Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0694600-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:28995903:28997357:-1 gene:Os06g0694600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0694600-00)
Sequence	ATGCCCCTCTTGCTGGCGCCGCCGCCGAGCGCCGCCCGCCCGCTGCTCGCCCCGACCGTG CCCCACCTCGCGCGCACCCTCCTCGCCGGCGCGCCGGAGACCCCGCCGCTCCTCCTCGCG ATACTCCAGGCCTCGCCGCCTCTCCTCACGCCGCTCCTCTCCCACCTCCTCCTCTCCCAC TCCCCGCCCCTCCCGGCGCTCTCCCTCTTCCGCCGCCTCCTCGCCCTCCCGGGCTTCCCC GTCCCGGAGGCCTCCCTCCCCGCCCTCCTCCGCCTCCTCGCGCGCTCCCGCCGCCACGCC GTCCTCTCGTTCCGCCTGCTCGACTCCCTCCCGCCCACGCACCCGCACCTCCTCTCCACT CCGGCGCTCGCGGTGCTCCTCTCCACCGCGCTCTCCGCGTCCGCCCCGGGCGCGTCCTTC GACGCCGCTGTCACCTGCTTCGACTCCGCCGCGCGCGTGTGGGCGCGCGCCGGGCGCGAG TTCGGGGTCGCCGAGCTCAACGCGCTGCTCCGCGCGTTCTGCGCCCGCGGCCGCGTCGCC GAGGCCCGCGCGCTGTTCCACCGGTACTGCGACGCGTACCCGCCCGACGCACGCACGTTC AACACGCTGCTGCTCGGATTCAAGGAGGCAGGGAACGCCCAGGCGCTGGACCTGTTCTAC CATGACGCCGTGCTTCGCGGCTTCGTGCCGGACGCCGTGTCGTACTGCGTGAGGATGGAC GCCTACTGCAAGAAAGGGAGATTCTTGGACGCCCTCGACCTGCTCGACGAAATGCGTAAG CGGGAGAACTGCAGGCCGACACTGCAGGTGTTCACCACGCTGATCTATGGAGCTGGGATT GTGAGGAATGCGATACGTGCGCGCCAGCTTTTCGATGAAATGGGGCAGTGGGGAGTGACC CCAGACCGTGGCGCTCACAATGCGCTCATGGGCGCATATGTTAGGGCGAGAGACTTGCAG TCTGGGATGACAGTCATGAGCGAGATGGAGCGCAAGGGGATTGGTCTGGATGACGTTAGC TACAATACAATGTTGTGTGGATTTCAGAGAATTGGGGATTTGGAGGGCATCTGGAAAGTG TATAGCAAGATGGTTGGTTCAGGGTTCATGCCGAGGACTAGGACAACAATGTTGCTTATG AAGGTCTTCTGCGAGAATGCACGACCAGATCTTGGGCTAGAGCTGTGGGATTATCTGCTG GGGAAGGGATGTGTGCCTCACCGGCATGCATTGGATGTTCTGGTCACTGGTTTATGCTGC AGAGGTGTGGTTTTGGAAGCATACAGGTGTTTTAGGGAGATGATTGAGATGGGGATGACT CCTACAGAACGAGCTTTTAGGGTTTTGGAAGGGTTTTTGAAGCGGAAGCGGGAATTCGAA AAGCTTGAGGAGATTAGGCAAATGATGAAGGCAGCCCAATTGGATGAACATCAATGTGAT GAAGAGGCTGCCTGA

Peptide Sequence

PEP ID	Os06t0694600-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:28995903:28997357:-1 gene:Os06g0694600 transcript:Os06t0694600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0694600-00)
Sequence	MPLLLAPPPSAARPLLAPTVPHLARTLLAGAPETPPLLLAILQASPPLLTPLLSHLLLSH SPPLPALSLFRRLLALPGFPVPEASLPALLRLLARSRRHAVLSFRLLDSLPPTHPHLLST PALAVLLSTALSASAPGASFDAAVTCFDSAARVWARAGREFGVAELNALLRAFCARGRVA EARALFHRYCDAYPPDARTFNTLLLGFKEAGNAQALDLFYHDAVLRGFVPDAVSYCVRMD AYCKKGRFLDALDLLDEMRKRENCRPTLQVFTTLIYGAGIVRNAIRARQLFDEMGQWGVT PDRGAHNALMGAYVRARDLQSGMTVMSEMERKGIGLDDVSYNTMLCGFQRIGDLEGIWKV YSKMVGSGFMPRTRTTMLLMKVFCENARPDLGLELWDYLLGKGCVPHRHALDVLVTGLCC RGVVLEAYRCFREMIEMGMTPTERAFRVLEGFLKRKREFEKLEEIRQMMKAAQLDEHQCD EEAA

