Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0696600-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:29144888:29146522:1 gene:Os06g0696600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 12 description:Similar to Xyloglucan endo-transglycosylase homolog. (Os06t0696600-01)
Sequence

ATGGTTTCTTCTTCCAATCCCGGGAGAACGCCGCCGTTGGTGGCGGCGATTGTGTGCTCC
GTGCTGCTGCTCGCCGGCGGCGCCGCCGGCAACTTCTACCAGGACGTGGACATCACTTGG
GGCGACGGCCGCGGCAAGATCCTCGGCAACGGCCAGCTCCTGACGCTGTCGCTGGACAGG
TCGTCCGGCTCCGGCTTCCAGTCCAAGAACCAGTACCTGTACGGCCGCTTCGACATGCAG
ATCAAGCTCGTCCCCGGCAACTCCGCCGGCACCGTCGCCACCTTCTACCTGTCGTCGCAG
GGGTCGCAGCACGACGAGATCGACTTCGAGTTCCTGGGGAACGCGAGCGGCGAGCCGTAC
ACGGTGCACACCAACGTGTACAGCCAGGGGAAAGGCGGCCGCGAGCAGCAGTTCCGCATG
TGGTTCGACCCTACCAAGGACTTCCACACTTACTCCGTCCTCTGGAACCCCTCCCACATC
CTTTTCTACGTGGACGGGACGCCGATACGGGAGTACAGGAACACGGAGGCGACGACGGGG
GTGGCGTTCCCGCGGGCGCAGGCGATGCGGGTGTACGCGAGCCTGTGGGACGCGGAGGAG
TGGGCGACGCAGGGGGGGCGCGTGAGGACGGACTGGTCGCGGGCGCCGTTCACGGCGTCG
TACCGCGGGCTCGCCGCGAGCGGGTGCACGTCGCAGGACGCCACGGCGTGCGCCAACCCG
GGGAGCCCGTGGATGTACCAGCAGCAGCTGGACAGCGCGTCGCAGGACCGGCTCCGGCAG
GTGCAGAGGGACTACATGATCTACAATTACTGCGCCGACACGTACCGGTTCCCCCAGGGG
TTACCGCCGGAGTGCACTGCCAAGTAG

Peptide Sequence

PEP ID

Os06t0696600-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:29144888:29146522:1 gene:Os06g0696600 transcript:Os06t0696600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 12 description:Similar to Xyloglucan endo-transglycosylase homolog. (Os06t0696600-01)
Sequence

MVSSSNPGRTPPLVAAIVCSVLLLAGGAAGNFYQDVDITWGDGRGKILGNGQLLTLSLDR
SSGSGFQSKNQYLYGRFDMQIKLVPGNSAGTVATFYLSSQGSQHDEIDFEFLGNASGEPY
TVHTNVYSQGKGGREQQFRMWFDPTKDFHTYSVLWNPSHILFYVDGTPIREYRNTEATTG
VAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGCTSQDATACANP
GSPWMYQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK

Transcript Sequence

Transcript ID

Os06t0696600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:29144888:29146522:1 gene:Os06g0696600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 12 description:Similar to Xyloglucan endo-transglycosylase homolog. (Os06t0696600-01)
Sequence

ACCACCACTGCACGAAAACCATCTGATCGATCGATCAAAAACCGAATCCAATCCAACAGT
GTTACACACACACACGATGGTTTCTTCTTCCAATCCCGGGAGAACGCCGCCGTTGGTGGC
GGCGATTGTGTGCTCCGTGCTGCTGCTCGCCGGCGGCGCCGCCGGCAACTTCTACCAGGA
CGTGGACATCACTTGGGGCGACGGCCGCGGCAAGATCCTCGGCAACGGCCAGCTCCTGAC
GCTGTCGCTGGACAGGTCGTCCGGCTCCGGCTTCCAGTCCAAGAACCAGTACCTGTACGG
CCGCTTCGACATGCAGATCAAGCTCGTCCCCGGCAACTCCGCCGGCACCGTCGCCACCTT
CTACCTGTCGTCGCAGGGGTCGCAGCACGACGAGATCGACTTCGAGTTCCTGGGGAACGC
GAGCGGCGAGCCGTACACGGTGCACACCAACGTGTACAGCCAGGGGAAAGGCGGCCGCGA
GCAGCAGTTCCGCATGTGGTTCGACCCTACCAAGGACTTCCACACTTACTCCGTCCTCTG
GAACCCCTCCCACATCCTTTTCTACGTGGACGGGACGCCGATACGGGAGTACAGGAACAC
GGAGGCGACGACGGGGGTGGCGTTCCCGCGGGCGCAGGCGATGCGGGTGTACGCGAGCCT
GTGGGACGCGGAGGAGTGGGCGACGCAGGGGGGGCGCGTGAGGACGGACTGGTCGCGGGC
GCCGTTCACGGCGTCGTACCGCGGGCTCGCCGCGAGCGGGTGCACGTCGCAGGACGCCAC
GGCGTGCGCCAACCCGGGGAGCCCGTGGATGTACCAGCAGCAGCTGGACAGCGCGTCGCA
GGACCGGCTCCGGCAGGTGCAGAGGGACTACATGATCTACAATTACTGCGCCGACACGTA
CCGGTTCCCCCAGGGGTTACCGCCGGAGTGCACTGCCAAGTAGGAAAAAAAAAGGGGCAC
TTGAAACTATTTTATTGTAGAATTATTCTGTATCTATTGCTGTATGTGTTATTGTCGTGT
AAAAAGTAGTAGAGAGATGGGAAAAGGATACGAGGAAGATAATAAGTCGACGACGATGGA
TGTATAATAAGTTTGTTTGTC