Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0690700-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:28789036:28797545:-1 gene:Os06g0690700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAVY METAL ATPASE 1 description:Similar to Potential cadmium/zinc-transporting ATPase HMA1 (EC 3.6.3.3) (EC 3.6.3.5). (Os06t0690700-01);Similar to HMA1 (Heavy metal ATPase 1); copper-exporting ATPase. (Os06t0690700-02)
Sequence	ATGCAGCTCCTCACCGCCGCCTCCGCCTCCGCCTCCTCCGCCGCGGCGTCGCCGCCCTCC GCGCACCTCCTCCGCCTCTCGCGGCCCCCTCCCTTCCCCCACCTCCGCCGCCGCTGCGCT CCCCACCTCCCTTCCAAACCCCTCAACCTAGCCGCTAGGTCCCCTCTCCTCCTCGCGCGT CGCTCCTTGCCCTTCGCCCCCCGCGCCCACGGCGATCACCACCACGGCCACCACCACCAC CACCATGGCCACGGGCACAGTCATCATCATGGGCCGGAGGTGCACGGGAGTGGCGGGGGC GCGGCGGTCATGCGGGTGGCGAAGGCGATCGGTTGGGCGGACGTCGCCGACGCGCTGCGG GAGCACCTGCAACTCTGCTGCATCTCCCTCGGCCTCCTCCTGATTGCCGCCGCCTGCCCG CACATCCCGGTGCTCAACTCCGTCAGGCGTCTGCAGGATGCGCTAATCGCCGTAGCCTTC CCACTTGTCGGGGTTTCTGCAGCACTTGATGCTCTTGTAAATATTGCAGACGGAAAAATA AATATCCATGTCCTCATGGCCCTGGCAGCATTTGCGTCTATATTCATGGGAAACTCATTG GAGGGCGGTCTGCTTCTTGCAATGTTTAACTTAGCTCATATTGCTGAAGAACACTTTACA AGCAAGTCAATGATAGATGTGAGGGAACTGAAAGAAAATCATCCAGAATTTGCACTATTA TTAGAAACATGTGGAGACCAGTCAGCACAGTTTGCAAATTTATGTTACACCAAGGTTCCT GTGCATGACCTGGAAGTGGGTTCTCATATTTTGGTTAGAGCGGGCGAGGCTGTGCCTGTT GATGGAGAAGTTTACCAAGGTTCATCGACAGTTACTATTGAACACCTTACTGGTGAAACA AAACCTCTGGAAAGGACAGTTGGGGATGCTATACCTGGTGGTGCCAGGAACTTGGAAGGA ATGATGATTGTGAAGGTCACCAAGTCGTGGGAGGATTCAACACTCAACAGAATCGTCCAG TTGACAGAAGAAGGCCAGCTAAACAAGCCCAAATTGCAAAGATGGCTAGATGAGTTTGGA GAGCACTATAGCAGAGTTGTTGTGGTCCTGTCTTTAGTTGTCGCACTTCTGGGACCATTA CTCTTTAAGTGGCCCTTTTTTGGCAACTCAGTTTGTAGGGGCTCAATTTACCGTGGGCTA GGACTTATGGTTGCTGCATCTCCATGTGCATTGGCTGTAGCTCCATTAGCATATGCAACT GCGATCAGTTCTCTTGCAAGCAAGGGAATTTTGTTGAAAGGCGGACATGTGCTGGATGCT CTTTCTGCTTGTCAGTCTATTGCTTTTGACAAGACAGGAACATTAACAACAGGGAAGCTC ATGTGCAAAGCTATCGAACCCATTCATGGGCATTCAGATGTGACAAATGATTTTAGTGAT CAGGCTTGTTGTACTCCTAACTGTGAAAGTGAAGCTCTAGCTGTTGCTGCAGCTATGGAG AAGGGAACAACTCATCCTATTGGAAGGGCAGTTTTAGATCATTCTGTTGGGAAGGACCTC CCACTGGTTGCTGTAGAAAGCTTTGAGTGCTTACCTGGTAGAGGAGTTGTTGCTACTTTG AGCGGTGTAAAGGCTGGAAACAATGAAGATGAACTTTCTAAGGCATCAATTGGTTCTGTG GAATACATTTCTTCGCTATACAGATCCAGTGGTGAATCTGAGCAGATAAAAGAGGCTGTA AAAGCTTCTGCATTTGGGCCTGAATTTGTCCAGGCTGCTCTAACAGTGGATAAAAAGGTC ACCCTTTTTCACTTTGAGGATGAACCCCGTTCTGGTGTATGTGAAGTTATATCTACCTTA AGAGACAAGGCTAAACTTCGCATCATGATGCTTACGGGAGATCATGAATCAAGTGCTCTA AGAGTTGCTAAAGCTGTTTGTATCGACGAAGTTCACTGCTGTTTAAAGCCAGAGGACAAG TTGAATAAAGTAAAAGCAGTTTCAAGGGAGGGAGGTGGAGGTCTAATAATGGTTGGTGAT