Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0692800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:28910275:28914727:-1 gene:Os06g0692800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF547 domain containing protein. (Os06t0692800-01)
Sequence	ATGCGCTCCGTGACCCTGGGCGGTTCGATCCAGAGGGTGATGCGGAGGATTGGCGGCGGC GGTGGTGGCCGGAGATCGGCCGGGTCGAGGGGCGCGCCGCAGCGGGCGGAATGCCTGGGG GCGGGGAGCGGCGACGCGTCGGCGAGCTGCTCCGGGGATGATAGTAGCAATGGCACTGGC AAGAGGGATGGAAGCAGAAGGGTAAGGATGCGGCGGTACAGATCGGAGCTCGAGCAAGAA GTAAAGAAACTGCAGAGGCAACTGGAAGAAGAGATTGACTTGCAGTTGGCATTAACAGAT GCCATCACAAATAATGCTACACTGATACTTGAGCCCTCTGCAAAGCTTCCAAACAAGGCA CAGGAGCTAATAATTAGCATAGCCTCCTTGGAGAATACTGTCTCAAAACTTGAAAAAGAC CTAAATGACTTATGTTACCAACTGTGTCATTTAAGGAACAATACGCGACTTGCAGAAAAT AATTCCAGATACTTAGAAACTCTAGCTGAAGAAAATAATTCCAGAGGTCTACTGTCTACA TCATTACAGTACCAACCACCGTCAACTTGTAAATGTACAGGGGAGGAAGACATTTCAACA CTAAGAGATATAAAGCTCGGAGAATCTGAATCAATGCAAGAAAATTTATTCCCTGGGCTT GAGGACCAACAGAACATTCAAAAAGAGAGTGAAGGGAGAGAGATAGTATCTCAAGATGGG CTTCTCGAAGAGCATCAAGATGTTCCTTCAAATAGATTGTTGGAAAAACACTGGAACGAA GAGATGCAAGAGTCCTATCCTATGGAAAATGGAGGCAGAGAATATCAGATAATAGATGCG TTATCATTTGACCAATCTCATCAGAGGAAAAGCAGCATCAATGGTAATGTGTGGAATGGC AATCCAAATAAGCTCTCTGAAGAAATGGTGCGCTGTATGAGAGATATCTTCCTTCGTTTA TCTGACTCATCATCCGAGATATCACCAAAAGGGTCTTCTGTTAATTCAATTTCATCAACA GAACGTCTATCTGGCTGTACATTGACATCTGTATCAGATTCATCCTTGATGGCATCAGTG ATGCAAAGCCCTTCAGTTGATTCAAACCATGACAGTATTGATGAAGTTAGATACTTCGAT CCCTACAACGTTAATGGCAAGGAAGTTCGAAGAGACATTGGGAACTATTGTTCAGTAGCT GAGGTGTCTTGGATGTATGTTGGCAAGGAACAGCTTGCATATGCATCTGAAGCTCTAAAA AATTTCAGGAATCTCGTGGAGCAACTATCAAAGGTTGACCCTACATGTATGACCTGTGCT GAGCGGTTAGCATTTTGGATTAACCTGTACAATACGTTGATAATGCATGCATATTTGGCC TATGGGGTTCCAGAAAACGATATCAAGCTCTTCTCACTAATGCAAAAGGCCTGTTACATT GTTGGTGGGCAGTCCTTCAGCGCAGCAGAAATAGAGTTTGTGATTCTGAAGATGAAGACT CCAGTACACCGGCCACAACTTTCGTTGATGTTGGCCCTTCACAAGTTCAGAGTTACCGAG GAGCACAAGAAATATTCGATCGATGATGCAGAGCCCCTTGTGTTGTTTGGCCTTAGCTGT GGAATGTTCTCATCACCTGCTGTCAGGATTTTCTCAGCCGGGAATGTTCGGCAGGAGCTT CAGGAATCAATGAGAGACTACATCCGAGCATCGGTTGGTATCAACGACAGCGGGAAGCTC ATCGTCCCAAAGCTGCTTCAGAGCTATGCCAAGGGCACCGTGGAGGACTCTCTGCTCGCC GACTGGATCTGCCGTCACCTCACACCAAACCAGGTCGCAGCTGTCCAAGACACTTCGTCG TCGCGGAAACAGCGGCTTCTTGGTGTGCGCAGCTTCAGCGTCGTTCCATTTGACTCAAAA TTCCGGTATCTGTTCTTGCCTGACAACAGTAGCTCCCAGCACTGA

Peptide Sequence

PEP ID	Os06t0692800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:28910275:28914727:-1 gene:Os06g0692800 transcript:Os06t0692800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF547 domain containing protein. (Os06t0692800-01)
Sequence	MRSVTLGGSIQRVMRRIGGGGGGRRSAGSRGAPQRAECLGAGSGDASASCSGDDSSNGTG KRDGSRRVRMRRYRSELEQEVKKLQRQLEEEIDLQLALTDAITNNATLILEPSAKLPNKA QELIISIASLENTVSKLEKDLNDLCYQLCHLRNNTRLAENNSRYLETLAEENNSRGLLST SLQYQPPSTCKCTGEEDISTLRDIKLGESESMQENLFPGLEDQQNIQKESEGREIVSQDG LLEEHQDVPSNRLLEKHWNEEMQESYPMENGGREYQIIDALSFDQSHQRKSSINGNVWNG NPNKLSEEMVRCMRDIFLRLSDSSSEISPKGSSVNSISSTERLSGCTLTSVSDSSLMASV MQSPSVDSNHDSIDEVRYFDPYNVNGKEVRRDIGNYCSVAEVSWMYVGKEQLAYASEALK NFRNLVEQLSKVDPTCMTCAERLAFWINLYNTLIMHAYLAYGVPENDIKLFSLMQKACYI VGGQSFSAAEIEFVILKMKTPVHRPQLSLMLALHKFRVTEEHKKYSIDDAEPLVLFGLSC GMFSSPAVRIFSAGNVRQELQESMRDYIRASVGINDSGKLIVPKLLQSYAKGTVEDSLLA DWICRHLTPNQVAAVQDTSSSRKQRLLGVRSFSVVPFDSKFRYLFLPDNSSSQH

