Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0694300-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:28985624:28987849:1 gene:Os06g0694300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0694300-00)
Sequence	ATGAGGCCATCAGGAGCCCAAGAAAGTACTGGGCCAGCACGGTTTCAGCAATGGATCCTG CGCCGGCCCAGGACGCGGTGGAGATGGGCCGTCAAGGCTCTTCTGTCTTCCTCCTTTGTC CTCCCGTTGCGTCGTGCTCCCGCAGCCTCGCGAGTCGCGACGCTTTTGCCGCCGCGGCCA CCAAAAACCGCGCGTTGCCAAAGCCAATCTACCGAACCCGTCTCCTCGCCATGGCGCCGC CGCCCCGCCGCCTCACCTCGCCGCCGTGACGCCGGCGGCATGGTGCGCCTCATCCCGCGA CTCCACGCCCCACCGCCGCCGCCGCCGCGTGTTCCAGCCGGGCTGCCGCTCCCCCTCCTC CCGGCCCCGGCGCTCGCCGCGACCCTCCTCGAGGCCGTCTCCTCCTCACCCTCCCTCCCC CACCTCCGCCACCTGCACGCGCTCGCCGTGCGCCTGCCGCTCCCGGCGACCTCCCTCCCC TTCCTCCTCTCCCGCCTCCTCCGCCGCCTCGCCGCGCTCCCACCACCACCGCACGCGCCG CTGCCGTACGCGCTCAACGTCTTCTCCGCGGTCTCTCCCCCCGACCCCTTCCTCGCGGCG GCGCTCCTGCGCTTCGCGTTCCTCACGCAGCCTCCGTTGCTCCCCTTCCGCGTCTTCTCC CACCTCCGCCGCGCTCACGGCGCGGAGCTCCCGTTCCTCCCGTTCGCTTTCTCCACGCTC GCCAAATCCGCCACGGCCTCCCGCTCTCTCCCCGCTGCCGCAGCCGCACACGCGGTGTCG GTCCTCGTCGGCGGGTTTGATAGGCACCGGTTTGTTGAGAACTCGCTGATCGGTGCTTAT GTTGCGTGTGGTGATGTGGGAGCTGCACGCAAGGTGTTTGATGAAATGGTGGAGAAGGAT GTCATTTCATGGACAAGTATTGTGGTCGCCTATACCAGAAGCGGGGATATGCGATCAGCA GAGGAGGTGTTTGGGCGGTGCCCTGTGAAGGATATGGTGGCTTGGACAGCAATGGTGACT GGCTATGCGCAGAATGCCATGCCAGTGAAGGCATTAGAAGTGTTTGATCGAATGGCAGAA CTTGGCATGGTCATTGATGAGGTTTCATTGACAGGTGCTATCTCAGCTTGCGCTCAGCTT GGTGCTTTGAGACGTGCCGCTTGGGTTCAGGAGATTGCAGAGAGGACTGGCTTTGGGAAT AACGTAGTTGTTGGGTCAGGGTTGGTGGATATGTATGCCAAGTGTGGGCTCATTGATGAG GCATCCAAGGTTTTTTATGGGATGCAGGAAAAGAATGTGTACACATATAGCTCAATGATC GCTGGTCTTGCATCGCATGGGAGGGCTAGCGAGGCGATTGCTTTATTCAAGGAGATGGTC AATAGGGCAAATGTGGAACCAAACCATGTTACCTTTATTGGGGTACTGACAGCTTGTAGC CATGCAGGGATGGTGGGAGAAGGTCGGTACTACTTTGCACAGATGAAGGACAAGTATGGG ATTATGCCATCTGCAGATCATTATGCCTGCATGGTTGATTTGCTTGGCCGGGCTGGATTG GTGGATGAAGCCCTTGATCTTGTTAGATCAATGTCCGTGACGCCTCATGGTGGTGTATGG GGAGCACTGCTTGGAGCTTGCCGGATTCATGGGAAGAGTGAAATTGCTAAGGTTGTAGCT GAACATCTTTTTAAACTCGAACCAGAGAGCATAGGAAACTATGTGTTATTATCAAATATA