Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0691800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:28853373:28856934:1 gene:Os06g0691800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os06t0691800-01)
Sequence	ATGCAGCTGCCCAATTTGCCATGCAGCAGCAGCAGCAGCACCACCACCACCACCACCACC AAGTTATCTGTGGCTTTCTTTCGGCTTCTTGTTATCCTCCTGCTCTCGTTTGCCTCTCCG ACCAGCTCCTGCACAGAGCAAGAGGAGAGCTCCCTCATCGGCTTTCTAGAGGGTCTCTTG CCAGGCCACAACGGCAGCCTCAGCACGTCATGGGTGAAGGGCATAGACTGCTGCAAATGG GAAGGCATCAACTGCAGCAGCGATGGCACGGTCACAGATGTCTCGTTGGCTTCCAAGGGC CTCCAAGGGCGCATCTCGCCATCTCTCGGCAATCTTACTGGGCTGTTGCACCTCAACCTG TCTCACAACTTACTCAATGGCTACCTACCAATGGAATTGTTGTTCTCCAGAAGTATCATC GTTCTTGACGTCAGCTTCAACCGCCTGGATGGTTCTCTGCCAGAGTTGGAGTCCCCTAGT GGTGGTTCTCCTCTCCAGGTACTGAATATCTCGAGCAATTCATTTACAGGGCAGTTCTCA TCGAAACAATGGGAAGTGATGAAGAATATTGTCGCTCTTAATGTAAGCAACAACAGCTTT ACAGGACAGATACCACCTTCTATATGCATCAACTCCCCATCATTTGCTATCCTTGACCTT TGTTACAACCAATTCAGTGGCAGTATTTCCTCAGGGCTCGGAAATTGCTCCAAGATGAGA GAGTTCAAGGCTGGATACAACAACTTTAGTGGAGCTCTCCCTGAAGAACTCTTCAGTGCT ACCTCATTGGAGCACCTATCTCTTCCTAATAATGATTTACAAGGAGTTCTTGATGGTTCC CACATAGTAAAACTCGTCAAGCTGACAGTCCTTGATCTCGGATCGACTGGGCTCAGTGGC AACATCCCAGATTCTATTGGCCAACTAAGCACATTGGAGGAGCTCCGGTTGGACAACAAC AACATGTCTGGTGAGCTGCCATCAGCCCTAGGTAACTGCACAAATCTGAGATATCTCAGC CTCAGAAACAATAAATTTGTGGGAGATCTTAGCAAAGTCAATTTTACCTGGTTGAATTTG AGAATCGCAGATTTCTCAATTAATAACTTCACTGGTACAGTTCCAGAAAGCATATTCTCA TGCAGCAATCTAATTGCGTTGCGGCTGGCTTTCAACAAGTTTCATGGCCAGTTGTCACCA AGAATGGGTACTCTCAAGTCCCTGTCCTTCTTTTCAATAAGTGATAACCATTTCACAAAT ATCACAAATGCACTTCAGATACTCAGGAGCTGCAAGAACCTTACGTCACTGCTTATTGGA ACCAATTTCAAGGGTGAAACCATACCACAAGATGAAACAGTTGATGGTTTTGAGAATCTT CGGGTACTGACCATAGACTCTTGTGGAGCAATGGGGCAAATCCCTCCTTGGATATCAAAG CTCAAAAAACTGGAAGTGTTGGATTTATCAAACAATATGCTCATCGGAGAAATACCATTT TGGATTAGAGATATGCCTGTTCTTTTCTATTTAGACATAACAAACAACAGTCTTACAGGG GATATCCCAGTTGCGTTGATGAACTTGCCGATGCTACAATCAGGGAAGAATGCTGCCCAG TTGGACCCAAATTTTCTTGAATTGCCTGTTTATTGGACACCATCACGTCAATACCGCTTG CTCAATGCTTTTCCTAACGCATTGAATCTAGGTAACAATAGTTTCACAGGAGTGATTCCC CCTGAGATTGGTCAGTTGAAAATGCTTGATGGCTTCAATGTCAGCTTTAACAGGTTATCT GGAGAAATACCACAGCAGATATGCAACCTCACAAACCTGCAATTGCTAGATTTATCAAGC AATCAGCTCACAGGTGAACTACCGGCCGCACTGACTAATCTGCACTTCCTTTCTAAATTC