Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0694200-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:28981367:28983436:-1 gene:Os06g0694200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 88 description:Esterase, SGNH hydrolase-type domain containing protein. (Os06t0694200-01)
Sequence

ATGGCTTCCTCTGCAGCTTACTTTGCTTTCTCTGTGCTTGTGGCTTTACACTTGTGTTGC
TGTCATGGACAAGCTCCTGATGCTGCTGGTAATAGCAGTGATGTAACTGCGATCTATAGC
CTTGGTGACTCCATCACTGACACCGGGAATCTGATCAAGGAGGCGCCTCCTGGCATGTTT
GAGACCATCAAGCATCTCCCGTATGGCATCACGTTTGGGTACCCGACTGGACGCTGCTCT
GATGGCCTCCTCATGATCGATTTCCTCGCTCAGGACCTGGGTCTTCCATTTCTGAACCCT
TACCTGGGCAAGAACAAGAGCTTCGACCATGGAGTAAACTTCGCCGTCGCTGGAGCCACT
GCAATGGACCCTACCGATCAGTTCAACGGGAGATTCTTCGCGCCTTTCTCTTCTAACTCC
CTTAATGTGCAGCTTAGGTGGTTCAAGGACTTCATGAAGTCCACCTTCAGCACTGAAGAA
GATATACGCAAGAGGCTCCAGTCTTCTCTGGTTTTGATTGGGGAGATTGGAGGGAACGAT
TACAACTACGCCTTGTTTGGAAAAAGTGTCAGCGAAGTGGAGAAGCTAATCCCAAGTGTC
GTTCGGACCATCATAGATGCAGCCAAGGAAGTTCTTGAAATGGGCGCGAACAGAGTCATC
ATCCCGGGCAACTTCCCCATCGGCTGCATGCCGACCTACCTGACCAGCAAGCGCTCATCC
GAGCCGTCGGACTACGACGCCACGGGCTGCCTGCGCGAGCTCAACCGCTTCGCCGCCAAG
CACAACGCGAGGCTCCGGCGCGCCATCGCCGACGAGCTCCGGCCGTCGTACCCGGCCGCG
GCCGTCGCCTACGCCGACTACTTCAACTCCTTCCTCGCCCTCCTCGACGCCGCCGGCGAG
CTCGGCTTCGACGCGGGCAGCGCGCGCAGGGCGTGCTGCGGCGCCGGCGGCGGCGAGTAC
AACTACGACCCGAGGAGGATGTGCGGCGCCGAGGGGGCGGCGGCGTGCGCGGAGCCGGAG
AAGTACGTGAGCTGGGACGGGGTACACATGACGCAGGCGGCGTACAGGGCGATGTCGAGG
CTCGTCTACCATGGGATGTACCTGGAGCCGCAGATACTGAGTCTCGCGGATGCGCCATAG

Peptide Sequence

PEP ID

Os06t0694200-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:28981367:28983436:-1 gene:Os06g0694200 transcript:Os06t0694200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 88 description:Esterase, SGNH hydrolase-type domain containing protein. (Os06t0694200-01)
Sequence

MASSAAYFAFSVLVALHLCCCHGQAPDAAGNSSDVTAIYSLGDSITDTGNLIKEAPPGMF
ETIKHLPYGITFGYPTGRCSDGLLMIDFLAQDLGLPFLNPYLGKNKSFDHGVNFAVAGAT
AMDPTDQFNGRFFAPFSSNSLNVQLRWFKDFMKSTFSTEEDIRKRLQSSLVLIGEIGGND
YNYALFGKSVSEVEKLIPSVVRTIIDAAKEVLEMGANRVIIPGNFPIGCMPTYLTSKRSS
EPSDYDATGCLRELNRFAAKHNARLRRAIADELRPSYPAAAVAYADYFNSFLALLDAAGE
LGFDAGSARRACCGAGGGEYNYDPRRMCGAEGAAACAEPEKYVSWDGVHMTQAAYRAMSR
LVYHGMYLEPQILSLADAP

Transcript Sequence

Transcript ID

Os06t0694200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:28981367:28983436:-1 gene:Os06g0694200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 88 description:Esterase, SGNH hydrolase-type domain containing protein. (Os06t0694200-01)
Sequence

AAAATGGCTCTTGCCAAGCATGAACTCGCCATCAATCGATCGACAAATCGATCTCTTTCC
AAAACATTCAGTAGTAGTTTACTGATCAACTCTGCATGGCTTCCTCTGCAGCTTACTTTG
CTTTCTCTGTGCTTGTGGCTTTACACTTGTGTTGCTGTCATGGACAAGCTCCTGATGCTG
CTGGTAATAGCAGTGATGTAACTGCGATCTATAGCCTTGGTGACTCCATCACTGACACCG
GGAATCTGATCAAGGAGGCGCCTCCTGGCATGTTTGAGACCATCAAGCATCTCCCGTATG
GCATCACGTTTGGGTACCCGACTGGACGCTGCTCTGATGGCCTCCTCATGATCGATTTCC
TCGCTCAGGACCTGGGTCTTCCATTTCTGAACCCTTACCTGGGCAAGAACAAGAGCTTCG
ACCATGGAGTAAACTTCGCCGTCGCTGGAGCCACTGCAATGGACCCTACCGATCAGTTCA
ACGGGAGATTCTTCGCGCCTTTCTCTTCTAACTCCCTTAATGTGCAGCTTAGGTGGTTCA
AGGACTTCATGAAGTCCACCTTCAGCACTGAAGAAGATATACGCAAGAGGCTCCAGTCTT
CTCTGGTTTTGATTGGGGAGATTGGAGGGAACGATTACAACTACGCCTTGTTTGGAAAAA
GTGTCAGCGAAGTGGAGAAGCTAATCCCAAGTGTCGTTCGGACCATCATAGATGCAGCCA
AGGAAGTTCTTGAAATGGGCGCGAACAGAGTCATCATCCCGGGCAACTTCCCCATCGGCT
GCATGCCGACCTACCTGACCAGCAAGCGCTCATCCGAGCCGTCGGACTACGACGCCACGG
GCTGCCTGCGCGAGCTCAACCGCTTCGCCGCCAAGCACAACGCGAGGCTCCGGCGCGCCA
TCGCCGACGAGCTCCGGCCGTCGTACCCGGCCGCGGCCGTCGCCTACGCCGACTACTTCA
ACTCCTTCCTCGCCCTCCTCGACGCCGCCGGCGAGCTCGGCTTCGACGCGGGCAGCGCGC
GCAGGGCGTGCTGCGGCGCCGGCGGCGGCGAGTACAACTACGACCCGAGGAGGATGTGCG
GCGCCGAGGGGGCGGCGGCGTGCGCGGAGCCGGAGAAGTACGTGAGCTGGGACGGGGTAC
ACATGACGCAGGCGGCGTACAGGGCGATGTCGAGGCTCGTCTACCATGGGATGTACCTGG
AGCCGCAGATACTGAGTCTCGCGGATGCGCCATAGATCTCCTGAGGCTGGAGAGTGTGTC
GTCATGCAGAAGCTGAGACGAAGATGATGGAGCTAATTTTGAGGCTTCTTCTCTCTGAGT
TCATCTGCTCAGAGAATTTTATTTGAAAAAATTATAAAAAAAGACAAGTAACGCATAAAG
TATT