Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0697200-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:29163800:29166676:1 gene:Os06g0697200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 35B description:DEAD-box protein abstrakt. (Os06t0697200-00)
Sequence

ATGGCCGCCGCCGCCGCCGCCGCCGCCGCCGGCGACTCGCCCCGCCGCGGAACACCGGAC
AGCGATGAGGAGGACTACGAGGAGTACGTCCCCGTCGCCAAGCGCCGGGCCATGGAGGCC
GAACGCCTCCGCCGCGCCACTAAACCGCCGACCACGAACGCAGTTGCAGTTGCAGCCCCG
CCGCCGCCGCCGCGCTCCACCTCGTCGCCGGCGGTGGGTGAGGTTGCGGTCAAGACGAGC
CTGCTCGTGAAGGCCACGAAGCTGAAGCGCGAGGCCCCTGAGGTGACCCCGGCCGAGCGG
CTGCTCCAGCAGGAGAGGGAGATGATCGAGCACCTCTCCGACCGCAAGGCCCTCATGCCC
GTCGGCGAGATCGCGAAGGGGATCAGCTACTCCGAGCCGATCACCACGGGGTGGAGGCCG
CCGCTTCGCCTCCGCCGCATGCCGCGGTCCCGCGCGGACGCGCTGCGACGGAGCTGGCAC
ATCCTTGTCGACGGCGACGACGTGCCCCCGCCGTCCCGAAGCTTCGGCGACCTCCGTCTC
CCGGAGCCCATCCTCCGCGCGCTCCGCGGCAAGGGAATCGAGAAGCCGACCCCAATCCAG
GTGCAGGGTCTCCCCGTCGCGCTCTCCGGGCGGGACATGATCGGGATCGCGTTCACGGGG
TCCGGGAAGACGCTGGTGTTCGTGCTGCCGCTCATCATGGCGGCGCTGCAGGAGGAGATC
CTGATGCCGATCGTGCCCGGCGAGGGCCCGTTCGGGCTCATCGTCTGCCCGTCGCGGGAG
CTCGCGAGGCAGACGCACGAGGTGATCGAGATGTTCCTCGCGCCGCTCATGGAGGCCGGG
TACCCGGAGATACGGCCGCTGCTCTGCATTGGAGGCGTGGACATGAGGACGCAGATGGAG
GTGGTGAAGAAGGGCGTGCATATTGTAGTGGCGACTCCTGGGAGGCTCAAGGATTTGCTC
TCCAAGAAGAAGATGAATCTTGATAACTGCAGGTATTTAACACTAGATGAGGCGGACAGA
CTAGTCGATCTTGGATTTGAGGACGACATCAGGGAGGTGTTCGACCATTTCAAGGCACAG
AGACAGACACTCCTCTTCTCTGCCACCATGCCAGAGAAGATCCAGAATTTTGCAAAGAGT
GCGCTAGTGAAACCAATCATTGTCAATGTGGGAAGAGCTGGAGCAGCAAACCTTGATGTC
ATCCAAGAGGTTGAGTATGTCAAGGAGGAAGCAAGAATCATATACCTCCTTGAGTGTCTC
CAGAAAACCCCACCCCCTGTGCTGGTTTTCTGCGAGCACAAAGCCGATGTCGATTACATC
CAAGAATTTCTTCTTCTGAAAGGTGTCGAAGCTGTTGCAATCCATGGTGGAAAAGATGAT
GAGGAAAGAAAAGACGCGTTCAAATCATTCAAAGCCTCAGAAAAGGATGTATTGGTAGCT
ACAGATGTTGCATCCAAAGGCCTTGATATCCCTGATATCCAGCATGTGATCAACTACGAC
ATGCCTGCTGAGATAGAGAACTATGTGCATCGGATTGGAAGAACCGGCAGGCGTGGGAAA
ACCGGCGTCGCAACGACATTCATCAACAAGAACCAGACAGAGACTACGCTTCTTGACCTG
AAGCAATTGCTCATCGAATCAAAGCAAAGGTTACCACCAATTCTGGCTGATCTTGATGAT
CCACAGGAGGACGATAAGGTGGCCATTGCTCAGCAGAGTGGTGTGAAGGGCTGTGCGTTT
TGTGGTGGCCTTGGCCATCGTATCGAGGCCTGCCCCAAGCAGCAGCTCCAGAACAGTGTC
ACGCTTGCTCGAGCAAGAAGTGATTACTTCGGTGGTGGTGGCTACCGGGGGGAGATTTGA

Peptide Sequence

PEP ID

Os06t0697200-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:29163800:29166676:1 gene:Os06g0697200 transcript:Os06t0697200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 35B description:DEAD-box protein abstrakt. (Os06t0697200-00)
Sequence

MAAAAAAAAAGDSPRRGTPDSDEEDYEEYVPVAKRRAMEAERLRRATKPPTTNAVAVAAP
PPPPRSTSSPAVGEVAVKTSLLVKATKLKREAPEVTPAERLLQQEREMIEHLSDRKALMP
VGEIAKGISYSEPITTGWRPPLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRL
PEPILRALRGKGIEKPTPIQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEI
LMPIVPGEGPFGLIVCPSRELARQTHEVIEMFLAPLMEAGYPEIRPLLCIGGVDMRTQME
VVKKGVHIVVATPGRLKDLLSKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQ
RQTLLFSATMPEKIQNFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECL
QKTPPPVLVFCEHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVA
TDVASKGLDIPDIQHVINYDMPAEIENYVHRIGRTGRRGKTGVATTFINKNQTETTLLDL
KQLLIESKQRLPPILADLDDPQEDDKVAIAQQSGVKGCAFCGGLGHRIEACPKQQLQNSV
TLARARSDYFGGGGYRGEI

