Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0690900-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:28801751:28804726:1 gene:Os06g0690900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0690900-00)
Sequence	ATGCGCCGCCTCCCGCCCCTGGCCCCGTCCGCCACCTCCTCCGCCGCCGCCGCTCCATCC ACCTCCACCCCGGACGTCGTCGCGGAGCTCGGCCGCATCCTCTCCACCCGTCGCTGGAAC AAGGGCCGCGCGTACAAGCGCCTCGCCCCCTCCGTCACCGCCGCGCACGTCGCCGACCTC TTCCGCGCGGACTCCACAGCCCCCGAGCCCGCCACCGCCCTCGCCTTCTTCGAGTGGCTC GCCCGCCGCGATGGGTTCCGCCACACCGCCGACTCCCACGCGGCGCTCCTCCACCTCCTG TCGCGCCGACGCGCCCCCGCGCAGTACGAGAGGCTCGTCGTGTCCATGCTCAATTGCTCC GACACCGCGGAGGACATGCGCGTCTCGGCCGACGCCATTCAGGCAATCCGTCGAACGGGT AGCGCGCGCCTTGCGCTGTCCCCGAAGTGCTACAACTTCGCCCTTCGATCGCTGGCGCGG TTCGACATGACGGAGTATATGGGGAGGGTGTACTCGCAGCTTGTTCAGGATGGTCTGTTG CCGGACACAGTGACGTACAATACCATGATTAAGTCATACTGCAAGGAAGGTGATCTCACC ACCGCGCACCGGTATTTCAGGCTGTTGCTGGAGGGTGGGTTGGAACCAGAGACGTTCACA TGTAATGCATTGGTGTTGGGTTACTGCCGAACGGGTGAATTGAGGAAGGCTTGCTGGCTA TTCCTGATGATGCCGCTGATGGGTTGCCAGAGAAATGAGTACTCCTACACCATTTTAATT CAGGGGCTCTGTGATGCTAAATGTGTAAGGAAGGCACTTGTGCTGTTCTTGATGATGAAG AGAGATGGCTGCTCTCCAAATGTGCGCGCTTTTACATTCTTGATCAGCGGACTTTGCAAG TCAGGTAGGGTTGGCGATGCCAGGTTGTTGTTTGATGCAATGCCCCAGAATGGTGTTGTT CCAAGTGTTATGACATACAATGCAATGATTGTTGGGTACTCTAAGTTAGGTAGGATGAAT GATGCATTGAAGATTAAGGAGCTGATGGAAAAAAATGGCTGCCACCCAGATGATTGGACA TACAACACTTTGATTTATGGCCTATGTGACCAAAAGACAGAAGAAGCTGAAGAATTGCTG AATAATGCTGTTAAGGAAGGTTTTACACCTACAGTTGTTACATTCACTAACTTGATCAAT GGGTATTGCATGGCTGAAAAATTTGATGATGCACTCAGGATGAAGAATAAGATGATGTCA AGCAAGTGTAAACTTGATTTACAAGTTTTTGGAAAGCTGATAAATAGCCTCATTAAGAAG GATAGGCTAAAAGAGGCTAAAGAACTGTTGAACGAAATTTCTGCAAATGGTTTAGTCCCA AATGTCATCACCTACACATCTATAATTGATGGGTATTGCAAGAGTGGGAAGGTTGATATT GCGCTAGAGGTCTTGAAGATGATGGAACGTGATGGTTGCCAGCCAAATGCCTGGACCTAC AATTCTCTGATGTATGGGTTAGTTAAGGATAAGAAACTACATAAGGCAATGGCTCTATTA ACTAAGATGCAAAAAGACGGGATAATTCCTAATGTTATCACCTACACCACTTTACTTCAA GGTCAGTGCGATGAACATGATTTCGATAATGCTTTCAGGTTATTTGAAATGATGGAGCAG AATGGTTTGAAGCCTGATGAGCATGCATATGCTGTGTTAACTGATGCACTGTGTAAAGCT GGAAGAGCTGAAGAAGCTTATTCATTTATTGTTAGAAAAGGAGTAGCTCTAACAAAGGTA TACTATACTACTTTAATTGATGGTTTCAGTAAGGCAGGCAATACTGACTTTGCTGCGACC CTTATAGAGAGGATGATTGATGAGGGTTGCACACCAGATTCATACACGTACAGTGTACTG CTGCATGCTTTATGCAAACAAAAAAGGCTGAATGAAGCTCTGCCAATACTGGATCAGATG TCTCTCAGGGGAATAAAGTGTACCATTTTTGCCTACACAATACTAATTGATGAAATGCTC AGGGAAGGAAAGCATGACCATGCTAAAAGGATGTACAATGAAATGACTTCATCAGGACAT AAGCCTAGTGCTACCACATATACTGTATTCATTAACTCATACTGCAAGGAAGGTCGACTG