AATGTTTCTAACAATGAACTAGAAGGGCCAGTTCCAACTGGAAGACAGTTTGATACATTT CTCAATTCTAGCTATAGTGGGAATCCAAAGCTATGTGGCCCTATGCTCAGCAACCTGTGT GATTCAGTACCAACACATGCATCCTCCATGAAACAGCGCAACAAGAAGGCCATTATTGCA CTTGCATTAGGTGTGTTCTTTGGAGGGATTGCCATCCTTTTCTTGCTGGGACGTTTTCTT ATATCCATCAGAAGAACAAGCTCTGTCCACCAAAACAAGAGCAGCAACAATGGGGACATA GAAGCAGCTTCATTGAGTTCTGTTTCAGAGCACTTGCACGACATGATAAAAGGAACCATT TTGGTGATGGTACCTCAAGGCAAGGGAGGATCAAATAATCTCAAATTCAAGGATATCTTG AAGGCCACTAATAACTTTGACCAGCAGAACATTATCGGATGTGGAGGTAATGGTCTAGTC TACAAGGCTGAGCTACCCAATGGATCCAAGCTTGCAATCAAGAAGCTCAACGGTGAAATG TGTCTGATGGAGAGAGAATTTACCGCAGAGGTAGAAGCACTCTCTATGGCACAACATGAC AATCTTGTGCCACTATGGGGTTACTGCATCCAAGGAAACTCAAGGCTCCTCATATATTCT TACATGGAGAACGGCAGTCTAGATGACTGGCTTCACAACAGAGACAATGGCAGGCCACTT CTCGACTGGCCAACAAGGCTCAAGATTGCACAAGGAGCAAGCCGGGGCCTTTCATATATC CATAATATCTGCAAGCCTCACATTGTTCACCGTGACATCAAATCCAGCAATATCCTTCTC GACAGAGAATTCAGAGCTTGTGTTGCGGATTTTGGCCTTGCCAGATTGATCCTTCCCTAT GACACACATGTTACAACTGAATTAATTGGCACTCTGGGATATATTCCACCTGAGTACAGC CAGGCATGGGTGGCTACACTAAGAGGCGATATATACAGTTTTGGAGTGGTGCTGCTTGAG CTGCTCACAGGGAAGAGGCCAGTCCAGGTCTTGTCCAAGTCGAAGGAACTTGTCCAATGG ACCCGGGAGATGAGATCTCATGGAAAGGATACTGAGGTGTTGGATCCAGCACTGAGAGGA AGAGGCCATGAAGAGCAAATGCTGAAGGTGCTTGATGTGGCTTGCAAGTGTATCAGCCAT AATCCTTGCAAGAGGCCAACCATCCAAGAAGTGGTCTCCTGCCTGGACAATGTTGATGCA GACCTGCAGGTGCAGATGTAG

Peptide Sequence

PEP ID	Os06t0691800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:28853373:28856934:1 gene:Os06g0691800 transcript:Os06t0691800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os06t0691800-01)
Sequence	MQLPNLPCSSSSSTTTTTTTKLSVAFFRLLVILLLSFASPTSSCTEQEESSLIGFLEGLL PGHNGSLSTSWVKGIDCCKWEGINCSSDGTVTDVSLASKGLQGRISPSLGNLTGLLHLNL SHNLLNGYLPMELLFSRSIIVLDVSFNRLDGSLPELESPSGGSPLQVLNISSNSFTGQFS SKQWEVMKNIVALNVSNNSFTGQIPPSICINSPSFAILDLCYNQFSGSISSGLGNCSKMR EFKAGYNNFSGALPEELFSATSLEHLSLPNNDLQGVLDGSHIVKLVKLTVLDLGSTGLSG NIPDSIGQLSTLEELRLDNNNMSGELPSALGNCTNLRYLSLRNNKFVGDLSKVNFTWLNL RIADFSINNFTGTVPESIFSCSNLIALRLAFNKFHGQLSPRMGTLKSLSFFSISDNHFTN ITNALQILRSCKNLTSLLIGTNFKGETIPQDETVDGFENLRVLTIDSCGAMGQIPPWISK LKKLEVLDLSNNMLIGEIPFWIRDMPVLFYLDITNNSLTGDIPVALMNLPMLQSGKNAAQ LDPNFLELPVYWTPSRQYRLLNAFPNALNLGNNSFTGVIPPEIGQLKMLDGFNVSFNRLS