Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0698674-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:29234952:29238556:-1 gene:Os06g0698674 gene_biotype:protein_coding transcript_biotype:protein_coding description:eIF4-gamma/eIF5/eIF2-epsilon domain containing protein. (Os06t0698674-01)
Sequence

ATGGCTCTGCAAAACATTGGTGCTTCAAACCGCGATGATGCTTTCTACAGGTATAAGATG
CCCAGGATGATCACCAAAATAGAAGGCCGTGGCAATGGCATCAAGACTAACATCGTGAAC
ATGGTGGATATAGCAAAAGCCCTAGCTAGGCCTGCTTCCTACACAACAAAGTACTTTGGA
TGTGAGCTTGGTGCACAGTCTAAATTTGATGAGAAGACTGGTACTTCCTTGGTTAATGGG
GCACATGATACTGCTAAACTGGCTGGTCTCCTCGAGAACTTCATCAAGAAGTATGTCCAA
TGCTATGGATGTGGCAACCCTGAGACTGAGGTCCTCATCTCCAAGGCCCAGATGATTACA
TTGAAGTGTGCTGCCTGTGGTTTCGTGTCAGACGTTGACATGAGGGACAAGCTCACAACT
TTTATCCTGAAGAATCCACCTGAACAGAAGAAGGGTGGTGGGAAAGACAAGAAGGCAATG
AGGAGAGCTGAGAAGGAGCGTCTAAAGGAAGGTGAGGCTGCTGATGAGGAGATGAAGAAG
CTAAAGAAGGAAGCAAAGAAGAAAGGTGCATCCAAGGAAAGCACCTCCTCTAAAAGTGGT
GCTGGGAAGAAGAAGGCTGCTTCTGGCTCTGATGAGGATCATTCAAATTCACCAACTCGC
AGCCATGATGGTGACAATGTGGCTGCAGATGAGGATGACGACGATGATGTCCAGTGGCAG
ACTGACACTTCGCTGGAGGCTGCAAAACAGCGCATGCAAGAGCAACTGAGCGCTGCAACT
GCTGAGATGGTGATGCTGTCCACTGAAGAACCTGAGAAGAAGAAGAAGCACGAGGCCTCA
CACAAGGAGGGTGCCTCCAACGGAAGTGCAAAACATGTGGTTGAAGAGGCTAAAAGCAGT
CCTTATGATGATCTGGTCAAGGAGATGAAGGATAACTTGAGCAAGGGTGCTACTGCTGTT
CAGCTCAAGGGTCTGATGACTTCCTCAGCCCTGCCACCCCAGGATGCTATGAATGCTCTT
TTTGATGCACTCTTTGGCGGCCTCGGCAAAGGATTTGCCAAGGAGGTTGTGAAGAAGAAG
AAATTCCTCGCGGCTGCTGTACCTGATGAAGCCTCCCAGATGGTCCTGCTGCAAGCCCTG
GTGGCCTTCGGTGCCAAGTCTAGCCCTGAAGCTGTGAAGGAGGTGCCGATTGTTCTCAAG
GCCCTGTATGATGGGGACATCCTGGATGAAGAAGTGATAACTCAGTGGTACAATGAATCT
GTTGCTGCTGGCAAGGAGTCCCAGGTGGTGAAGAATGCCAAACCATTCGTGGAGTGGCTC
CAGAGCGCGGATTCTGAATCCGAGGAAGAGTGA

Peptide Sequence

PEP ID

Os06t0698674-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:29234952:29238556:-1 gene:Os06g0698674 transcript:Os06t0698674-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:eIF4-gamma/eIF5/eIF2-epsilon domain containing protein. (Os06t0698674-01)
Sequence

MALQNIGASNRDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFG
CELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEVLISKAQMIT
LKCAACGFVSDVDMRDKLTTFILKNPPEQKKGGGKDKKAMRRAEKERLKEGEAADEEMKK
LKKEAKKKGASKESTSSKSGAGKKKAASGSDEDHSNSPTRSHDGDNVAADEDDDDDVQWQ
TDTSLEAAKQRMQEQLSAATAEMVMLSTEEPEKKKKHEASHKEGASNGSAKHVVEEAKSS
PYDDLVKEMKDNLSKGATAVQLKGLMTSSALPPQDAMNALFDALFGGLGKGFAKEVVKKK
KFLAAAVPDEASQMVLLQALVAFGAKSSPEAVKEVPIVLKALYDGDILDEEVITQWYNES
VAAGKESQVVKNAKPFVEWLQSADSESEEE

Transcript Sequence

Transcript ID

Os06t0698674-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:29234952:29238556:-1 gene:Os06g0698674 gene_biotype:protein_coding transcript_biotype:protein_coding description:eIF4-gamma/eIF5/eIF2-epsilon domain containing protein. (Os06t0698674-01)
Sequence

