Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0699900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:29423376:29431536:-1 gene:Os06g0699900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 1B description:Proteasome/cyclosome, regulatory subunit domain containing protein. (Os06t0699900-01)
Sequence	ATGCCGCCGCGCGAGGACCCCAACGGGGACGCCTCCTCCGCCTCCCCCTCGGACCCCGTC CCGCCTCCGCCGCAGCAGCCGCAGCCGCAGCCGGCCAAGGGCAAGGGGAAGAAGAAGGAT GAGAAGAAGGACGACGACCTGTCGGAGGAGGACCAGGCGCTCAAGGAGCAGCTCGAGCTC TACGTGGTGCGGGCGCAGGACACCGATCCCGGCGTCCAGAAGCTCGCCCTCGAGAGCATG AGGCAGGAGATCCGTTCTGCGACAAGTTCAATGACCTCTGTCCCAAAGCCTCTCAAATTC CTTCGCCCGCACTATGGAACTCTCAAGGCTTACTTTGAGACAATGCCAGAATCTGATCTG AAGAAGTATATGGCTGATATTTTGTCAGTATTGGCCCTGACAATGTCCGCTGAAGGAGAA AGAGAGAGCCTCAACTACCGAATGATAGGCTCTGAAGGTGACATTGGTTCATGGGGTCAT GAATATGTGAGAAACTTGGCTGGTGAAATTGCACAGGAATTCCAGAAGCGCCAGGATGAT GGCATGCCAACTGATTCCCTGAAGGAACTGGTGGAGCAAATCGTTTCATTCCACATGAAG CATAATGCTGAACCTGAAGCTGTGGATCTTCTAATGGAGGTCGAAAAGCTTGATTTGCTA GTTAAGCACGTTGACTCCACGAACTACAAAAGGACCTGCTTGTACCTCACTAGTTCTTCT AAATATCTTCCTGCTCCTGATGACATGTCGGCACTTAAAATAGCTTTTGAGATTTACATG AAATTTGGAGATTTTGCAAATGCTTTGCGTATTGCACTTCTGCTTTATGACAAGTCCCTG GAGTTGAAGCCGATTTTTACAGCAACTGATGATTTTCAACTGAAGAAGCAATTCGCGTTT ATCATAGCACGCCATGGTTTAAGCATCGAGATTGATGATGACATAGCTGCTGATGAAAAT GAGAAGGAGGCTTTGCAGGACATAATTTCTAATATTAAATTGAGTGAGGGGTACCTTACA CTTGCACGAGATATTGAGGTCATGGAGCCAAAATCTCCAGAAGACATATATAAGGTTCAT TTGATTGATGGCCGAGGGGCTACAAGCTCCAGTCTTGATTCCGCAAGACAGAATCTGGCG GCAACATTTGTCAATGCATTCGTGAATGCTGGATTTGGCCAGGATAAACTCATGACCACA CCATCAGATTCTTCAAGCAGTGGTTCTTCTGGAAACTGGTTATTCAAGAACAAGGAACAT GGGAAAGCTAGTGCAGCCGCTAGCCTGGGAATGATTCTTCTGTGGGATTCTGATTCAGGA CTTGCCCAACTTGACAAGTACCTGCACAGCAATGATATTCATGTTGTTGCTGGGGCTTTG CTAGGGATTGGAATTGTTTCTTGTGGTGTGAAGAGTGACTGTGATCCGGCATTTGCTCTC ATTTCTGAGTATTTCAGCAGGGATGAGTCAATTATACGAATTGGAGCAATCCTTGGTCTT GGTATTGCTTATGCTGGCTCCCAGAAAGAGGAGGTTAGAGAGAATCTCACAGCTTTTCTG ACTGACTCCCAAGTACCTCTGGAGGTCTTGGTCTTCTCTGCCATCTCCTTAGGTTTGGTG