GGCATAAATGATGCACCAGCTCTTGCAGCTGCAACGGTTGGTATAGTTCTAGCCCAGCGT GCCAGTGCAACAGCGGTGGCTGTTGCAGATGTTCTTTTGTTGCAGGATAATATATGTGGG GTGCCATTTTGTATAGCTAAAGCTCGTCAAACAACTTCTTTGGTCAAGCAAAGTGTAGCT CTTGCATTGTCTTGTATTGTTTTTGCGGCACTTCCTTCTGTTTTGGGATTTCTTCCTCTT TGGTTGACGGTGCTGCTTCACGAGGGAGGAACTCTTCTCGTTTGCTTGAACTCAATACGA GCACTCAACAGTCCGACATGGTCTTGGGTAGATGATATTCGGCAACTCATTAATAGCCTA AGAAAGTACATCTCGTCAAAGTTACAGAGTACTTCGTCAAACTATGTAGTTGATGCTGTT CCGTTGTAG

Peptide Sequence

PEP ID	Os06t0690700-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:28789036:28797545:-1 gene:Os06g0690700 transcript:Os06t0690700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAVY METAL ATPASE 1 description:Similar to Potential cadmium/zinc-transporting ATPase HMA1 (EC 3.6.3.3) (EC 3.6.3.5). (Os06t0690700-01);Similar to HMA1 (Heavy metal ATPase 1); copper-exporting ATPase. (Os06t0690700-02)
Sequence	MQLLTAASASASSAAASPPSAHLLRLSRPPPFPHLRRRCAPHLPSKPLNLAARSPLLLAR RSLPFAPRAHGDHHHGHHHHHHGHGHSHHHGPEVHGSGGGAAVMRVAKAIGWADVADALR EHLQLCCISLGLLLIAAACPHIPVLNSVRRLQDALIAVAFPLVGVSAALDALVNIADGKI NIHVLMALAAFASIFMGNSLEGGLLLAMFNLAHIAEEHFTSKSMIDVRELKENHPEFALL LETCGDQSAQFANLCYTKVPVHDLEVGSHILVRAGEAVPVDGEVYQGSSTVTIEHLTGET KPLERTVGDAIPGGARNLEGMMIVKVTKSWEDSTLNRIVQLTEEGQLNKPKLQRWLDEFG EHYSRVVVVLSLVVALLGPLLFKWPFFGNSVCRGSIYRGLGLMVAASPCALAVAPLAYAT AISSLASKGILLKGGHVLDALSACQSIAFDKTGTLTTGKLMCKAIEPIHGHSDVTNDFSD QACCTPNCESEALAVAAAMEKGTTHPIGRAVLDHSVGKDLPLVAVESFECLPGRGVVATL SGVKAGNNEDELSKASIGSVEYISSLYRSSGESEQIKEAVKASAFGPEFVQAALTVDKKV TLFHFEDEPRSGVCEVISTLRDKAKLRIMMLTGDHESSALRVAKAVCIDEVHCCLKPEDK LNKVKAVSREGGGGLIMVGDGINDAPALAAATVGIVLAQRASATAVAVADVLLLQDNICG VPFCIAKARQTTSLVKQSVALALSCIVFAALPSVLGFLPLWLTVLLHEGGTLLVCLNSIR ALNSPTWSWVDDIRQLINSLRKYISSKLQSTSSNYVVDAVPL

Transcript Sequence

Transcript ID	Os06t0690700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28789036:28797545:-1 gene:Os06g0690700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAVY METAL ATPASE 1 description:Similar to Potential cadmium/zinc-transporting ATPase HMA1 (EC 3.6.3.3) (EC 3.6.3.5). (Os06t0690700-01);Similar to HMA1 (Heavy metal ATPase 1); copper-exporting ATPase. (Os06t0690700-02)