CTCGCGTCAGCTGGAAAATGGGAAGAAGTGTCAAAGGTTAGGATATTGATGAGAAAGCAG AGACTGAAAAAGGATCCTGCTGTTAGCTTGTTTGAAGGCAGAGATGGTTTGGTCCACCAG TTCTTTGCTGGTGATAATGCCCACCCAAGGACACATGAAATAAAGAAAGCATTGTTGGAG TTAGTGGCAAAGCTAAAACTTGAAGGTTATGTACCCATTTTGAGTTCAATTGTTTATGAT GTGAACGATGAAGAGAAGGAAAGGCTGTTGATGGGTCATAGTGAGAAGCTTGCTTTGTCG TTCGGTTTGCTTACGCTTGGATCTGGATGCACAATTAGGATCATAAAGAATCTAAGGATC TGTGATGATTGCCATTTGTTTATGCAGTTAGTATCGAGAGTTGAATCTGTTGAGATTATA GTCAGGGACAATATGAGATTCCATCATTTCAAGAATGGAGAATGCTCCTGTGGTGGATTC TGGTGA

Peptide Sequence

PEP ID	Os06t0694300-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:28985624:28987849:1 gene:Os06g0694300 transcript:Os06t0694300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0694300-00)
Sequence	MRPSGAQESTGPARFQQWILRRPRTRWRWAVKALLSSSFVLPLRRAPAASRVATLLPPRP PKTARCQSQSTEPVSSPWRRRPAASPRRRDAGGMVRLIPRLHAPPPPPPRVPAGLPLPLL PAPALAATLLEAVSSSPSLPHLRHLHALAVRLPLPATSLPFLLSRLLRRLAALPPPPHAP LPYALNVFSAVSPPDPFLAAALLRFAFLTQPPLLPFRVFSHLRRAHGAELPFLPFAFSTL AKSATASRSLPAAAAAHAVSVLVGGFDRHRFVENSLIGAYVACGDVGAARKVFDEMVEKD VISWTSIVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMAE LGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTGFGNNVVVGSGLVDMYAKCGLIDE ASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTACS HAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGVW GALLGACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNILASAGKWEEVSKVRILMRKQ RLKKDPAVSLFEGRDGLVHQFFAGDNAHPRTHEIKKALLELVAKLKLEGYVPILSSIVYD VNDEEKERLLMGHSEKLALSFGLLTLGSGCTIRIIKNLRICDDCHLFMQLVSRVESVEII VRDNMRFHHFKNGECSCGGFW

Transcript Sequence

Transcript ID	Os06t0694300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28985624:28987849:1 gene:Os06g0694300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0694300-00)