Transcript Sequence

Transcript ID	Os06t0692800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28910275:28914727:-1 gene:Os06g0692800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF547 domain containing protein. (Os06t0692800-01)
Sequence	GCGCGGAGGACGCATTGGCCGCCGCTGCAGCCGTGGCCGTGGCGTCCGACAAGATGCGCT CCGTGACCCTGGGCGGTTCGATCCAGAGGGTGATGCGGAGGATTGGCGGCGGCGGTGGTG GCCGGAGATCGGCCGGGTCGAGGGGCGCGCCGCAGCGGGCGGAATGCCTGGGGGCGGGGA GCGGCGACGCGTCGGCGAGCTGCTCCGGGGATGATAGTAGCAATGGCACTGGCAAGAGGG ATGGAAGCAGAAGGGTAAGGATGCGGCGGTACAGATCGGAGCTCGAGCAAGAAGTAAAGA AACTGCAGAGGCAACTGGAAGAAGAGATTGACTTGCAGTTGGCATTAACAGATGCCATCA CAAATAATGCTACACTGATACTTGAGCCCTCTGCAAAGCTTCCAAACAAGGCACAGGAGC TAATAATTAGCATAGCCTCCTTGGAGAATACTGTCTCAAAACTTGAAAAAGACCTAAATG ACTTATGTTACCAACTGTGTCATTTAAGGAACAATACGCGACTTGCAGAAAATAATTCCA GATACTTAGAAACTCTAGCTGAAGAAAATAATTCCAGAGGTCTACTGTCTACATCATTAC AGTACCAACCACCGTCAACTTGTAAATGTACAGGGGAGGAAGACATTTCAACACTAAGAG ATATAAAGCTCGGAGAATCTGAATCAATGCAAGAAAATTTATTCCCTGGGCTTGAGGACC AACAGAACATTCAAAAAGAGAGTGAAGGGAGAGAGATAGTATCTCAAGATGGGCTTCTCG AAGAGCATCAAGATGTTCCTTCAAATAGATTGTTGGAAAAACACTGGAACGAAGAGATGC AAGAGTCCTATCCTATGGAAAATGGAGGCAGAGAATATCAGATAATAGATGCGTTATCAT TTGACCAATCTCATCAGAGGAAAAGCAGCATCAATGGTAATGTGTGGAATGGCAATCCAA ATAAGCTCTCTGAAGAAATGGTGCGCTGTATGAGAGATATCTTCCTTCGTTTATCTGACT CATCATCCGAGATATCACCAAAAGGGTCTTCTGTTAATTCAATTTCATCAACAGAACGTC TATCTGGCTGTACATTGACATCTGTATCAGATTCATCCTTGATGGCATCAGTGATGCAAA GCCCTTCAGTTGATTCAAACCATGACAGTATTGATGAAGTTAGATACTTCGATCCCTACA ACGTTAATGGCAAGGAAGTTCGAAGAGACATTGGGAACTATTGTTCAGTAGCTGAGGTGT CTTGGATGTATGTTGGCAAGGAACAGCTTGCATATGCATCTGAAGCTCTAAAAAATTTCA GGAATCTCGTGGAGCAACTATCAAAGGTTGACCCTACATGTATGACCTGTGCTGAGCGGT TAGCATTTTGGATTAACCTGTACAATACGTTGATAATGCATGCATATTTGGCCTATGGGG TTCCAGAAAACGATATCAAGCTCTTCTCACTAATGCAAAAGGCCTGTTACATTGTTGGTG GGCAGTCCTTCAGCGCAGCAGAAATAGAGTTTGTGATTCTGAAGATGAAGACTCCAGTAC ACCGGCCACAACTTTCGTTGATGTTGGCCCTTCACAAGTTCAGAGTTACCGAGGAGCACA AGAAATATTCGATCGATGATGCAGAGCCCCTTGTGTTGTTTGGCCTTAGCTGTGGAATGT TCTCATCACCTGCTGTCAGGATTTTCTCAGCCGGGAATGTTCGGCAGGAGCTTCAGGAAT CAATGAGAGACTACATCCGAGCATCGGTTGGTATCAACGACAGCGGGAAGCTCATCGTCC CAAAGCTGCTTCAGAGCTATGCCAAGGGCACCGTGGAGGACTCTCTGCTCGCCGACTGGA TCTGCCGTCACCTCACACCAAACCAGGTCGCAGCTGTCCAAGACACTTCGTCGTCGCGGA AACAGCGGCTTCTTGGTGTGCGCAGCTTCAGCGTCGTTCCATTTGACTCAAAATTCCGGT ATCTGTTCTTGCCTGACAACAGTAGCTCCCAGCACTGAACCAAGCTTGCCCTGCCAATTG TTCAGAAAGAAACCAAGAGTAGCATTTTGACAAACTGAAAAAGAAAATGAAGAGATCAGC TGTACATGTTGTAAATCTTTTAGGGTGATTCTTTTTTTTTTTGGGCTTGTAAAGATCGTT TGTAAGCCATGCATGCTTATATAAAAACTGTAGTATAAAGGTTTGTGTATAATTTGCTTG TTTTTAGCAACAATCAAGATGGTAAAATTCAGACAGTTTTTCTTC