Transcript Sequence

Transcript ID	Os06t0694600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28995903:28997357:-1 gene:Os06g0694600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0694600-00)
Sequence	ATGCCCCTCTTGCTGGCGCCGCCGCCGAGCGCCGCCCGCCCGCTGCTCGCCCCGACCGTG CCCCACCTCGCGCGCACCCTCCTCGCCGGCGCGCCGGAGACCCCGCCGCTCCTCCTCGCG ATACTCCAGGCCTCGCCGCCTCTCCTCACGCCGCTCCTCTCCCACCTCCTCCTCTCCCAC TCCCCGCCCCTCCCGGCGCTCTCCCTCTTCCGCCGCCTCCTCGCCCTCCCGGGCTTCCCC GTCCCGGAGGCCTCCCTCCCCGCCCTCCTCCGCCTCCTCGCGCGCTCCCGCCGCCACGCC GTCCTCTCGTTCCGCCTGCTCGACTCCCTCCCGCCCACGCACCCGCACCTCCTCTCCACT CCGGCGCTCGCGGTGCTCCTCTCCACCGCGCTCTCCGCGTCCGCCCCGGGCGCGTCCTTC GACGCCGCTGTCACCTGCTTCGACTCCGCCGCGCGCGTGTGGGCGCGCGCCGGGCGCGAG TTCGGGGTCGCCGAGCTCAACGCGCTGCTCCGCGCGTTCTGCGCCCGCGGCCGCGTCGCC GAGGCCCGCGCGCTGTTCCACCGGTACTGCGACGCGTACCCGCCCGACGCACGCACGTTC AACACGCTGCTGCTCGGATTCAAGGAGGCAGGGAACGCCCAGGCGCTGGACCTGTTCTAC CATGACGCCGTGCTTCGCGGCTTCGTGCCGGACGCCGTGTCGTACTGCGTGAGGATGGAC GCCTACTGCAAGAAAGGGAGATTCTTGGACGCCCTCGACCTGCTCGACGAAATGCGTAAG CGGGAGAACTGCAGGCCGACACTGCAGGTGTTCACCACGCTGATCTATGGAGCTGGGATT GTGAGGAATGCGATACGTGCGCGCCAGCTTTTCGATGAAATGGGGCAGTGGGGAGTGACC CCAGACCGTGGCGCTCACAATGCGCTCATGGGCGCATATGTTAGGGCGAGAGACTTGCAG TCTGGGATGACAGTCATGAGCGAGATGGAGCGCAAGGGGATTGGTCTGGATGACGTTAGC TACAATACAATGTTGTGTGGATTTCAGAGAATTGGGGATTTGGAGGGCATCTGGAAAGTG TATAGCAAGATGGTTGGTTCAGGGTTCATGCCGAGGACTAGGACAACAATGTTGCTTATG AAGGTCTTCTGCGAGAATGCACGACCAGATCTTGGGCTAGAGCTGTGGGATTATCTGCTG GGGAAGGGATGTGTGCCTCACCGGCATGCATTGGATGTTCTGGTCACTGGTTTATGCTGC AGAGGTGTGGTTTTGGAAGCATACAGGTGTTTTAGGGAGATGATTGAGATGGGGATGACT CCTACAGAACGAGCTTTTAGGGTTTTGGAAGGGTTTTTGAAGCGGAAGCGGGAATTCGAA AAGCTTGAGGAGATTAGGCAAATGATGAAGGCAGCCCAATTGGATGAACATCAATGTGAT GAAGAGGCTGCCTGA