Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0699600-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:29407744:29411786:1 gene:Os06g0699600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCT domain-containing gene 25, CCT (CO, CO-LIKE and TOC1) domain protein 25, CCT domain protein 25, CCT MOTIF FAMILY (CMF) gene 7 description:CCT domain containing protein. (Os06t0699600-01)
Sequence	ATGGCGTCGTCGTGCATCCCCACCGGCCTCCGGCTGGACCTGGAGATGGTAAAGGCGGCG GCGCCGCCCGGTGGCTCGTCGGCGGCGGCGCACTCGTCGGCGTCGTCGACGCTGTCGGAG GCGTCGAACTCGTCGTCGTCGTCGGTGGCGTCGCTGTCGCTGAAGCGGGCGCGCACGCCG CGGAAGCGGCCCAACCAGACGTACAACGAGGCGGCGGCGCTGCTCGCGTCCATGTACCCC TCCGTGTTCCCCGTCATCAAGGGCGCCGGGACGGCGCCGCCGCGGCTGCTCGGCCTCGCC ACCGCGCTCGCCGACGACCCCTCCTCCTCCGATCTCCTCCCGCCGTTCCCCGTCCTCGGG AACGGCAGCGCCGCGCACCTCCTCCGCGACACGCCGCCGCCGCCGACGCCGCGGTGCCCC GCCCCCATCAAGAGCTGTTCGTCGCCGGCGCCCGTAAGCAGCGTGTTCAGGGAGTTCCGC GACGCGGCGCCGTCGCCCGGAACGCCCGACGCCGACGCCGACGTCACCGACGACGACTAC CTCGGGGAGCTTGATTTCGAAGACGAAGACGGATTCGACGCCGACTCTTTCCTCGCCGTC GATGACGGCGTGGCCGAGGGCATCGATAGAATCATGGGCAAACTCAGCATGGAGAAGAAC TCCGCAGCCGCGTCCCGCGCCGACGCCGTCCTGTCCAGCGCCGCCATACATCCATACATT AGAAGCCTCATGGTGCTCGGTCTCGGGTTCCGGCAAGGCCGGCTCAACGCCGGCCAAGCA CTGAAGCGGCATGACGATGAGAGTGATTGGTGGATGTGCCCTGCCATACCAGTGAAGGAA ATCGCGGCGCCTCCTGCGCCATCGGTGGCTATGCCGGTGCCAGTGCCGATGCCATTGCAG GCTTCAGATAAGAAGAAGAAGAAGAGTAAGAAGAAGTCACTGAAGGAAATAGAAAGGGAT AATGCCATTGCTGTTGGTGAATGTAAGTTTGGTGATGAGGGAACTCTGGGCTTTGATCAT GGTGATGCTGGAATTTCGGCGCTGAAGGACCCAAAGATAGGATTGGGCCTGAATCTGAAC ACTGAAGAGGTGCTGAAGGCTTGGTGTAACAGTGGTTCTGTTTTCGCTGGCTGCGATGCA CTTGAATCACCAAGATCCTCCTCTGATTTGCATGCTAAACTTGCAGACATTGATCTATTT TTAGATAATAATACAAGCGGTGTTATCCGGGAAGGAAGCATGCTGAAATTGCGGCACAAG CAGAAGCAGTGCACTCCCCTCCTCTCCAATAAGACCCGGTATCAATCGCGGAAGGTGAAT GCTGAATGTCGGCCTCGGGTCAAGGGGAAGTATGTTAGCCAGGCTTCTCTTCTTCAACAA GCCTCAGAGAAAGAGAGGTAG

Peptide Sequence

