Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0691600-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:28847313:28848022:-1 gene:Os06g0691600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 29 description:EF-Hand type domain containing protein. (Os06t0691600-01)
Sequence	ATGGCAACGCCGGCAGGAGGACGGCCGTCGCAGCCGCAGCCGCAGGCGCAGCAGCTGTCG GTGGATTTCGAGGCGCTGAGCTACATCAGCAGCCTCGTGGAGGCGTTCCAGGCGTTCGAC TCCGACAACGACGGCCTCGTCACGGCGCCGGAGCTGAGGGGCCTCCTGGCGTCGCTCGGC CTCGACAAGCCGGAGCACGAGGTGCGCGACATGCTGGCGCGCGCCGACGCCGACCGCGAC GGGAAGCTCAGCGTGGAGGAGCTCCTGGACGTGATGAACGCCGGGCAGCTCGGCCTGGGC GCGCTCGGCGCGCTGCTGCAGTCCGCCGTGCCGGCGCTCGAGTCCGCGGCGGGGCCCGAC GGCGTCCTCGGCGCCGATGAGCTCGCCAGGCTGCTCAGCGTCATGGGCACCGCCAGCGTT GAGGACTGCATGGAGATCATCGCCTGCATGGACGGCGACGGCGATGGCGCCATCAGTGTC GAGGAGTTCAGGCTCATGGCCCAGCTGCTCTAG

Peptide Sequence

PEP ID	Os06t0691600-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:28847313:28848022:-1 gene:Os06g0691600 transcript:Os06t0691600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 29 description:EF-Hand type domain containing protein. (Os06t0691600-01)
Sequence	MATPAGGRPSQPQPQAQQLSVDFEALSYISSLVEAFQAFDSDNDGLVTAPELRGLLASLG LDKPEHEVRDMLARADADRDGKLSVEELLDVMNAGQLGLGALGALLQSAVPALESAAGPD GVLGADELARLLSVMGTASVEDCMEIIACMDGDGDGAISVEEFRLMAQLL

Transcript Sequence

Transcript ID	Os06t0691600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28847313:28848022:-1 gene:Os06g0691600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 29 description:EF-Hand type domain containing protein. (Os06t0691600-01)
Sequence	GAGCTCCGAGCAAGAAGCTCTATCTTCTCCTCTCCTTGTCAACCTAGCTAGTAGCTAGGT AAGTTACCTCGATCGTGCAGGCGATGGCAACGCCGGCAGGAGGACGGCCGTCGCAGCCGC AGCCGCAGGCGCAGCAGCTGTCGGTGGATTTCGAGGCGCTGAGCTACATCAGCAGCCTCG TGGAGGCGTTCCAGGCGTTCGACTCCGACAACGACGGCCTCGTCACGGCGCCGGAGCTGA GGGGCCTCCTGGCGTCGCTCGGCCTCGACAAGCCGGAGCACGAGGTGCGCGACATGCTGG CGCGCGCCGACGCCGACCGCGACGGGAAGCTCAGCGTGGAGGAGCTCCTGGACGTGATGA ACGCCGGGCAGCTCGGCCTGGGCGCGCTCGGCGCGCTGCTGCAGTCCGCCGTGCCGGCGC TCGAGTCCGCGGCGGGGCCCGACGGCGTCCTCGGCGCCGATGAGCTCGCCAGGCTGCTCA GCGTCATGGGCACCGCCAGCGTTGAGGACTGCATGGAGATCATCGCCTGCATGGACGGCG ACGGCGATGGCGCCATCAGTGTCGAGGAGTTCAGGCTCATGGCCCAGCTGCTCTAGCTTA CTATCCACTCCGTAGGCTCTACCAAACATACAACTTTGCAAGAAGCTACGCGTTGTTGGA GAATACTTGATGATGGTTTTAGCAATAAGAGATCGAGTTTATCAACTCTG