GEIPQQICNLTNLQLLDLSSNQLTGELPAALTNLHFLSKFNVSNNELEGPVPTGRQFDTF LNSSYSGNPKLCGPMLSNLCDSVPTHASSMKQRNKKAIIALALGVFFGGIAILFLLGRFL ISIRRTSSVHQNKSSNNGDIEAASLSSVSEHLHDMIKGTILVMVPQGKGGSNNLKFKDIL KATNNFDQQNIIGCGGNGLVYKAELPNGSKLAIKKLNGEMCLMEREFTAEVEALSMAQHD NLVPLWGYCIQGNSRLLIYSYMENGSLDDWLHNRDNGRPLLDWPTRLKIAQGASRGLSYI HNICKPHIVHRDIKSSNILLDREFRACVADFGLARLILPYDTHVTTELIGTLGYIPPEYS QAWVATLRGDIYSFGVVLLELLTGKRPVQVLSKSKELVQWTREMRSHGKDTEVLDPALRG RGHEEQMLKVLDVACKCISHNPCKRPTIQEVVSCLDNVDADLQVQM

Transcript Sequence

Transcript ID	Os06t0691800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28853373:28856934:1 gene:Os06g0691800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os06t0691800-01)
Sequence	TACAGAAACAGAAAGCAGCTTCTTCCTTCCCACCATAGCAGGCTATTGTTGAAAAAACCA TTTGGTTCTTTAGCCAATCAGAATCCAAATAAAACATTCTTGCAGCAGGCGAGTTTCATG AGAGAACCATGCAGCTGCCCAATTTGCCATGCAGCAGCAGCAGCAGCACCACCACCACCA CCACCACCAAGTTATCTGTGGCTTTCTTTCGGCTTCTTGTTATCCTCCTGCTCTCGTTTG CCTCTCCGACCAGCTCCTGCACAGAGCAAGAGGAGAGCTCCCTCATCGGCTTTCTAGAGG GTCTCTTGCCAGGCCACAACGGCAGCCTCAGCACGTCATGGGTGAAGGGCATAGACTGCT GCAAATGGGAAGGCATCAACTGCAGCAGCGATGGCACGGTCACAGATGTCTCGTTGGCTT CCAAGGGCCTCCAAGGGCGCATCTCGCCATCTCTCGGCAATCTTACTGGGCTGTTGCACC TCAACCTGTCTCACAACTTACTCAATGGCTACCTACCAATGGAATTGTTGTTCTCCAGAA GTATCATCGTTCTTGACGTCAGCTTCAACCGCCTGGATGGTTCTCTGCCAGAGTTGGAGT CCCCTAGTGGTGGTTCTCCTCTCCAGGTACTGAATATCTCGAGCAATTCATTTACAGGGC AGTTCTCATCGAAACAATGGGAAGTGATGAAGAATATTGTCGCTCTTAATGTAAGCAACA ACAGCTTTACAGGACAGATACCACCTTCTATATGCATCAACTCCCCATCATTTGCTATCC TTGACCTTTGTTACAACCAATTCAGTGGCAGTATTTCCTCAGGGCTCGGAAATTGCTCCA AGATGAGAGAGTTCAAGGCTGGATACAACAACTTTAGTGGAGCTCTCCCTGAAGAACTCT TCAGTGCTACCTCATTGGAGCACCTATCTCTTCCTAATAATGATTTACAAGGAGTTCTTG ATGGTTCCCACATAGTAAAACTCGTCAAGCTGACAGTCCTTGATCTCGGATCGACTGGGC TCAGTGGCAACATCCCAGATTCTATTGGCCAACTAAGCACATTGGAGGAGCTCCGGTTGG ACAACAACAACATGTCTGGTGAGCTGCCATCAGCCCTAGGTAACTGCACAAATCTGAGAT ATCTCAGCCTCAGAAACAATAAATTTGTGGGAGATCTTAGCAAAGTCAATTTTACCTGGT TGAATTTGAGAATCGCAGATTTCTCAATTAATAACTTCACTGGTACAGTTCCAGAAAGCA TATTCTCATGCAGCAATCTAATTGCGTTGCGGCTGGCTTTCAACAAGTTTCATGGCCAGT TGTCACCAAGAATGGGTACTCTCAAGTCCCTGTCCTTCTTTTCAATAAGTGATAACCATT TCACAAATATCACAAATGCACTTCAGATACTCAGGAGCTGCAAGAACCTTACGTCACTGC