Sequence	ATGAGGCCATCAGGAGCCCAAGAAAGTACTGGGCCAGCACGGTTTCAGCAATGGATCCTG CGCCGGCCCAGGACGCGGTGGAGATGGGCCGTCAAGGCTCTTCTGTCTTCCTCCTTTGTC CTCCCGTTGCGTCGTGCTCCCGCAGCCTCGCGAGTCGCGACGCTTTTGCCGCCGCGGCCA CCAAAAACCGCGCGTTGCCAAAGCCAATCTACCGAACCCGTCTCCTCGCCATGGCGCCGC CGCCCCGCCGCCTCACCTCGCCGCCGTGACGCCGGCGGCATGGTGCGCCTCATCCCGCGA CTCCACGCCCCACCGCCGCCGCCGCCGCGTGTTCCAGCCGGGCTGCCGCTCCCCCTCCTC CCGGCCCCGGCGCTCGCCGCGACCCTCCTCGAGGCCGTCTCCTCCTCACCCTCCCTCCCC CACCTCCGCCACCTGCACGCGCTCGCCGTGCGCCTGCCGCTCCCGGCGACCTCCCTCCCC TTCCTCCTCTCCCGCCTCCTCCGCCGCCTCGCCGCGCTCCCACCACCACCGCACGCGCCG CTGCCGTACGCGCTCAACGTCTTCTCCGCGGTCTCTCCCCCCGACCCCTTCCTCGCGGCG GCGCTCCTGCGCTTCGCGTTCCTCACGCAGCCTCCGTTGCTCCCCTTCCGCGTCTTCTCC CACCTCCGCCGCGCTCACGGCGCGGAGCTCCCGTTCCTCCCGTTCGCTTTCTCCACGCTC GCCAAATCCGCCACGGCCTCCCGCTCTCTCCCCGCTGCCGCAGCCGCACACGCGGTGTCG GTCCTCGTCGGCGGGTTTGATAGGCACCGGTTTGTTGAGAACTCGCTGATCGGTGCTTAT GTTGCGTGTGGTGATGTGGGAGCTGCACGCAAGGTGTTTGATGAAATGGTGGAGAAGGAT GTCATTTCATGGACAAGTATTGTGGTCGCCTATACCAGAAGCGGGGATATGCGATCAGCA GAGGAGGTGTTTGGGCGGTGCCCTGTGAAGGATATGGTGGCTTGGACAGCAATGGTGACT GGCTATGCGCAGAATGCCATGCCAGTGAAGGCATTAGAAGTGTTTGATCGAATGGCAGAA CTTGGCATGGTCATTGATGAGGTTTCATTGACAGGTGCTATCTCAGCTTGCGCTCAGCTT GGTGCTTTGAGACGTGCCGCTTGGGTTCAGGAGATTGCAGAGAGGACTGGCTTTGGGAAT AACGTAGTTGTTGGGTCAGGGTTGGTGGATATGTATGCCAAGTGTGGGCTCATTGATGAG GCATCCAAGGTTTTTTATGGGATGCAGGAAAAGAATGTGTACACATATAGCTCAATGATC GCTGGTCTTGCATCGCATGGGAGGGCTAGCGAGGCGATTGCTTTATTCAAGGAGATGGTC AATAGGGCAAATGTGGAACCAAACCATGTTACCTTTATTGGGGTACTGACAGCTTGTAGC CATGCAGGGATGGTGGGAGAAGGTCGGTACTACTTTGCACAGATGAAGGACAAGTATGGG ATTATGCCATCTGCAGATCATTATGCCTGCATGGTTGATTTGCTTGGCCGGGCTGGATTG GTGGATGAAGCCCTTGATCTTGTTAGATCAATGTCCGTGACGCCTCATGGTGGTGTATGG GGAGCACTGCTTGGAGCTTGCCGGATTCATGGGAAGAGTGAAATTGCTAAGGTTGTAGCT GAACATCTTTTTAAACTCGAACCAGAGAGCATAGGAAACTATGTGTTATTATCAAATATA CTCGCGTCAGCTGGAAAATGGGAAGAAGTGTCAAAGGTTAGGATATTGATGAGAAAGCAG AGACTGAAAAAGGATCCTGCTGTTAGCTTGTTTGAAGGCAGAGATGGTTTGGTCCACCAG TTCTTTGCTGGTGATAATGCCCACCCAAGGACACATGAAATAAAGAAAGCATTGTTGGAG TTAGTGGCAAAGCTAAAACTTGAAGGTTATGTACCCATTTTGAGTTCAATTGTTTATGAT GTGAACGATGAAGAGAAGGAAAGGCTGTTGATGGGTCATAGTGAGAAGCTTGCTTTGTCG TTCGGTTTGCTTACGCTTGGATCTGGATGCACAATTAGGATCATAAAGAATCTAAGGATC TGTGATGATTGCCATTTGTTTATGCAGTTAGTATCGAGAGTTGAATCTGTTGAGATTATA GTCAGGGACAATATGAGATTCCATCATTTCAAGAATGGAGAATGCTCCTGTGGTGGATTC TGGTGA