Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0702500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:29626275:29634668:1 gene:Os06g0702500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:- description:Ribosomal protein S5 domain 2-type fold domain containing protein. (Os06t0702500-01);Similar to predicted protein. (Os06t0702500-02)
Sequence	ATGCCACCCGCCGGAGACGCCGCCCACGCGCCGCCGCCGCCGCACCGCCGCCTCGTCTTC GCCTTCTACCTCACCGGCCACGGCTTCGGCCACGCCACCCGCGCCATCGAGGTGGTGCGG CACCTGATCGCGGCGGGGCACGAGGTGCACGTGGCCACGGCGGTGCCGGAGTTCGTCTTC ACCGCCGAGCTGCCGCGCTCCCCGTCCTCCCAGGGCCTCCTCCACATCCGCAGGGCCATC CTCGACTGCGGCGCCGTCCAGACCGACGCCCTCACCGTCGACCCCCTCGCCTCCCTCCTC AAGTATCATGAGACGGCCGTGGTGCCCCGCGAGTCGATTTTGAGGACCGAGGCGGAGTGG CTCACCTCCATCAACGCAGACCTAGTGATCTCGGATGTTGTTCCTGTGGCCTGCAGGGTG GCTGCAGATGTTGGTATCCCCTCGGTCTGCATTGGGAATTTTAGTTGGGACTACATATAT GCAGAATATATTGTGGCATCTGGCGATCATCACCGTTCTATTGTTTGGCAGATAGCGGAG GATTATTCTCATTGTGATATCTTACTTCGACTACCTGGATACTGCCCTATGCCGGCTTTC CGTGATGTCACTGATGTGCCTCTTGTGGTAAGAGGGCTACGCAAATCTAGATCAGAGGTG AGGAAGGAACTTGGAATAGCAGAAAATGCGAAGGTGGTGGTTTTTAATTTTGGGGGACAG CCAGCAGGATGGAACCTGAAGCAAGAATGGCTGCCTGATGGCTGGATCTGTTTGGTCTGC GGTGCATCTGATTCTCAAGAGGTTCCTCCAAACTTCATTAAGCTTGCAAAAGATGCTTAC ACACCTGATGCTATGGCAGCATCTGACTGCATGCTTGGGAAAATTGGATATGGAACTGCA AGTGAGGCTTTGGCCTACAAGCTGCCATTTATCTTTGTCCGCAGAGATTATTTTAATGAA GAGCCATTTTTGCGGAATTTACTTGAGCACTACCAGAGCAGTATTGAAATGACCAGAAGG GACTTCCTTCATGGGCACTGGAAACCTTATCTACTCCGTGCTCTCACACTTCAACCATGC TATGATGGTCCAACAAATGGTGGTGAGGTGGCTGCACGAATCCTCGAGGACACTGCTGTT GGGAAGAAGTGTATTTCTGACAAATTCAATGGAGCAAGACGATTGCAAGACGCCATAGTG TTAGGGTATCAATTACAAAGGGCTCCAGGGAGAGATGTAGCGATTCCTGACTGGTATTCT CTTTCCGAGACAGAAGTTGGTGCCTGTCCAATCTCAGAAAATATTAAAACAAAAGAAAGC ACCGAATCATGTTTTGAAGACTTTGAGATACTTCATGGGGATCTGCAAGGATTACCAGAC ACCATGTCCTTTTTGAAGAGCTTATCTGAATTTAATCAAAGTGAGTTAAAGAGTAATGGG AAGCAACCTCAAGAGAGAATTGCTGCATCTGTGCTCTTTGACTGGGAGGAGGAAATGTAT ATAGCAAGGGCACCTGGTCGTTTAGATGTCATGGGTGGCATTGGTGACTATTCAGGAAGT CTAGTCTTGCAGCTGCCCCTTCGGGAAGCCTGTCATGTTGCTGTACAGAGGAACCACCCA AGCAATCAGAAGCTATGGGAAAATACACAGGCAAGACGGCTTGAGAACGGAGGCATGGAA CCTGTGGTACAAATAGTATCATTTGGGTCTGAATTGAGTAACCGTTCACCAACTTTTGAT ATGAAATTGTCAGATTTAATGGATGTCGACAAACCAATATCCTACGAGAAAGCCAGAGAA