TTCGTTGGTTCCTGTAATGAAGAGGTTGCACAGACAATCATATGCGTCTTAATGGAGCGT AGTGAACCAGAGCTTGCAGAGCCAATTATGCGCTTGCTTCCTGTTGCCCTTGGCCTTCTA TATCTTGGAAAGCAGGAAAGTGTGGAGGCGACTGCAGAGGTTTCTAAAACCTTTGATGAG AAGATAAGGAATTATTGTGACGTGACATTGATGTCACTGGCATATGCTGGGACAGGGAAC GTGCTTAAGGTTCAGAAACTCCTTGGAATTTGCTCCGAGCATCTTGAGAAAGGTGAAACC CACCAAGGGCCAGCAGTTCTTGGAATCTCCCTAATTGCCATGGCTGAAGAATTAGGGGCG GAAATGGCTGTACGTTCCCTTGAGCGTCTTTTACAGTATGGCGAGCAGAATATTAGAAGG GCGGTTCCTCTAGCTCTGGGTTTGCTTTGCATATCCAATCCAAAGGTAAATGTTATGGAC ACAATGAGTAGACTGAGCCATGATGCAGATGCGGAAGTTTCTATGGCTGCAATCATCTCC CTGGGCTTGATAGGGGCTGGTACAAACAATGCCCGTATAGCTGGGATGCTTCGGAACCTC TCAAGTTATTATTACAAAGAAGCAGGACATCTGTTTTGTGTGAGGATTGCTCAAGGTCTT GTTCACCTTGGGAAGGGTTTGCTGACCCTTTCACCATATCACTCTGACCGGTTCCTTCTG TCCCCCATAGCACTTGCTGGTCTTGTGACGGTTCTGCATGCCTGTCTTGACATGAAATCC ATCATTCTGGGGAAGTACCATTACATGCTTTATATCCTTACCCTAGCTATGCAGCCTAGG ATGCTATTGACTGTGGATGAGGATCTCAAGCCCCTCTCTGTTCCGGTACGTGTTGGCCAA GCAGTTGATGTCGTCGGTCAGGCAGGTAGACCCAAGACAATCACTGGATTCCAGACACAT TCAACGCCTGTATTACTTGCTGCAGGGGAGCGAGCAGAGCTGGCAACTGAAAAATATCTT CCACTGACACCAGTTCTTGAGGGTTTTGTGATCCTAAGGAAGAACCCAGAATACCATGAA GATTAA

Peptide Sequence

PEP ID	Os06t0699900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:29423376:29431536:-1 gene:Os06g0699900 transcript:Os06t0699900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 1B description:Proteasome/cyclosome, regulatory subunit domain containing protein. (Os06t0699900-01)
Sequence	MPPREDPNGDASSASPSDPVPPPPQQPQPQPAKGKGKKKDEKKDDDLSEEDQALKEQLEL YVVRAQDTDPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKAYFETMPESDL KKYMADILSVLALTMSAEGERESLNYRMIGSEGDIGSWGHEYVRNLAGEIAQEFQKRQDD GMPTDSLKELVEQIVSFHMKHNAEPEAVDLLMEVEKLDLLVKHVDSTNYKRTCLYLTSSS KYLPAPDDMSALKIAFEIYMKFGDFANALRIALLLYDKSLELKPIFTATDDFQLKKQFAF IIARHGLSIEIDDDIAADENEKEALQDIISNIKLSEGYLTLARDIEVMEPKSPEDIYKVH LIDGRGATSSSLDSARQNLAATFVNAFVNAGFGQDKLMTTPSDSSSSGSSGNWLFKNKEH GKASAAASLGMILLWDSDSGLAQLDKYLHSNDIHVVAGALLGIGIVSCGVKSDCDPAFAL