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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0694400-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:28988099:28990115:-1 gene:Os06g0694400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0694400-01);Conserved hypothetical protein. (Os06t0694400-02)
Sequence

ATGAGTTGCAAGCTTTCAGGGATGGCTACTGATTTATTTGGCCTTCATAGAATCCTCTCT
TCATTGTTGGAGATAGAGGGAACAAGAACCACTAGAGAGATAAAAAGTAAAGATTCTATT
CAGAAACTAGCCAAAGTATTGCTGAAAGCTAATTGGCAAAAGGATTTACACCACATCTTG
GTAGAGCCAATGGAGAAATCCAAACAAGACAGCAGGGAATCAGTTCGGAGAACAATCATG
GAGCATGATGAAGTCTTCAGACAGCAGGTGCATGAACTGCATCGACTATATCGTGTACAA
AAATCATTGATGGCTGAACTAGGAGGTGAGAAGCACAGGTTTCAATCAAGGACAGGAGAA
ACTCAAGAAATGATGCAAGGGCCCCTGTCAAACCTCAAGAATAGCCCCTCTACATCAGAG
ACAACCCAATCTGCTCATCTTGGTAGCACACAACACTGTGCTCCAGAGCAAGTTCCTGAG
CATTCAATTCTTCAAGAATACAAACCAGCAACATGCCTAAACTTCTTCACTGAAGAAACC
TCAAGAACACAAGAATTTAGACGAGAAGGTGGTAGATCAACTGGAGGTGAAAATTGGAGT
GCTTCTGACCCTTCCGTAGAGAATGATCTTGACCTCAAACTAACAATTGGCCCCAGTTTG
CATGCAACAAAAGCACCACACTGGCTCTTCTCAGGAAGCAGGGAAAGAAATCCTTCTGGT
CAGCATCGATGA

Peptide Sequence

PEP ID

Os06t0694400-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:28988099:28990115:-1 gene:Os06g0694400 transcript:Os06t0694400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0694400-01);Conserved hypothetical protein. (Os06t0694400-02)
Sequence

MSCKLSGMATDLFGLHRILSSLLEIEGTRTTREIKSKDSIQKLAKVLLKANWQKDLHHIL
VEPMEKSKQDSRESVRRTIMEHDEVFRQQVHELHRLYRVQKSLMAELGGEKHRFQSRTGE
TQEMMQGPLSNLKNSPSTSETTQSAHLGSTQHCAPEQVPEHSILQEYKPATCLNFFTEET
SRTQEFRREGGRSTGGENWSASDPSVENDLDLKLTIGPSLHATKAPHWLFSGSRERNPSG
QHR

Transcript Sequence

Transcript ID

Os06t0694400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:28988099:28990115:-1 gene:Os06g0694400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0694400-01);Conserved hypothetical protein. (Os06t0694400-02)
Sequence

ATAGTTAGGACCTTCACTGCTGACAAGTGAAATGAGTCATGGGTGCTGAGGAGAGATTTG
TGAAAGCTTCGTCCCATACTGTGCCCTTGCAAATATATGGAGGTTCCAAGTGTTCATGAC
CTGTAACCGAAGGGGAGGGAAAATGCAAGGCAAGCAGCTGGAACATGAGTTGCAAGCTTT
CAGGGATGGCTACTGATTTATTTGGCCTTCATAGAATCCTCTCTTCATTGTTGGAGATAG
AGGGAACAAGAACCACTAGAGAGATAAAAAGTAAAGATTCTATTCAGAAACTAGCCAAAG
TATTGCTGAAAGCTAATTGGCAAAAGGATTTACACCACATCTTGGTAGAGCCAATGGAGA
AATCCAAACAAGACAGCAGGGAATCAGTTCGGAGAACAATCATGGAGCATGATGAAGTCT
TCAGACAGCAGGTGCATGAACTGCATCGACTATATCGTGTACAAAAATCATTGATGGCTG
AACTAGGAGGTGAGAAGCACAGGTTTCAATCAAGGACAGGAGAAACTCAAGAAATGATGC
AAGGGCCCCTGTCAAACCTCAAGAATAGCCCCTCTACATCAGAGACAACCCAATCTGCTC
ATCTTGGTAGCACACAACACTGTGCTCCAGAGCAAGTTCCTGAGCATTCAATTCTTCAAG
AATACAAACCAGCAACATGCCTAAACTTCTTCACTGAAGAAACCTCAAGAACACAAGAAT
TTAGACGAGAAGGTGGTAGATCAACTGGAGGTGAAAATTGGAGTGCTTCTGACCCTTCCG
TAGAGAATGATCTTGACCTCAAACTAACAATTGGCCCCAGTTTGCATGCAACAAAAGCAC
CACACTGGCTCTTCTCAGGAAGCAGGGAAAGAAATCCTTCTGGTCAGCATCGATGACAAA
AAGCTGGCATTGTAGAACAGTTAGTTGGATGACAAAAAAAGAGAGGAAGCAGAAGCCTCC
TAGTCCTAGCAATGGAAGGCAACACTTCCAAGATATATCATCAATGCAACCTAGCCTCCA
AATTTTGATCAGAGTTAAGCCTCGATCATGAGTGATCTGTGTGCAAACCATAGAGTGTAG
CAGAACTAGGATTTGCTAGGAGCACATTATTGTAATGTCATGATGAGCTTTACCAACGAT
TTGGCTCTTGTTTGTCCTCTCTTCAATTCAGACAGGAAGAGAACAAACATTACTGAGGAA
GTATCAAATTTGAAAAGAGCAAAATAGTTCCTGACTTCAGTCTTCCTGATGCAGTTGTTA
TATCAGTCGTCATATCGGTCTTCCATGATTGGTTATTTCTTATTTACATTTCTTTGTCTG
CATATCCATGTACTCAGGTAATTCTTCAAAATGAATATGACTTTTTGGCGA