TTTTTTTGTCGCAACCCATCCCAGAAATGGGCTGCTTATGTCGCTGGAACAATTCTAGTG TTGATGACTGAGCTAGATGTGAAGTTCACTGACAGCATGAGCATTCTGGTTTCGTCTGAT GTGCCAGAAGGCAAAGGTGTTTCTTCTTCTGCATCAGTGGAGGTTGCAACTATGGCTGCT ATTGCAGCTGCCTATGGTCTAAACATTGCTCCAAGGGACCTCGCTTTGCTTTGTCAGAAG GTTGAGAATCATGTTGTCGGAGCTCCATGTGGAGTAATGGACCAAATGACATCTGCTTGT GGAGAAGCTAACAAACTCCTTGCGATGGTTTGCCAGCCTGCAGAAGTGAAGGAATTGGTT GCCATTCCTAATCATATGCGGTTTTGGGGTCTGGACTCAGGGATACGGCATAGTGTTGGT GGGGGAGATTACGGATCTGTAAGGGTAGGCACTTACATGGGACGAAAAATGATCAAGTGT GCAGCATCCGACTTAGCTTCAGAATCCTCAGTTTCTGATGCTCCTGTTCAATCTAATGAC TATAAACAAAATGCCATAGAACTACTGAAATCCGAAGCTTCCCTGGAGTATTTGTGCAAC ATACCACCTCACAGATATGAAGCTATTTATGCAAAAGATATTCCAGAGGTCATTACTGGA GATGCATTTTTGAAGAAATATGGAGATCACGATGATACAGTAACAGCAATTGACCCTAAA AGATCTTACAATGTGAAGGCTCCTACTAGGCATCCCATATATGAGAACTTTCGAGTTGAG ACCTTCAAAGCACTCTTAGAAGCAGCTAATACCGATGAGCAATTGTCAGCCCTTGGAGAA CTTATGTACCAGTGCCACTACAGCTATAATGCATGTGGTCTTGGTTCTGATGGGACTGAT CTGCTAGTTAATCTGGTACAAGAAATGCAGCACAGAAATATGTCAAAAGGTGAAAGTCCT AGTCTATTTGGTGCTAAGATTACCGGAGGAGGTTCCGGAGGCTCAGTTTGCGTCATGGGG AAAAACTGCCTCAAAAGCAGTGAGGAGATCATCGAGATTCAGCAAAGGTACAAGGCAGCA ACTGGCTACCTACCAATCCTATTCGATGGATCATCCCCAGGCGCTGCCAAATTCGGCTAC CTGAAGATCCGACGACGCCCCTCGTCACCAATTGCTGCCAAATGA

Peptide Sequence

PEP ID	Os06t0702500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:29626275:29634668:1 gene:Os06g0702500 transcript:Os06t0702500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:- description:Ribosomal protein S5 domain 2-type fold domain containing protein. (Os06t0702500-01);Similar to predicted protein. (Os06t0702500-02)
Sequence	MPPAGDAAHAPPPPHRRLVFAFYLTGHGFGHATRAIEVVRHLIAAGHEVHVATAVPEFVF TAELPRSPSSQGLLHIRRAILDCGAVQTDALTVDPLASLLKYHETAVVPRESILRTEAEW LTSINADLVISDVVPVACRVAADVGIPSVCIGNFSWDYIYAEYIVASGDHHRSIVWQIAE DYSHCDILLRLPGYCPMPAFRDVTDVPLVVRGLRKSRSEVRKELGIAENAKVVVFNFGGQ PAGWNLKQEWLPDGWICLVCGASDSQEVPPNFIKLAKDAYTPDAMAASDCMLGKIGYGTA SEALAYKLPFIFVRRDYFNEEPFLRNLLEHYQSSIEMTRRDFLHGHWKPYLLRALTLQPC YDGPTNGGEVAARILEDTAVGKKCISDKFNGARRLQDAIVLGYQLQRAPGRDVAIPDWYS LSETEVGACPISENIKTKESTESCFEDFEILHGDLQGLPDTMSFLKSLSEFNQSELKSNG KQPQERIAASVLFDWEEEMYIARAPGRLDVMGGIGDYSGSLVLQLPLREACHVAVQRNHP SNQKLWENTQARRLENGGMEPVVQIVSFGSELSNRSPTFDMKLSDLMDVDKPISYEKARE FFCRNPSQKWAAYVAGTILVLMTELDVKFTDSMSILVSSDVPEGKGVSSSASVEVATMAA