ISEYFSRDESIIRIGAILGLGIAYAGSQKEEVRENLTAFLTDSQVPLEVLVFSAISLGLV FVGSCNEEVAQTIICVLMERSEPELAEPIMRLLPVALGLLYLGKQESVEATAEVSKTFDE KIRNYCDVTLMSLAYAGTGNVLKVQKLLGICSEHLEKGETHQGPAVLGISLIAMAEELGA EMAVRSLERLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTMSRLSHDADAEVSMAAIIS LGLIGAGTNNARIAGMLRNLSSYYYKEAGHLFCVRIAQGLVHLGKGLLTLSPYHSDRFLL SPIALAGLVTVLHACLDMKSIILGKYHYMLYILTLAMQPRMLLTVDEDLKPLSVPVRVGQ AVDVVGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYLPLTPVLEGFVILRKNPEYHE D

Transcript Sequence

Transcript ID	Os06t0699900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:29423376:29431536:-1 gene:Os06g0699900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 1B description:Proteasome/cyclosome, regulatory subunit domain containing protein. (Os06t0699900-01)
Sequence	GTGTTCCAGTAGCAGCAGTCTCCAACTCCTCTTCTCTTCCCTTCCCCTCATCTCGCGCTC TCGCCTCCGCGCGGAGCTCGATTCCTAAACCCTACCTCGCCGCGCCGCCGCGCGCCGGGG AGATCGCCCTCGCCCTCCGCCATGCCGCCGCGCGAGGACCCCAACGGGGACGCCTCCTCC GCCTCCCCCTCGGACCCCGTCCCGCCTCCGCCGCAGCAGCCGCAGCCGCAGCCGGCCAAG GGCAAGGGGAAGAAGAAGGATGAGAAGAAGGACGACGACCTGTCGGAGGAGGACCAGGCG CTCAAGGAGCAGCTCGAGCTCTACGTGGTGCGGGCGCAGGACACCGATCCCGGCGTCCAG AAGCTCGCCCTCGAGAGCATGAGGCAGGAGATCCGTTCTGCGACAAGTTCAATGACCTCT GTCCCAAAGCCTCTCAAATTCCTTCGCCCGCACTATGGAACTCTCAAGGCTTACTTTGAG ACAATGCCAGAATCTGATCTGAAGAAGTATATGGCTGATATTTTGTCAGTATTGGCCCTG ACAATGTCCGCTGAAGGAGAAAGAGAGAGCCTCAACTACCGAATGATAGGCTCTGAAGGT GACATTGGTTCATGGGGTCATGAATATGTGAGAAACTTGGCTGGTGAAATTGCACAGGAA TTCCAGAAGCGCCAGGATGATGGCATGCCAACTGATTCCCTGAAGGAACTGGTGGAGCAA ATCGTTTCATTCCACATGAAGCATAATGCTGAACCTGAAGCTGTGGATCTTCTAATGGAG GTCGAAAAGCTTGATTTGCTAGTTAAGCACGTTGACTCCACGAACTACAAAAGGACCTGC TTGTACCTCACTAGTTCTTCTAAATATCTTCCTGCTCCTGATGACATGTCGGCACTTAAA ATAGCTTTTGAGATTTACATGAAATTTGGAGATTTTGCAAATGCTTTGCGTATTGCACTT CTGCTTTATGACAAGTCCCTGGAGTTGAAGCCGATTTTTACAGCAACTGATGATTTTCAA CTGAAGAAGCAATTCGCGTTTATCATAGCACGCCATGGTTTAAGCATCGAGATTGATGAT GACATAGCTGCTGATGAAAATGAGAAGGAGGCTTTGCAGGACATAATTTCTAATATTAAA TTGAGTGAGGGGTACCTTACACTTGCACGAGATATTGAGGTCATGGAGCCAAAATCTCCA