PEP ID	Os06t0699600-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:29407744:29411786:1 gene:Os06g0699600 transcript:Os06t0699600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCT domain-containing gene 25, CCT (CO, CO-LIKE and TOC1) domain protein 25, CCT domain protein 25, CCT MOTIF FAMILY (CMF) gene 7 description:CCT domain containing protein. (Os06t0699600-01)
Sequence	MASSCIPTGLRLDLEMVKAAAPPGGSSAAAHSSASSTLSEASNSSSSSVASLSLKRARTP RKRPNQTYNEAAALLASMYPSVFPVIKGAGTAPPRLLGLATALADDPSSSDLLPPFPVLG NGSAAHLLRDTPPPPTPRCPAPIKSCSSPAPVSSVFREFRDAAPSPGTPDADADVTDDDY LGELDFEDEDGFDADSFLAVDDGVAEGIDRIMGKLSMEKNSAAASRADAVLSSAAIHPYI RSLMVLGLGFRQGRLNAGQALKRHDDESDWWMCPAIPVKEIAAPPAPSVAMPVPVPMPLQ ASDKKKKKSKKKSLKEIERDNAIAVGECKFGDEGTLGFDHGDAGISALKDPKIGLGLNLN TEEVLKAWCNSGSVFAGCDALESPRSSSDLHAKLADIDLFLDNNTSGVIREGSMLKLRHK QKQCTPLLSNKTRYQSRKVNAECRPRVKGKYVSQASLLQQASEKER

Transcript Sequence

Transcript ID	Os06t0699600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:29407744:29411786:1 gene:Os06g0699600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCT domain-containing gene 25, CCT (CO, CO-LIKE and TOC1) domain protein 25, CCT domain protein 25, CCT MOTIF FAMILY (CMF) gene 7 description:CCT domain containing protein. (Os06t0699600-01)
Sequence	GGACTCTAAACCCTCTCGATTCTACTCCACTCCTTAAACCTCTCCAGTTTTTGTGTAATT CTGTTGTCATACGGTTTATTGTGTGGTTGCTGAATCTTGAAAATTTAGGATCCAATGGTT AGGAGATTTTTATCGGCCCTGCTGTCTCCAGAGTTTTTTCGGTTGAGGATCCCAGTTGTA AATTTGTAACCAGTTTTTTTGCCCTGCTTTCTCCGCCGGCCGATCGATCGATTATCGACC TGTATGCCTGGTGGTGTCCGTGAGCTGCTCTTGATTTCTTCCAAGAATACAAAAAAAAAA AGGATTACAGCTTTGCCAGTGGAGTTTCCTTTTTGTGCTCCTCGTGTTTGTTCTTGGGCA GAAAGCCTGACGAAACTGAATCCTCCAACAAAAGCAAATGGCGAAGCGTGGGCTTTGTTG TTAATTATACTTTTTGAGTTTGCCCATTCCTCGAGGTTGGTAGTGGTGAACTGGTTGGTG TTGGTGTTGTTGTTGATGCTTCTTTGATGAGCGCACTGTTGCTTGCAGGGCTCCTTAATT AATCGCTTTTTCCCAAGATTTCGTTTTTAATTTATATTTATATACTCTTCTTTTTTTCTC CGGCTTCTAGGTAGAAGCAGGGGGAGACAGAGCGGCCAGTGTCTTTCTCTACAAGAAATT CCTCGGTTTCCACGCGCGCTTTGGCATTTCTTTTCTTTTGTTTTTCTTTTTTTTACCTTT CCTTTCATCTCTTCCGCTGGTTTTGTGGGATATTTGTGGGGGGTTTTGGGGGTTTAGAAT CTCTTTGATTTCTTGTGCTTTTTCTTGCTTTTTCTCGTGATGTTGGAGTGGTGTGTTTTC TGATTTGATCCGCCCAAGTAGCGATTTTCTTTTTTCTTTTCTTGTTGTTTGTTTGGAGGG