IAAAYGLNIAPRDLALLCQKVENHVVGAPCGVMDQMTSACGEANKLLAMVCQPAEVKELV AIPNHMRFWGLDSGIRHSVGGGDYGSVRVGTYMGRKMIKCAASDLASESSVSDAPVQSND YKQNAIELLKSEASLEYLCNIPPHRYEAIYAKDIPEVITGDAFLKKYGDHDDTVTAIDPK RSYNVKAPTRHPIYENFRVETFKALLEAANTDEQLSALGELMYQCHYSYNACGLGSDGTD LLVNLVQEMQHRNMSKGESPSLFGAKITGGGSGGSVCVMGKNCLKSSEEIIEIQQRYKAA TGYLPILFDGSSPGAAKFGYLKIRRRPSSPIAAK

Transcript Sequence

Transcript ID	Os06t0702500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:29626275:29634668:1 gene:Os06g0702500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:- description:Ribosomal protein S5 domain 2-type fold domain containing protein. (Os06t0702500-01);Similar to predicted protein. (Os06t0702500-02)
Sequence	CCATCCATTTTTCTTCCCTTTCCGATCCAAAAGCTTCCTTCCCTTCCGCCACCACACCAT GCCACCCGCCGGAGACGCCGCCCACGCGCCGCCGCCGCCGCACCGCCGCCTCGTCTTCGC CTTCTACCTCACCGGCCACGGCTTCGGCCACGCCACCCGCGCCATCGAGGTGGTGCGGCA CCTGATCGCGGCGGGGCACGAGGTGCACGTGGCCACGGCGGTGCCGGAGTTCGTCTTCAC CGCCGAGCTGCCGCGCTCCCCGTCCTCCCAGGGCCTCCTCCACATCCGCAGGGCCATCCT CGACTGCGGCGCCGTCCAGACCGACGCCCTCACCGTCGACCCCCTCGCCTCCCTCCTCAA GTATCATGAGACGGCCGTGGTGCCCCGCGAGTCGATTTTGAGGACCGAGGCGGAGTGGCT CACCTCCATCAACGCAGACCTAGTGATCTCGGATGTTGTTCCTGTGGCCTGCAGGGTGGC TGCAGATGTTGGTATCCCCTCGGTCTGCATTGGGAATTTTAGTTGGGACTACATATATGC AGAATATATTGTGGCATCTGGCGATCATCACCGTTCTATTGTTTGGCAGATAGCGGAGGA TTATTCTCATTGTGATATCTTACTTCGACTACCTGGATACTGCCCTATGCCGGCTTTCCG TGATGTCACTGATGTGCCTCTTGTGGTAAGAGGGCTACGCAAATCTAGATCAGAGGTGAG GAAGGAACTTGGAATAGCAGAAAATGCGAAGGTGGTGGTTTTTAATTTTGGGGGACAGCC AGCAGGATGGAACCTGAAGCAAGAATGGCTGCCTGATGGCTGGATCTGTTTGGTCTGCGG TGCATCTGATTCTCAAGAGGTTCCTCCAAACTTCATTAAGCTTGCAAAAGATGCTTACAC ACCTGATGCTATGGCAGCATCTGACTGCATGCTTGGGAAAATTGGATATGGAACTGCAAG TGAGGCTTTGGCCTACAAGCTGCCATTTATCTTTGTCCGCAGAGATTATTTTAATGAAGA GCCATTTTTGCGGAATTTACTTGAGCACTACCAGAGCAGTATTGAAATGACCAGAAGGGA CTTCCTTCATGGGCACTGGAAACCTTATCTACTCCGTGCTCTCACACTTCAACCATGCTA TGATGGTCCAACAAATGGTGGTGAGGTGGCTGCACGAATCCTCGAGGACACTGCTGTTGG GAAGAAGTGTATTTCTGACAAATTCAATGGAGCAAGACGATTGCAAGACGCCATAGTGTT AGGGTATCAATTACAAAGGGCTCCAGGGAGAGATGTAGCGATTCCTGACTGGTATTCTCT TTCCGAGACAGAAGTTGGTGCCTGTCCAATCTCAGAAAATATTAAAACAAAAGAAAGCAC CGAATCATGTTTTGAAGACTTTGAGATACTTCATGGGGATCTGCAAGGATTACCAGACAC CATGTCCTTTTTGAAGAGCTTATCTGAATTTAATCAAAGTGAGTTAAAGAGTAATGGGAA