GAGGATGCTGAGGATTTAATCTTGAAAATGGAAAGAGAAGGTGTTGCCCCTGATGTGGTG ACCTACAACATACTCATTGATGGCTGTGGGCATATGGGGTATATAGATCGTGCATTTTCT ACTCTGAAGCGCATGGTGGGTGCATCATGTGAGCCAAATTACTGGACCTATTGTCTTTTG CTCAAGCATCTTCTAAAGGGCAATCTGGCTTATGTTCGTTCTGTAGATACTTCTGGCATG TGGAACTTGATAGAGTTGGATATTACCTGGCAACTTCTTGAAAGGATGGTGAAGCATGGA CTAAATCCCACCGTAACGACATACAGTTCTCTCATTGCAGGATTCTGCAAAGCTGGACGT CTTGAAGAAGCATGCCTTCTTCTAGATCATATGTGCGGAAAAGGTCTATCTCCCAATGAA GACATATACACATTGCTTATCAAGTGCTGTTGCGATACCAAGTTCTTTGAAAAGGCTTTG TCGTTTGTTAGCATCATGTCAGAATGTGGCTTTCAACCTCAACTCGAGTCCTACAGGCTT CTTGTGGTAGGCCTTTGTAATGAAGGAGACTTTGAGAAGGTTAAATCTCTGTTCTGTGAC TTGCTTGAACTGGGCTATAATCATGATGAGGTTGCATGGAAAATTCTAAATGATGGTTTG CTCAAAGCTGGCTATGTTGATATATGTTTCCAGATGCTGTCCATTATGGAGAAAAGATAC TGTTGCATTAGTTCTCAAACATATGCATTGGTGACAAATAAAATGCATGAAGTATCCAGT AGCCTTGTTAGTGAAGTCAGAGAAGAAGCTAGGTGA

Peptide Sequence

PEP ID	Os06t0690900-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:28801751:28804726:1 gene:Os06g0690900 transcript:Os06t0690900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0690900-00)
Sequence	MRRLPPLAPSATSSAAAAPSTSTPDVVAELGRILSTRRWNKGRAYKRLAPSVTAAHVADL FRADSTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCS DTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLL PDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWL FLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCK SGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWT YNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMS SKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKV YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL LVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRY CCISSQTYALVTNKMHEVSSSLVSEVREEAR

Transcript Sequence

Transcript ID	Os06t0690900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28801751:28804726:1 gene:Os06g0690900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0690900-00)
Sequence	ATGCGCCGCCTCCCGCCCCTGGCCCCGTCCGCCACCTCCTCCGCCGCCGCCGCTCCATCC ACCTCCACCCCGGACGTCGTCGCGGAGCTCGGCCGCATCCTCTCCACCCGTCGCTGGAAC AAGGGCCGCGCGTACAAGCGCCTCGCCCCCTCCGTCACCGCCGCGCACGTCGCCGACCTC TTCCGCGCGGACTCCACAGCCCCCGAGCCCGCCACCGCCCTCGCCTTCTTCGAGTGGCTC GCCCGCCGCGATGGGTTCCGCCACACCGCCGACTCCCACGCGGCGCTCCTCCACCTCCTG TCGCGCCGACGCGCCCCCGCGCAGTACGAGAGGCTCGTCGTGTCCATGCTCAATTGCTCC GACACCGCGGAGGACATGCGCGTCTCGGCCGACGCCATTCAGGCAATCCGTCGAACGGGT AGCGCGCGCCTTGCGCTGTCCCCGAAGTGCTACAACTTCGCCCTTCGATCGCTGGCGCGG TTCGACATGACGGAGTATATGGGGAGGGTGTACTCGCAGCTTGTTCAGGATGGTCTGTTG CCGGACACAGTGACGTACAATACCATGATTAAGTCATACTGCAAGGAAGGTGATCTCACC