Sequence	GCTGCTAAGCTCTCACCACAGCCACCAGTCCACGGCCTCCCCCCGCCTGCCTCGCCGCCG CAGCCGCCTCCCGCCCGCCGCAGCCGACGCCACGCGCGCGATCTCCCCCCCTCCCCCCCC CCCACCTTCCACCGTTCCACGCCTCGCCGCCGACCCGTTCGGCGATGCAGCTCCTCACCG CCGCCTCCGCCTCCGCCTCCTCCGCCGCGGCGTCGCCGCCCTCCGCGCACCTCCTCCGCC TCTCGCGGCCCCCTCCCTTCCCCCACCTCCGCCGCCGCTGCGCTCCCCACCTCCCTTCCA AACCCCTCAACCTAGCCGCTAGGTCCCCTCTCCTCCTCGCGCGTCGCTCCTTGCCCTTCG CCCCCCGCGCCCACGGCGATCACCACCACGGCCACCACCACCACCACCATGGCCACGGGC ACAGTCATCATCATGGGCCGGAGGTGCACGGGAGTGGCGGGGGCGCGGCGGTCATGCGGG TGGCGAAGGCGATCGGTTGGGCGGACGTCGCCGACGCGCTGCGGGAGCACCTGCAACTCT GCTGCATCTCCCTCGGCCTCCTCCTGATTGCCGCCGCCTGCCCGCACATCCCGGTGCTCA ACTCCGTCAGGCGTCTGCAGGATGCGCTAATCGCCGTAGCCTTCCCACTTGTCGGGGTTT CTGCAGCACTTGATGCTCTTGTAAATATTGCAGACGGAAAAATAAATATCCATGTCCTCA TGGCCCTGGCAGCATTTGCGTCTATATTCATGGGAAACTCATTGGAGGGCGGTCTGCTTC TTGCAATGTTTAACTTAGCTCATATTGCTGAAGAACACTTTACAAGCAAGTCAATGATAG ATGTGAGGGAACTGAAAGAAAATCATCCAGAATTTGCACTATTATTAGAAACATGTGGAG ACCAGTCAGCACAGTTTGCAAATTTATGTTACACCAAGGTTCCTGTGCATGACCTGGAAG TGGGTTCTCATATTTTGGTTAGAGCGGGCGAGGCTGTGCCTGTTGATGGAGAAGTTTACC AAGGTTCATCGACAGTTACTATTGAACACCTTACTGGTGAAACAAAACCTCTGGAAAGGA CAGTTGGGGATGCTATACCTGGTGGTGCCAGGAACTTGGAAGGAATGATGATTGTGAAGG TCACCAAGTCGTGGGAGGATTCAACACTCAACAGAATCGTCCAGTTGACAGAAGAAGGCC AGCTAAACAAGCCCAAATTGCAAAGATGGCTAGATGAGTTTGGAGAGCACTATAGCAGAG TTGTTGTGGTCCTGTCTTTAGTTGTCGCACTTCTGGGACCATTACTCTTTAAGTGGCCCT TTTTTGGCAACTCAGTTTGTAGGGGCTCAATTTACCGTGGGCTAGGACTTATGGTTGCTG CATCTCCATGTGCATTGGCTGTAGCTCCATTAGCATATGCAACTGCGATCAGTTCTCTTG CAAGCAAGGGAATTTTGTTGAAAGGCGGACATGTGCTGGATGCTCTTTCTGCTTGTCAGT CTATTGCTTTTGACAAGACAGGAACATTAACAACAGGGAAGCTCATGTGCAAAGCTATCG AACCCATTCATGGGCATTCAGATGTGACAAATGATTTTAGTGATCAGGCTTGTTGTACTC CTAACTGTGAAAGTGAAGCTCTAGCTGTTGCTGCAGCTATGGAGAAGGGAACAACTCATC CTATTGGAAGGGCAGTTTTAGATCATTCTGTTGGGAAGGACCTCCCACTGGTTGCTGTAG AAAGCTTTGAGTGCTTACCTGGTAGAGGAGTTGTTGCTACTTTGAGCGGTGTAAAGGCTG GAAACAATGAAGATGAACTTTCTAAGGCATCAATTGGTTCTGTGGAATACATTTCTTCGC TATACAGATCCAGTGGTGAATCTGAGCAGATAAAAGAGGCTGTAAAAGCTTCTGCATTTG GGCCTGAATTTGTCCAGGCTGCTCTAACAGTGGATAAAAAGGTCACCCTTTTTCACTTTG AGGATGAACCCCGTTCTGGTGTATGTGAAGTTATATCTACCTTAAGAGACAAGGCTAAAC TTCGCATCATGATGCTTACGGGAGATCATGAATCAAGTGCTCTAAGAGTTGCTAAAGCTG TTTGTATCGACGAAGTTCACTGCTGTTTAAAGCCAGAGGACAAGTTGAATAAAGTAAAAG CAGTTTCAAGGGAGGGAGGTGGAGGTCTAATAATGGTTGGTGATGGCATAAATGATGCAC CAGCTCTTGCAGCTGCAACGGTTGGTATAGTTCTAGCCCAGCGTGCCAGTGCAACAGCGG TGGCTGTTGCAGATGTTCTTTTGTTGCAGGATAATATATGTGGGGTGCCATTTTGTATAG CTAAAGCTCGTCAAACAACTTCTTTGGTCAAGCAAAGTGTAGCTCTTGCATTGTCTTGTA TTGTTTTTGCGGCACTTCCTTCTGTTTTGGGATTTCTTCCTCTTTGGTTGACGGTGCTGC TTCACGAGGGAGGAACTCTTCTCGTTTGCTTGAACTCAATACGAGCACTCAACAGTCCGA CATGGTCTTGGGTAGATGATATTCGGCAACTCATTAATAGCCTAAGAAAGTACATCTCGT CAAAGTTACAGAGTACTTCGTCAAACTATGTAGTTGATGCTGTTCCGTTGTAGATATTAT GTACAGCAACAGTTTTCTGTCAGCTTTGTATGTATGGTACTGTTGGAATTTTGACGAGGA GTTCTAAGTTGTAACCAAATTTTTGTAGGATGTACATGTACTCGTATCACTATCGTGTAA AGAATTTTTTTTCAAGTTCT