GCAACCTCAAGAGAGAATTGCTGCATCTGTGCTCTTTGACTGGGAGGAGGAAATGTATAT AGCAAGGGCACCTGGTCGTTTAGATGTCATGGGTGGCATTGGTGACTATTCAGGAAGTCT AGTCTTGCAGCTGCCCCTTCGGGAAGCCTGTCATGTTGCTGTACAGAGGAACCACCCAAG CAATCAGAAGCTATGGGAAAATACACAGGCAAGACGGCTTGAGAACGGAGGCATGGAACC TGTGGTACAAATAGTATCATTTGGGTCTGAATTGAGTAACCGTTCACCAACTTTTGATAT GAAATTGTCAGATTTAATGGATGTCGACAAACCAATATCCTACGAGAAAGCCAGAGAATT TTTTTGTCGCAACCCATCCCAGAAATGGGCTGCTTATGTCGCTGGAACAATTCTAGTGTT GATGACTGAGCTAGATGTGAAGTTCACTGACAGCATGAGCATTCTGGTTTCGTCTGATGT GCCAGAAGGCAAAGGTGTTTCTTCTTCTGCATCAGTGGAGGTTGCAACTATGGCTGCTAT TGCAGCTGCCTATGGTCTAAACATTGCTCCAAGGGACCTCGCTTTGCTTTGTCAGAAGGT TGAGAATCATGTTGTCGGAGCTCCATGTGGAGTAATGGACCAAATGACATCTGCTTGTGG AGAAGCTAACAAACTCCTTGCGATGGTTTGCCAGCCTGCAGAAGTGAAGGAATTGGTTGC CATTCCTAATCATATGCGGTTTTGGGGTCTGGACTCAGGGATACGGCATAGTGTTGGTGG GGGAGATTACGGATCTGTAAGGGTAGGCACTTACATGGGACGAAAAATGATCAAGTGTGC AGCATCCGACTTAGCTTCAGAATCCTCAGTTTCTGATGCTCCTGTTCAATCTAATGACTA TAAACAAAATGCCATAGAACTACTGAAATCCGAAGCTTCCCTGGAGTATTTGTGCAACAT ACCACCTCACAGATATGAAGCTATTTATGCAAAAGATATTCCAGAGGTCATTACTGGAGA TGCATTTTTGAAGAAATATGGAGATCACGATGATACAGTAACAGCAATTGACCCTAAAAG ATCTTACAATGTGAAGGCTCCTACTAGGCATCCCATATATGAGAACTTTCGAGTTGAGAC CTTCAAAGCACTCTTAGAAGCAGCTAATACCGATGAGCAATTGTCAGCCCTTGGAGAACT TATGTACCAGTGCCACTACAGCTATAATGCATGTGGTCTTGGTTCTGATGGGACTGATCT GCTAGTTAATCTGGTACAAGAAATGCAGCACAGAAATATGTCAAAAGGTGAAAGTCCTAG TCTATTTGGTGCTAAGATTACCGGAGGAGGTTCCGGAGGCTCAGTTTGCGTCATGGGGAA AAACTGCCTCAAAAGCAGTGAGGAGATCATCGAGATTCAGCAAAGGTACAAGGCAGCAAC TGGCTACCTACCAATCCTATTCGATGGATCATCCCCAGGCGCTGCCAAATTCGGCTACCT GAAGATCCGACGACGCCCCTCGTCACCAATTGCTGCCAAATGAAGAGATTGGCTTTCAGT TTGTCGTGCAACTCGGTCTGTCAATGAGTTTCATCAAGACCGTTGATTGAAAACATTGTG CCATCCTGTCAACTGCAATTGTTCGTTCATTGATTAATTGCTCCATTCTGGGGCACAGTC GTTGCAATTGTAGATTTCGTGTGACAGCCAATTCGTTGGGTTGCTTTCGTGTGGAACTGT GAAAATGTGAAATACTGGATTCTTCTGAAAGAAAAATGCTACTACTATTCGCGAAATCTG GTGGCTGCAAATCGAGGAGAGGACGACGGCCGGCGACACCTATCTGCCTCGCATCGAGAG CCGCAGCCCATCGCGCCGGTGGGCAGAATCTGCATCCGCGATCTCCTCTTCCTCGTGGGG GTCTTGACGATGGCGATGAGCCGATCCAGGCACCGGCAAAAGTGGGCGGTGATGGAGCAC TCGAGCAGAGGAAGGGGGAGAGAAGAGGGATGAGAGGGGGTTGACCCACTGACATGTGGG TCCCACTGTTTTAGCTTTTTATTTGAGTACCAGGTGGAACCCACCTATTTTGTTTTTACT TTTTAAATTTTTAATTCTAGCTTCTAATGCCACGTCAACGTCATGT