ACCGCGCACCGGTATTTCAGGCTGTTGCTGGAGGGTGGGTTGGAACCAGAGACGTTCACA TGTAATGCATTGGTGTTGGGTTACTGCCGAACGGGTGAATTGAGGAAGGCTTGCTGGCTA TTCCTGATGATGCCGCTGATGGGTTGCCAGAGAAATGAGTACTCCTACACCATTTTAATT CAGGGGCTCTGTGATGCTAAATGTGTAAGGAAGGCACTTGTGCTGTTCTTGATGATGAAG AGAGATGGCTGCTCTCCAAATGTGCGCGCTTTTACATTCTTGATCAGCGGACTTTGCAAG TCAGGTAGGGTTGGCGATGCCAGGTTGTTGTTTGATGCAATGCCCCAGAATGGTGTTGTT CCAAGTGTTATGACATACAATGCAATGATTGTTGGGTACTCTAAGTTAGGTAGGATGAAT GATGCATTGAAGATTAAGGAGCTGATGGAAAAAAATGGCTGCCACCCAGATGATTGGACA TACAACACTTTGATTTATGGCCTATGTGACCAAAAGACAGAAGAAGCTGAAGAATTGCTG AATAATGCTGTTAAGGAAGGTTTTACACCTACAGTTGTTACATTCACTAACTTGATCAAT GGGTATTGCATGGCTGAAAAATTTGATGATGCACTCAGGATGAAGAATAAGATGATGTCA AGCAAGTGTAAACTTGATTTACAAGTTTTTGGAAAGCTGATAAATAGCCTCATTAAGAAG GATAGGCTAAAAGAGGCTAAAGAACTGTTGAACGAAATTTCTGCAAATGGTTTAGTCCCA AATGTCATCACCTACACATCTATAATTGATGGGTATTGCAAGAGTGGGAAGGTTGATATT GCGCTAGAGGTCTTGAAGATGATGGAACGTGATGGTTGCCAGCCAAATGCCTGGACCTAC AATTCTCTGATGTATGGGTTAGTTAAGGATAAGAAACTACATAAGGCAATGGCTCTATTA ACTAAGATGCAAAAAGACGGGATAATTCCTAATGTTATCACCTACACCACTTTACTTCAA GGTCAGTGCGATGAACATGATTTCGATAATGCTTTCAGGTTATTTGAAATGATGGAGCAG AATGGTTTGAAGCCTGATGAGCATGCATATGCTGTGTTAACTGATGCACTGTGTAAAGCT GGAAGAGCTGAAGAAGCTTATTCATTTATTGTTAGAAAAGGAGTAGCTCTAACAAAGGTA TACTATACTACTTTAATTGATGGTTTCAGTAAGGCAGGCAATACTGACTTTGCTGCGACC CTTATAGAGAGGATGATTGATGAGGGTTGCACACCAGATTCATACACGTACAGTGTACTG CTGCATGCTTTATGCAAACAAAAAAGGCTGAATGAAGCTCTGCCAATACTGGATCAGATG TCTCTCAGGGGAATAAAGTGTACCATTTTTGCCTACACAATACTAATTGATGAAATGCTC AGGGAAGGAAAGCATGACCATGCTAAAAGGATGTACAATGAAATGACTTCATCAGGACAT AAGCCTAGTGCTACCACATATACTGTATTCATTAACTCATACTGCAAGGAAGGTCGACTG GAGGATGCTGAGGATTTAATCTTGAAAATGGAAAGAGAAGGTGTTGCCCCTGATGTGGTG ACCTACAACATACTCATTGATGGCTGTGGGCATATGGGGTATATAGATCGTGCATTTTCT ACTCTGAAGCGCATGGTGGGTGCATCATGTGAGCCAAATTACTGGACCTATTGTCTTTTG CTCAAGCATCTTCTAAAGGGCAATCTGGCTTATGTTCGTTCTGTAGATACTTCTGGCATG TGGAACTTGATAGAGTTGGATATTACCTGGCAACTTCTTGAAAGGATGGTGAAGCATGGA CTAAATCCCACCGTAACGACATACAGTTCTCTCATTGCAGGATTCTGCAAAGCTGGACGT CTTGAAGAAGCATGCCTTCTTCTAGATCATATGTGCGGAAAAGGTCTATCTCCCAATGAA GACATATACACATTGCTTATCAAGTGCTGTTGCGATACCAAGTTCTTTGAAAAGGCTTTG TCGTTTGTTAGCATCATGTCAGAATGTGGCTTTCAACCTCAACTCGAGTCCTACAGGCTT CTTGTGGTAGGCCTTTGTAATGAAGGAGACTTTGAGAAGGTTAAATCTCTGTTCTGTGAC TTGCTTGAACTGGGCTATAATCATGATGAGGTTGCATGGAAAATTCTAAATGATGGTTTG CTCAAAGCTGGCTATGTTGATATATGTTTCCAGATGCTGTCCATTATGGAGAAAAGATAC TGTTGCATTAGTTCTCAAACATATGCATTGGTGACAAATAAAATGCATGAAGTATCCAGT AGCCTTGTTAGTGAAGTCAGAGAAGAAGCTAGGTGA