Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0697500-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:29180264:29181822:1 gene:Os06g0697500 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os06t0697500-00)
Sequence

ATGGGGGCGCCTCTGAAGCTGACCTGGGCCTCGCTCGGCTCGCTGTTCGCCACCGCCGTT
CTGGTGCGCACGGCGGCGCGCGACTTCCTCCCGCCGGAGGCGCACGGCCTGCTCCGCGCG
CTGCTGTCGCGCGCCGCCGCCGCCCTCGTGACGCCGTGCGACGCCATCATCGTCCACGAG
ACCGACGCCAACGGCGTGCCCAACGAGCTGTACGAGGCGGCGCAGCTCTACCTCGGCGCG
CGCTGCCTCGCCACGGCGCCCGCGATGCACCTCCACAAGGCGCACGGCGCGGCGGCCGCC
GTGGCGTCGCTGCCGGGCTCCCACGCCACGCGCGACGCCTTCCGCGGCGTCCGCGTGCTG
TGGACGTCGCAGCTCGACGGGAACGCGAGCTCGTCGTTCGGGGGAAGCTTCTCCTCCTCC
TCCTCCCGCCGGTGGGCGCCGCCCCCGATCGACGGCTGGCAACGGTGCCTGCGGCTCGAG
TTCCGGCGACGCGACCGCGACGTCGTGCGCGACGCGTACATCCCCTTCGTTCTCGAGGAG
GCGGCGGCGCTGCGGGCAAAGTTGCGGGAGAGGAAGCTCTACACCAACAACGGCGGTGGT
GGCGGCTGTTACTACGGCGACGGCGGCGCCATGGACGATCACCAGATGCTCTGGAAGGCG
CACAAGTTCTCGCACCCGTCCACGTTCGACTCGCTCGCCATCGACCCGGCGCTGCGCGAC
GACATCCGAGCGGACCTGCTCCGGTTCGTGCGCAGCCGCGAGCACTACGCGCGCGCCGGC
CGCGCGTGGAAGCGCGGGTACCTGCTCCATGGCCCGCCCGGCACCGGCAAGACCAGCCTC
GTCGCCGCCATCGCCAACCTCCTCGAGTTCGACATCTACGACCTGGAGCTCACCACAGTG
ACCTCCAACTACGACCTCCGGAGGCTGCTGGCCTCGACGCGGCCCAAGTCGGTCATCGTC
GTCGAGGACGTCGACTGCTCCCTCGGACTGTTCGACCGGACGCGCGCGCCGGCGCCGCCG
TCGTCCCAAGACGACGCCGACGCCGACGCCGACGAGCAGCGCAACCGTGCGATGCTGCAA
CACGCGCTAACCCTTCTGCCGCCGGCGGTCGAGGCGGCCATGCGGCGGGAGACGATCAGC
CTCTCCGGCGTGCTCAACTTCGTCGACGGCCTCTGGTCGTCGTGCGTCGGCGAGAGGCTG
GTGGTGTTCACCACCAACCACACGGACAGGCTCGACCCGGCGCTGCTCCGGCCCGGCCGC
ATGGACCGCAAGGTCGAGCTCGGCTACTGCAAGGCCCCGGCGCTGCGTGTGCTGGCCAAG
AACTACCTCGGCGACGACGACGACGCCGACGACCACGACGAGATCATGGGTGAGGCGGGG
AGGCTGCTCGATGAGGTGCAGGTGACGCCGGCGGACGTCGCCGAGGTGTTCATGGGATGC
GACGGCGACGACGGAGCCCACGTCGCGCTGCAGAAGCTCGTGGACGAGCTCAACGCTAGG
AAAGGAAAAATGAATGGGCCTAAATGA

Peptide Sequence

PEP ID

Os06t0697500-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:29180264:29181822:1 gene:Os06g0697500 transcript:Os06t0697500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os06t0697500-00)
Sequence