GGGAAAAGGTTGCGATCTTGGTGGCGCGCCGATGGCGTCGTCGTGCATCCCCACCGGCCT CCGGCTGGACCTGGAGATGGTAAAGGCGGCGGCGCCGCCCGGTGGCTCGTCGGCGGCGGC GCACTCGTCGGCGTCGTCGACGCTGTCGGAGGCGTCGAACTCGTCGTCGTCGTCGGTGGC GTCGCTGTCGCTGAAGCGGGCGCGCACGCCGCGGAAGCGGCCCAACCAGACGTACAACGA GGCGGCGGCGCTGCTCGCGTCCATGTACCCCTCCGTGTTCCCCGTCATCAAGGGCGCCGG GACGGCGCCGCCGCGGCTGCTCGGCCTCGCCACCGCGCTCGCCGACGACCCCTCCTCCTC CGATCTCCTCCCGCCGTTCCCCGTCCTCGGGAACGGCAGCGCCGCGCACCTCCTCCGCGA CACGCCGCCGCCGCCGACGCCGCGGTGCCCCGCCCCCATCAAGAGCTGTTCGTCGCCGGC GCCCGTAAGCAGCGTGTTCAGGGAGTTCCGCGACGCGGCGCCGTCGCCCGGAACGCCCGA CGCCGACGCCGACGTCACCGACGACGACTACCTCGGGGAGCTTGATTTCGAAGACGAAGA CGGATTCGACGCCGACTCTTTCCTCGCCGTCGATGACGGCGTGGCCGAGGGCATCGATAG AATCATGGGCAAACTCAGCATGGAGAAGAACTCCGCAGCCGCGTCCCGCGCCGACGCCGT CCTGTCCAGCGCCGCCATACATCCATACATTAGAAGCCTCATGGTGCTCGGTCTCGGGTT CCGGCAAGGCCGGCTCAACGCCGGCCAAGCACTGAAGCGGCATGACGATGAGAGTGATTG GTGGATGTGCCCTGCCATACCAGTGAAGGAAATCGCGGCGCCTCCTGCGCCATCGGTGGC TATGCCGGTGCCAGTGCCGATGCCATTGCAGGCTTCAGATAAGAAGAAGAAGAAGAGTAA GAAGAAGTCACTGAAGGAAATAGAAAGGGATAATGCCATTGCTGTTGGTGAATGTAAGTT TGGTGATGAGGGAACTCTGGGCTTTGATCATGGTGATGCTGGAATTTCGGCGCTGAAGGA CCCAAAGATAGGATTGGGCCTGAATCTGAACACTGAAGAGGTGCTGAAGGCTTGGTGTAA CAGTGGTTCTGTTTTCGCTGGCTGCGATGCACTTGAATCACCAAGATCCTCCTCTGATTT GCATGCTAAACTTGCAGACATTGATCTATTTTTAGATAATAATACAAGCGGTGTTATCCG GGAAGGAAGCATGCTGAAATTGCGGCACAAGCAGAAGCAGTGCACTCCCCTCCTCTCCAA TAAGACCCGGTATCAATCGCGGAAGGTGAATGCTGAATGTCGGCCTCGGGTCAAGGGGAA GTATGTTAGCCAGGCTTCTCTTCTTCAACAAGCCTCAGAGAAAGAGAGGTAGAAAATGAT AAAAGTCCTCCCATGGACATTTTTGGGGCCTCACTCTCCCCCTCCTAAAGAGAAGCAAAT GTGCTTCTCTCTTTTTCATTTCTGCACTTTAATCATGTAAAGGGTAGAGATGCCTGTAGA GTGGCATGTTGCTATGGGGATCAGATAATCTTTGTCCAGTTCTCCAGCTATAAAAATGAT GAGGTTATCACCCCCAGTTAATGGAGTAGTAGTATTTTCTGTTCTGTTCTTTCATCTTAA TCCTCTGAAAGGCAAAAGAAGAGAAAAAAACCAAACAGGGAGAAATGATTATGAGATGAA ATTTGTTAGCCATCATGTCCATATGACGCCTGCAAAGCCGTCAGAGAATAGAAGCTGCTA AAACACCTCTGATGCTCTAAAATTGTCAAATGGAGTAAAGTTTATCCACTGCGCCTGAAT CTGGAAGGTTTCCTGTCTACGTTCAGAGATTCCCCTAATCAAGATTTCCTTATGTCTTAC TCCAATCGAAATGGCTTGTCCAAGTTGCAGGCTTTCAGCTTGGAAGGGACCAAAATGCTG TAGG