CCCCCTCTTCCACAATCCAGCCGCCGCAAGCAAATTTCCCCACGCTTCGCGAACCCTCGT
CGGGTCGATCCCGCCGCCGCCGCCGACGTCCCCAAATCCAATCCGCCCATCGCAAGGAGG
CAGCATCAGTTTTGCTGCAATCTGACAAAGTGGAGGGTCTAAAAGTTGAAGCTTCTTTTA
TGTCTGAACAAGACTTGCTTTACTTGGGATCAGTTGGATTACTTGGAGAATATTCTCGGA
CGAGAAAAAGGCACAAGCTCCCGCTTGGAAGGCCCTGCTGCATGCATCCGAAGCCTTGTC
AATTTATGCAAACTTCTGGCTGCTCTTGGAGTGCACTGGTTTCTGCTGATCCACTTCAAG
GATCAAGACTATTGTCACTTCTGGCTCTTGGTGCTTCTGATATTATCTCGGTGAAAGAAA
ATTAATCCAAGATGGCTCTGCAAAACATTGGTGCTTCAAACCGCGATGATGCTTTCTACA
GGTATAAGATGCCCAGGATGATCACCAAAATAGAAGGCCGTGGCAATGGCATCAAGACTA
ACATCGTGAACATGGTGGATATAGCAAAAGCCCTAGCTAGGCCTGCTTCCTACACAACAA
AGTACTTTGGATGTGAGCTTGGTGCACAGTCTAAATTTGATGAGAAGACTGGTACTTCCT
TGGTTAATGGGGCACATGATACTGCTAAACTGGCTGGTCTCCTCGAGAACTTCATCAAGA
AGTATGTCCAATGCTATGGATGTGGCAACCCTGAGACTGAGGTCCTCATCTCCAAGGCCC
AGATGATTACATTGAAGTGTGCTGCCTGTGGTTTCGTGTCAGACGTTGACATGAGGGACA
AGCTCACAACTTTTATCCTGAAGAATCCACCTGAACAGAAGAAGGGTGGTGGGAAAGACA
AGAAGGCAATGAGGAGAGCTGAGAAGGAGCGTCTAAAGGAAGGTGAGGCTGCTGATGAGG
AGATGAAGAAGCTAAAGAAGGAAGCAAAGAAGAAAGGTGCATCCAAGGAAAGCACCTCCT
CTAAAAGTGGTGCTGGGAAGAAGAAGGCTGCTTCTGGCTCTGATGAGGATCATTCAAATT
CACCAACTCGCAGCCATGATGGTGACAATGTGGCTGCAGATGAGGATGACGACGATGATG
TCCAGTGGCAGACTGACACTTCGCTGGAGGCTGCAAAACAGCGCATGCAAGAGCAACTGA
GCGCTGCAACTGCTGAGATGGTGATGCTGTCCACTGAAGAACCTGAGAAGAAGAAGAAGC
ACGAGGCCTCACACAAGGAGGGTGCCTCCAACGGAAGTGCAAAACATGTGGTTGAAGAGG
CTAAAAGCAGTCCTTATGATGATCTGGTCAAGGAGATGAAGGATAACTTGAGCAAGGGTG
CTACTGCTGTTCAGCTCAAGGGTCTGATGACTTCCTCAGCCCTGCCACCCCAGGATGCTA
TGAATGCTCTTTTTGATGCACTCTTTGGCGGCCTCGGCAAAGGATTTGCCAAGGAGGTTG
TGAAGAAGAAGAAATTCCTCGCGGCTGCTGTACCTGATGAAGCCTCCCAGATGGTCCTGC
TGCAAGCCCTGGTGGCCTTCGGTGCCAAGTCTAGCCCTGAAGCTGTGAAGGAGGTGCCGA
TTGTTCTCAAGGCCCTGTATGATGGGGACATCCTGGATGAAGAAGTGATAACTCAGTGGT
ACAATGAATCTGTTGCTGCTGGCAAGGAGTCCCAGGTGGTGAAGAATGCCAAACCATTCG
TGGAGTGGCTCCAGAGCGCGGATTCTGAATCCGAGGAAGAGTGACGCGTCCAACCTCGTC
CCCAATCATCGCCTACTTCGCCTTATCGTCTTTTGAGTATTCGTTCGCCATGAATATTTC
CAGTTCGTATCGTCGTGTGCTTTTCCTACGAGTTATGAGTGCTTCGAGTTTGTTCGTGTG
TCCTGTGCGCTTGCTTATCTGTAATGTTGGTCAATAAACCCAGACGGTCCTTACAGACTA
TGTGGTGTCACACTCCTGCTGGAGATCTTTTTATCTATCAAAACCTTAATGTGTTTTATG
TGTC