Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0698900-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:29366039:29370366:-1 gene:Os06g0698900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 20 description:Similar to GATA transcription factor 25. (Os06t0698900-01)
Sequence

ATGGCCCGCTTCGAGGAGGAGCACCGCGCCCTGGGGGCGGAGGAGGAGTATGAGGAGGAG
GAGGATGAGTTGGAGGAGGAGGAGGAGGAGATGGAGGAGGATGAGGACGCGCAACATCAT
GAGGGGGTGGGCGGCGAGGTGGCTGTCCCGATGGACGCGGAGGCCGCCGCGCAGCTGGAC
CCGCACGGCGGGATGCTCGCCGCCTCCGGCGCTGTCCAGCCCATGGCGTCCAACCAACTC
ACCCTCTCGTTCCAGGGCGAGGTCTACGTCTTCGACTCTGTCTCCCCTGACAAGGTTCAA
GCAGTGCTCTTGCTACTCGGTGGAAGGGAGCTGAACCCAGGTTTGGGCTCTGGAGCATCG
TCATCTGCGCCATACAGTAAGAGGTTGAATTTTCCACACCGGGTGGCATCTTTGATGCGG
TTCAGAGAAAAGCGGAAGGAGCGCAACTTTGATAAGAAGATCCGGTATTCTGTTCGGAAG
GAAGTTGCACTTAGGATGCAGCGCAATAGAGGTCAGTTTACATCTTCAAAACCAAAGGGT
GATGAAGCAACATCGGAATTGACAGCTTCAGATGGCTCCCCAAACTGGGGATCAGTGGAA
GGTCGGCCTCCCTCTGCTGCTGAATGCCATCACTGTGGTATAAATGCAAAGGCTACACCT
ATGATGCGTCGTGGACCTGATGGGCCAAGAACATTATGCAATGCCTGTGGCCTCATGTGG
GCAAACAAGGGGATGTTGAGGGACCTATCAAAAGCACCTCCCACACCTATTCAAGTTGTG
GCATCAGTTAATGATGGTAATGGAAGTGCTGCAGCACCTACCACCGAGCAAGAAATTCCT
GCACCAGCCACTGTCAATGGCCACGAATCATCAACGTGA

Peptide Sequence

PEP ID

Os06t0698900-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:29366039:29370366:-1 gene:Os06g0698900 transcript:Os06t0698900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 20 description:Similar to GATA transcription factor 25. (Os06t0698900-01)
Sequence

MARFEEEHRALGAEEEYEEEEDELEEEEEEMEEDEDAQHHEGVGGEVAVPMDAEAAAQLD
PHGGMLAASGAVQPMASNQLTLSFQGEVYVFDSVSPDKVQAVLLLLGGRELNPGLGSGAS
SSAPYSKRLNFPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKG
DEATSELTASDGSPNWGSVEGRPPSAAECHHCGINAKATPMMRRGPDGPRTLCNACGLMW
ANKGMLRDLSKAPPTPIQVVASVNDGNGSAAAPTTEQEIPAPATVNGHESST

Transcript Sequence

Transcript ID

Os06t0698900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:29366039:29370366:-1 gene:Os06g0698900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 20 description:Similar to GATA transcription factor 25. (Os06t0698900-01)
Sequence

GATGCGGCGGCGCACGTCGCGCCCACGGTCGACCACCTCGCCGCGGTGGCCGCCGAGGCC
GAGGCGATGGCCCGCTTCGAGGAGGAGCACCGCGCCCTGGGGGCGGAGGAGGAGTATGAG
GAGGAGGAGGATGAGTTGGAGGAGGAGGAGGAGGAGATGGAGGAGGATGAGGACGCGCAA
CATCATGAGGGGGTGGGCGGCGAGGTGGCTGTCCCGATGGACGCGGAGGCCGCCGCGCAG
CTGGACCCGCACGGCGGGATGCTCGCCGCCTCCGGCGCTGTCCAGCCCATGGCGTCCAAC
CAACTCACCCTCTCGTTCCAGGGCGAGGTCTACGTCTTCGACTCTGTCTCCCCTGACAAG
GTTCAAGCAGTGCTCTTGCTACTCGGTGGAAGGGAGCTGAACCCAGGTTTGGGCTCTGGA
GCATCGTCATCTGCGCCATACAGTAAGAGGTTGAATTTTCCACACCGGGTGGCATCTTTG
ATGCGGTTCAGAGAAAAGCGGAAGGAGCGCAACTTTGATAAGAAGATCCGGTATTCTGTT
CGGAAGGAAGTTGCACTTAGGATGCAGCGCAATAGAGGTCAGTTTACATCTTCAAAACCA
AAGGGTGATGAAGCAACATCGGAATTGACAGCTTCAGATGGCTCCCCAAACTGGGGATCA
GTGGAAGGTCGGCCTCCCTCTGCTGCTGAATGCCATCACTGTGGTATAAATGCAAAGGCT
ACACCTATGATGCGTCGTGGACCTGATGGGCCAAGAACATTATGCAATGCCTGTGGCCTC
ATGTGGGCAAACAAGGGGATGTTGAGGGACCTATCAAAAGCACCTCCCACACCTATTCAA
GTTGTGGCATCAGTTAATGATGGTAATGGAAGTGCTGCAGCACCTACCACCGAGCAAGAA
ATTCCTGCACCAGCCACTGTCAATGGCCACGAATCATCAACGTGAGTATAGCGATGTTTG
TCTTGTGGAGGATCGCGAACATCATGCCGGCATTATATCCATGTAGTTTAACTGTCTGTA
CTATAACTTGATGAGAACCTGTTAGGTACCTAGGCCATTTCTTTACCATCATTTAGGGTT
TGAATGTTGTTCTGCATATGTTGTAAGCCATGAAAAATCATGCTTCCGGTCATTATGGCC
GTAGCAATTTTATTTCTTGTTAGACTCTTGGGTGGAAGTGAGAACAGAGAAGGTGATGAA
G