MGAPLKLTWASLGSLFATAVLVRTAARDFLPPEAHGLLRALLSRAAAALVTPCDAIIVHE
TDANGVPNELYEAAQLYLGARCLATAPAMHLHKAHGAAAAVASLPGSHATRDAFRGVRVL
WTSQLDGNASSSFGGSFSSSSSRRWAPPPIDGWQRCLRLEFRRRDRDVVRDAYIPFVLEE
AAALRAKLRERKLYTNNGGGGGCYYGDGGAMDDHQMLWKAHKFSHPSTFDSLAIDPALRD
DIRADLLRFVRSREHYARAGRAWKRGYLLHGPPGTGKTSLVAAIANLLEFDIYDLELTTV
TSNYDLRRLLASTRPKSVIVVEDVDCSLGLFDRTRAPAPPSSQDDADADADEQRNRAMLQ
HALTLLPPAVEAAMRRETISLSGVLNFVDGLWSSCVGERLVVFTTNHTDRLDPALLRPGR
MDRKVELGYCKAPALRVLAKNYLGDDDDADDHDEIMGEAGRLLDEVQVTPADVAEVFMGC
DGDDGAHVALQKLVDELNARKGKMNGPK

Transcript Sequence

Transcript ID

Os06t0697500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:29180264:29181822:1 gene:Os06g0697500 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os06t0697500-00)
Sequence

CACGAAGCCATCTATCTAGCTTGCAAACACACATGGGGGCGCCTCTGAAGCTGACCTGGG
CCTCGCTCGGCTCGCTGTTCGCCACCGCCGTTCTGGTGCGCACGGCGGCGCGCGACTTCC
TCCCGCCGGAGGCGCACGGCCTGCTCCGCGCGCTGCTGTCGCGCGCCGCCGCCGCCCTCG
TGACGCCGTGCGACGCCATCATCGTCCACGAGACCGACGCCAACGGCGTGCCCAACGAGC
TGTACGAGGCGGCGCAGCTCTACCTCGGCGCGCGCTGCCTCGCCACGGCGCCCGCGATGC
ACCTCCACAAGGCGCACGGCGCGGCGGCCGCCGTGGCGTCGCTGCCGGGCTCCCACGCCA
CGCGCGACGCCTTCCGCGGCGTCCGCGTGCTGTGGACGTCGCAGCTCGACGGGAACGCGA
GCTCGTCGTTCGGGGGAAGCTTCTCCTCCTCCTCCTCCCGCCGGTGGGCGCCGCCCCCGA
TCGACGGCTGGCAACGGTGCCTGCGGCTCGAGTTCCGGCGACGCGACCGCGACGTCGTGC
GCGACGCGTACATCCCCTTCGTTCTCGAGGAGGCGGCGGCGCTGCGGGCAAAGTTGCGGG
AGAGGAAGCTCTACACCAACAACGGCGGTGGTGGCGGCTGTTACTACGGCGACGGCGGCG
CCATGGACGATCACCAGATGCTCTGGAAGGCGCACAAGTTCTCGCACCCGTCCACGTTCG
ACTCGCTCGCCATCGACCCGGCGCTGCGCGACGACATCCGAGCGGACCTGCTCCGGTTCG
TGCGCAGCCGCGAGCACTACGCGCGCGCCGGCCGCGCGTGGAAGCGCGGGTACCTGCTCC
ATGGCCCGCCCGGCACCGGCAAGACCAGCCTCGTCGCCGCCATCGCCAACCTCCTCGAGT
TCGACATCTACGACCTGGAGCTCACCACAGTGACCTCCAACTACGACCTCCGGAGGCTGC
TGGCCTCGACGCGGCCCAAGTCGGTCATCGTCGTCGAGGACGTCGACTGCTCCCTCGGAC
TGTTCGACCGGACGCGCGCGCCGGCGCCGCCGTCGTCCCAAGACGACGCCGACGCCGACG
CCGACGAGCAGCGCAACCGTGCGATGCTGCAACACGCGCTAACCCTTCTGCCGCCGGCGG
TCGAGGCGGCCATGCGGCGGGAGACGATCAGCCTCTCCGGCGTGCTCAACTTCGTCGACG
GCCTCTGGTCGTCGTGCGTCGGCGAGAGGCTGGTGGTGTTCACCACCAACCACACGGACA
GGCTCGACCCGGCGCTGCTCCGGCCCGGCCGCATGGACCGCAAGGTCGAGCTCGGCTACT
GCAAGGCCCCGGCGCTGCGTGTGCTGGCCAAGAACTACCTCGGCGACGACGACGACGCCG
ACGACCACGACGAGATCATGGGTGAGGCGGGGAGGCTGCTCGATGAGGTGCAGGTGACGC
CGGCGGACGTCGCCGAGGTGTTCATGGGATGCGACGGCGACGACGGAGCCCACGTCGCGC
TGCAGAAGCTCGTGGACGAGCTCAACGCTAGGAAAGGAAAAATGAATGGGCCTAAATGA