Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0700500-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:29462543:29465909:-1 gene:Os06g0700500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF266, plant family protein. (Os06t0700500-01);Protein of unknown function DUF266, plant family protein. (Os06t0700500-02)
Sequence

ATGGCACCGCGCAACAGGTCTTCAGCTAGAAGGCCTCTCTGGATTGTCATCTTGATTGCT
TTTGTCTGTGCAGTAGGCATTGGAGCCTATCTTTATACACCCCAGCATTACACACCTTGT
TACTTGGTGTCATCAAATTCCTGTAGTTCTCGGCCTCCTCCAGAACCTGCTAGGGTTTAC
ACTGATGATGAGATTGCTGCTCGTATTGTCATAAGAGATATCATTTTGGCACAGCCAGTT
CAGTCAAAGAATCCAAAAATTGCTTTCATGTTCTTGACACCCAGTTCATTGCCATTCGAG
AAGCTTTGGGAAAAGTTCTTCATGGGGCATGAAGACAGATATACCATATATGTACATGCA
TCAAGAGAAAGGCCTGTTCACGCTAGTCCGATATTTAATGGCAGAGATATTCGAAGTGAA
AAGGTAGTCTGGGGCACAATTTCAATGATTGATGCAGAGAGGAGGCTTTTGGCTAATGCA
CTGCAAGATCCTGATAACCAGCATTTTGTCTTGCTCTCTGAGAGCTGTGTACCACTTCAT
AACTTTGATTATGTATATAGCTATCTTATGGAAACAAATATCAGCTTTGTTGACTGTTTT
GACGATCCTGGTCCACATGGAGCAGGCAGATATTCTGATCATATGCTACCTGAAATTGTT
AAGAGAGATTGGAGAAAAGGTGCACAGTGGTTCACAGTGAAACGTCAGCATGCAGTTCTT
ATTCTTTCCGATTTCCTTTACTATGCAAAGTTCAAGCGGTACTGTAAGCCGGGAAACGAA
TGGCATAACTGCTATTCTGATGAACACTATTTGCCAACCCTCTTTAATATGGTTGATCCA
ACTGGAATTGCAAATTGGTCAGTGACACATGTTGATTGGTCTGAAGGAAAATGGCATCCT
AAAGCTTACAGGGCTGTTGACACAAGCTTTGAACTGCTTAAGAATATTTCGTCCATTGAT
GAGAGTATTCATGTTACAAGCAATGCAAAGCACCAAGTGATGAGAAGACCGTGCCTATGG
AATGGCATGAAGAGGCCTTGCTACCTATTTGCACGGAAATTCTATCCCGAGGCACTCGAC
AATCTGATGAACATTTTCTCAAACTTCACTATCATCTAA

Peptide Sequence

PEP ID

Os06t0700500-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:29462543:29465909:-1 gene:Os06g0700500 transcript:Os06t0700500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF266, plant family protein. (Os06t0700500-01);Protein of unknown function DUF266, plant family protein. (Os06t0700500-02)
Sequence

MAPRNRSSARRPLWIVILIAFVCAVGIGAYLYTPQHYTPCYLVSSNSCSSRPPPEPARVY
TDDEIAARIVIRDIILAQPVQSKNPKIAFMFLTPSSLPFEKLWEKFFMGHEDRYTIYVHA
SRERPVHASPIFNGRDIRSEKVVWGTISMIDAERRLLANALQDPDNQHFVLLSESCVPLH
NFDYVYSYLMETNISFVDCFDDPGPHGAGRYSDHMLPEIVKRDWRKGAQWFTVKRQHAVL
ILSDFLYYAKFKRYCKPGNEWHNCYSDEHYLPTLFNMVDPTGIANWSVTHVDWSEGKWHP
KAYRAVDTSFELLKNISSIDESIHVTSNAKHQVMRRPCLWNGMKRPCYLFARKFYPEALD
NLMNIFSNFTII

Transcript Sequence

Transcript ID

Os06t0700500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:29462543:29465909:-1 gene:Os06g0700500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF266, plant family protein. (Os06t0700500-01);Protein of unknown function DUF266, plant family protein. (Os06t0700500-02)
Sequence

GAATGTAGATTGTGAAGTTCTCCTTTCCTGCGTACGGCCATATACACTTTTATCATGGCA
CCGCGCAACAGGTCTTCAGCTAGAAGGCCTCTCTGGATTGTCATCTTGATTGCTTTTGTC
TGTGCAGTAGGCATTGGAGCCTATCTTTATACACCCCAGCATTACACACCTTGTTACTTG
GTGTCATCAAATTCCTGTAGTTCTCGGCCTCCTCCAGAACCTGCTAGGGTTTACACTGAT
GATGAGATTGCTGCTCGTATTGTCATAAGAGATATCATTTTGGCACAGCCAGTTCAGTCA
AAGAATCCAAAAATTGCTTTCATGTTCTTGACACCCAGTTCATTGCCATTCGAGAAGCTT
TGGGAAAAGTTCTTCATGGGGCATGAAGACAGATATACCATATATGTACATGCATCAAGA
GAAAGGCCTGTTCACGCTAGTCCGATATTTAATGGCAGAGATATTCGAAGTGAAAAGGTA
GTCTGGGGCACAATTTCAATGATTGATGCAGAGAGGAGGCTTTTGGCTAATGCACTGCAA
GATCCTGATAACCAGCATTTTGTCTTGCTCTCTGAGAGCTGTGTACCACTTCATAACTTT
GATTATGTATATAGCTATCTTATGGAAACAAATATCAGCTTTGTTGACTGTTTTGACGAT
CCTGGTCCACATGGAGCAGGCAGATATTCTGATCATATGCTACCTGAAATTGTTAAGAGA
GATTGGAGAAAAGGTGCACAGTGGTTCACAGTGAAACGTCAGCATGCAGTTCTTATTCTT
TCCGATTTCCTTTACTATGCAAAGTTCAAGCGGTACTGTAAGCCGGGAAACGAATGGCAT
AACTGCTATTCTGATGAACACTATTTGCCAACCCTCTTTAATATGGTTGATCCAACTGGA
ATTGCAAATTGGTCAGTGACACATGTTGATTGGTCTGAAGGAAAATGGCATCCTAAAGCT
TACAGGGCTGTTGACACAAGCTTTGAACTGCTTAAGAATATTTCGTCCATTGATGAGAGT
ATTCATGTTACAAGCAATGCAAAGCACCAAGTGATGAGAAGACCGTGCCTATGGAATGGC
ATGAAGAGGCCTTGCTACCTATTTGCACGGAAATTCTATCCCGAGGCACTCGACAATCTG
ATGAACATTTTCTCAAACTTCACTATCATCTAAGGGAAGGATGAATCAAAAACCTAGTTT
GCATGTAACACTACAGTATAGGCCTTGGAAAATCAGAAACCCAGAGAGACTCGCTGAATT
GTTTTTTGTGATCTCTCTTGGAACATCAAATGATTTTCCTTTTTCGCGAAGATGTTGCAT
GGTTTGCAGTTGAAAGAGCAGTCAAATTTGTTCCTCACTGCGCTGTTCTGAGC