TTATTGGAACCAATTTCAAGGGTGAAACCATACCACAAGATGAAACAGTTGATGGTTTTG AGAATCTTCGGGTACTGACCATAGACTCTTGTGGAGCAATGGGGCAAATCCCTCCTTGGA TATCAAAGCTCAAAAAACTGGAAGTGTTGGATTTATCAAACAATATGCTCATCGGAGAAA TACCATTTTGGATTAGAGATATGCCTGTTCTTTTCTATTTAGACATAACAAACAACAGTC TTACAGGGGATATCCCAGTTGCGTTGATGAACTTGCCGATGCTACAATCAGGGAAGAATG CTGCCCAGTTGGACCCAAATTTTCTTGAATTGCCTGTTTATTGGACACCATCACGTCAAT ACCGCTTGCTCAATGCTTTTCCTAACGCATTGAATCTAGGTAACAATAGTTTCACAGGAG TGATTCCCCCTGAGATTGGTCAGTTGAAAATGCTTGATGGCTTCAATGTCAGCTTTAACA GGTTATCTGGAGAAATACCACAGCAGATATGCAACCTCACAAACCTGCAATTGCTAGATT TATCAAGCAATCAGCTCACAGGTGAACTACCGGCCGCACTGACTAATCTGCACTTCCTTT CTAAATTCAATGTTTCTAACAATGAACTAGAAGGGCCAGTTCCAACTGGAAGACAGTTTG ATACATTTCTCAATTCTAGCTATAGTGGGAATCCAAAGCTATGTGGCCCTATGCTCAGCA ACCTGTGTGATTCAGTACCAACACATGCATCCTCCATGAAACAGCGCAACAAGAAGGCCA TTATTGCACTTGCATTAGGTGTGTTCTTTGGAGGGATTGCCATCCTTTTCTTGCTGGGAC GTTTTCTTATATCCATCAGAAGAACAAGCTCTGTCCACCAAAACAAGAGCAGCAACAATG GGGACATAGAAGCAGCTTCATTGAGTTCTGTTTCAGAGCACTTGCACGACATGATAAAAG GAACCATTTTGGTGATGGTACCTCAAGGCAAGGGAGGATCAAATAATCTCAAATTCAAGG ATATCTTGAAGGCCACTAATAACTTTGACCAGCAGAACATTATCGGATGTGGAGGTAATG GTCTAGTCTACAAGGCTGAGCTACCCAATGGATCCAAGCTTGCAATCAAGAAGCTCAACG GTGAAATGTGTCTGATGGAGAGAGAATTTACCGCAGAGGTAGAAGCACTCTCTATGGCAC AACATGACAATCTTGTGCCACTATGGGGTTACTGCATCCAAGGAAACTCAAGGCTCCTCA TATATTCTTACATGGAGAACGGCAGTCTAGATGACTGGCTTCACAACAGAGACAATGGCA GGCCACTTCTCGACTGGCCAACAAGGCTCAAGATTGCACAAGGAGCAAGCCGGGGCCTTT CATATATCCATAATATCTGCAAGCCTCACATTGTTCACCGTGACATCAAATCCAGCAATA TCCTTCTCGACAGAGAATTCAGAGCTTGTGTTGCGGATTTTGGCCTTGCCAGATTGATCC TTCCCTATGACACACATGTTACAACTGAATTAATTGGCACTCTGGGATATATTCCACCTG AGTACAGCCAGGCATGGGTGGCTACACTAAGAGGCGATATATACAGTTTTGGAGTGGTGC TGCTTGAGCTGCTCACAGGGAAGAGGCCAGTCCAGGTCTTGTCCAAGTCGAAGGAACTTG TCCAATGGACCCGGGAGATGAGATCTCATGGAAAGGATACTGAGGTGTTGGATCCAGCAC TGAGAGGAAGAGGCCATGAAGAGCAAATGCTGAAGGTGCTTGATGTGGCTTGCAAGTGTA TCAGCCATAATCCTTGCAAGAGGCCAACCATCCAAGAAGTGGTCTCCTGCCTGGACAATG TTGATGCAGACCTGCAGGTGCAGATGTAGTTAAAGGAGAACAGATCCATAGACCTGGAGA TGCAGAGATGATTTTGTACTTACAGACTAGGTGTGTAACTTCAGTAGAAAGAAGATTTGC TAACAAATATTACAGTTTGATTGTACATCTGTGTAAAGGAATGGCTCGCAGTTATGAGCT TCTGTATTTAGTTTCCCTCTTTTTTGTGGAAATATTTCTCATCTAAAAAACTTAGCATTG AACTTAGGATCCCTGGTTCAAT