Transcript Sequence

Transcript ID

Os06t0697200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:29163800:29166676:1 gene:Os06g0697200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 35B description:DEAD-box protein abstrakt. (Os06t0697200-00)
Sequence

GGGCGAATCGCCTCCCTCCAACTCGTATCCCGCCATGGCCGCCGCCGCCGCCGCCGCCGC
CGCCGGCGACTCGCCCCGCCGCGGAACACCGGACAGCGATGAGGAGGACTACGAGGAGTA
CGTCCCCGTCGCCAAGCGCCGGGCCATGGAGGCCGAACGCCTCCGCCGCGCCACTAAACC
GCCGACCACGAACGCAGTTGCAGTTGCAGCCCCGCCGCCGCCGCCGCGCTCCACCTCGTC
GCCGGCGGTGGGTGAGGTTGCGGTCAAGACGAGCCTGCTCGTGAAGGCCACGAAGCTGAA
GCGCGAGGCCCCTGAGGTGACCCCGGCCGAGCGGCTGCTCCAGCAGGAGAGGGAGATGAT
CGAGCACCTCTCCGACCGCAAGGCCCTCATGCCCGTCGGCGAGATCGCGAAGGGGATCAG
CTACTCCGAGCCGATCACCACGGGGTGGAGGCCGCCGCTTCGCCTCCGCCGCATGCCGCG
GTCCCGCGCGGACGCGCTGCGACGGAGCTGGCACATCCTTGTCGACGGCGACGACGTGCC
CCCGCCGTCCCGAAGCTTCGGCGACCTCCGTCTCCCGGAGCCCATCCTCCGCGCGCTCCG
CGGCAAGGGAATCGAGAAGCCGACCCCAATCCAGGTGCAGGGTCTCCCCGTCGCGCTCTC
CGGGCGGGACATGATCGGGATCGCGTTCACGGGGTCCGGGAAGACGCTGGTGTTCGTGCT
GCCGCTCATCATGGCGGCGCTGCAGGAGGAGATCCTGATGCCGATCGTGCCCGGCGAGGG
CCCGTTCGGGCTCATCGTCTGCCCGTCGCGGGAGCTCGCGAGGCAGACGCACGAGGTGAT
CGAGATGTTCCTCGCGCCGCTCATGGAGGCCGGGTACCCGGAGATACGGCCGCTGCTCTG
CATTGGAGGCGTGGACATGAGGACGCAGATGGAGGTGGTGAAGAAGGGCGTGCATATTGT
AGTGGCGACTCCTGGGAGGCTCAAGGATTTGCTCTCCAAGAAGAAGATGAATCTTGATAA
CTGCAGGTATTTAACACTAGATGAGGCGGACAGACTAGTCGATCTTGGATTTGAGGACGA
CATCAGGGAGGTGTTCGACCATTTCAAGGCACAGAGACAGACACTCCTCTTCTCTGCCAC
CATGCCAGAGAAGATCCAGAATTTTGCAAAGAGTGCGCTAGTGAAACCAATCATTGTCAA
TGTGGGAAGAGCTGGAGCAGCAAACCTTGATGTCATCCAAGAGGTTGAGTATGTCAAGGA
GGAAGCAAGAATCATATACCTCCTTGAGTGTCTCCAGAAAACCCCACCCCCTGTGCTGGT
TTTCTGCGAGCACAAAGCCGATGTCGATTACATCCAAGAATTTCTTCTTCTGAAAGGTGT
CGAAGCTGTTGCAATCCATGGTGGAAAAGATGATGAGGAAAGAAAAGACGCGTTCAAATC
ATTCAAAGCCTCAGAAAAGGATGTATTGGTAGCTACAGATGTTGCATCCAAAGGCCTTGA
TATCCCTGATATCCAGCATGTGATCAACTACGACATGCCTGCTGAGATAGAGAACTATGT
GCATCGGATTGGAAGAACCGGCAGGCGTGGGAAAACCGGCGTCGCAACGACATTCATCAA
CAAGAACCAGACAGAGACTACGCTTCTTGACCTGAAGCAATTGCTCATCGAATCAAAGCA
AAGGTTACCACCAATTCTGGCTGATCTTGATGATCCACAGGAGGACGATAAGGTGGCCAT
TGCTCAGCAGAGTGGTGTGAAGGGCTGTGCGTTTTGTGGTGGCCTTGGCCATCGTATCGA
GGCCTGCCCCAAGCAGCAGCTCCAGAACAGTGTCACGCTTGCTCGAGCAAGAAGTGATTA
CTTCGGTGGTGGTGGCTACCGGGGGGAGATTTGATCATCAAGTATCACTAGATTTGCTCT
GCCATGTATGTAGTACAGCCATCTACAATGGACCAATGGTTCAGTTTACTGTACATATGT
GAAGT