTCTTGTCGAACTCAGCAAAACATGTTGTACATTGTATGTGTA
GTAGCAAATAAACAATGAAGTTAGTAAAGGAATTCACTG