GAAGACATATATAAGGTTCATTTGATTGATGGCCGAGGGGCTACAAGCTCCAGTCTTGAT TCCGCAAGACAGAATCTGGCGGCAACATTTGTCAATGCATTCGTGAATGCTGGATTTGGC CAGGATAAACTCATGACCACACCATCAGATTCTTCAAGCAGTGGTTCTTCTGGAAACTGG TTATTCAAGAACAAGGAACATGGGAAAGCTAGTGCAGCCGCTAGCCTGGGAATGATTCTT CTGTGGGATTCTGATTCAGGACTTGCCCAACTTGACAAGTACCTGCACAGCAATGATATT CATGTTGTTGCTGGGGCTTTGCTAGGGATTGGAATTGTTTCTTGTGGTGTGAAGAGTGAC TGTGATCCGGCATTTGCTCTCATTTCTGAGTATTTCAGCAGGGATGAGTCAATTATACGA ATTGGAGCAATCCTTGGTCTTGGTATTGCTTATGCTGGCTCCCAGAAAGAGGAGGTTAGA GAGAATCTCACAGCTTTTCTGACTGACTCCCAAGTACCTCTGGAGGTCTTGGTCTTCTCT GCCATCTCCTTAGGTTTGGTGTTCGTTGGTTCCTGTAATGAAGAGGTTGCACAGACAATC ATATGCGTCTTAATGGAGCGTAGTGAACCAGAGCTTGCAGAGCCAATTATGCGCTTGCTT CCTGTTGCCCTTGGCCTTCTATATCTTGGAAAGCAGGAAAGTGTGGAGGCGACTGCAGAG GTTTCTAAAACCTTTGATGAGAAGATAAGGAATTATTGTGACGTGACATTGATGTCACTG GCATATGCTGGGACAGGGAACGTGCTTAAGGTTCAGAAACTCCTTGGAATTTGCTCCGAG CATCTTGAGAAAGGTGAAACCCACCAAGGGCCAGCAGTTCTTGGAATCTCCCTAATTGCC ATGGCTGAAGAATTAGGGGCGGAAATGGCTGTACGTTCCCTTGAGCGTCTTTTACAGTAT GGCGAGCAGAATATTAGAAGGGCGGTTCCTCTAGCTCTGGGTTTGCTTTGCATATCCAAT CCAAAGGTAAATGTTATGGACACAATGAGTAGACTGAGCCATGATGCAGATGCGGAAGTT TCTATGGCTGCAATCATCTCCCTGGGCTTGATAGGGGCTGGTACAAACAATGCCCGTATA GCTGGGATGCTTCGGAACCTCTCAAGTTATTATTACAAAGAAGCAGGACATCTGTTTTGT GTGAGGATTGCTCAAGGTCTTGTTCACCTTGGGAAGGGTTTGCTGACCCTTTCACCATAT CACTCTGACCGGTTCCTTCTGTCCCCCATAGCACTTGCTGGTCTTGTGACGGTTCTGCAT GCCTGTCTTGACATGAAATCCATCATTCTGGGGAAGTACCATTACATGCTTTATATCCTT ACCCTAGCTATGCAGCCTAGGATGCTATTGACTGTGGATGAGGATCTCAAGCCCCTCTCT GTTCCGGTACGTGTTGGCCAAGCAGTTGATGTCGTCGGTCAGGCAGGTAGACCCAAGACA ATCACTGGATTCCAGACACATTCAACGCCTGTATTACTTGCTGCAGGGGAGCGAGCAGAG CTGGCAACTGAAAAATATCTTCCACTGACACCAGTTCTTGAGGGTTTTGTGATCCTAAGG AAGAACCCAGAATACCATGAAGATTAAGGCCTGGAGTACTATGAAGAGGCTTGGATCAAT ATCTAATTGTCACACAAAGCGACGAACAAATAGCACGATGAAGACGATGCATACTAGATA CGGTGAGGGCTGGGTTAACAGGAGTTCAGGTATAATGGGGCCAATATGACAGGAGAACTT TATAAGAACTAGGAATAGAATCGTTGGGTGTAATGGCATGGCCGAAAATGTTTTTGACTC GTTATACCAGAATGAAAATGACCCGAGAGTTTGTTGCC