Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0687700-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:28682065:28684964:-1 gene:Os06g0687700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-complex protein 1, eta subunit (TCP-1-eta) (CCT-eta) (HIV-1 Nef interacting protein). (Os06t0687700-01)
Sequence	AGATTGTCTGACCCTTTACAATACCAATCAATCGTCGATGCTGAATGGAATATCATTTAT GACAAGTTGGATAAATGTGTCAAAAGTGGGGCAAAGATAGTCCTTTCTCGGTTGGCAATT GGTGATCTTGCAACACAGTATTTTGCAGACCGGGACATTTTCTGTGCTGGCCGTGTTGCA GAAGAGGATTTACAACGTGTTGCAGCAGCAACAGGTGGTACCGTTCAGACATCAGTGAAT AATGTCATTGATGAGGTACTTGGTACTTGCGAAGTTTTCGAGGAAAGGCAAGTGGGCAAT GAACGGTTCAATATATTTAGTGGTTGCCCTTCTGGTCAAACAGCAACCATAGTCCTTCGT GGTGGTGCAGATCAGTTCATCGAGGAAGCAGAAAGGAGCCTCCACGATGCCATCATGATT GTTAGAAGAGCTCTTAAGAACTCAACAGTTGTACCTGGTGGTGGTGCTATTGATATGGAA ATAAGCAAGTACCTCAGACAGCATGCACGTACCATAGCTGGGAAGTCTCAATTCTTCGTA AACTCATTTGCTAAAGCCCTCGAGGTTATTCCAAGACAACTTTGTGACAATGCTGGATTT GATGCAACTGATGTACTCAATAAGCTCCGACAGAAACATGCATCTGGTGAAGGTGCTAAT TTTGGTGTGGACATCAACACTGGTGGAATTGCTGATTCCTTTGCTAACTTTGTCTGGGAA CCTGCTGTTGTGAAGATCAATGCTATAAATGCTGCAACTGAAGCTGCTTGCCTTATTCTC AGCGTGGATGAGACAGTTAAAAATCCCAAGTCTGAAAGTGCGCAAGGTGATGCGGCTGCT AGCGCGATGGCTGGCCGTGGCGGAGGAGCGATGCGGGGCCGTGGTGGAAGGGGCATGAGG AGGCGGTAA

Peptide Sequence

PEP ID	Os06t0687700-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:28682065:28684964:-1 gene:Os06g0687700 transcript:Os06t0687700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-complex protein 1, eta subunit (TCP-1-eta) (CCT-eta) (HIV-1 Nef interacting protein). (Os06t0687700-01)
Sequence	RLSDPLQYQSIVDAEWNIIYDKLDKCVKSGAKIVLSRLAIGDLATQYFADRDIFCAGRVA EEDLQRVAAATGGTVQTSVNNVIDEVLGTCEVFEERQVGNERFNIFSGCPSGQTATIVLR GGADQFIEEAERSLHDAIMIVRRALKNSTVVPGGGAIDMEISKYLRQHARTIAGKSQFFV NSFAKALEVIPRQLCDNAGFDATDVLNKLRQKHASGEGANFGVDINTGGIADSFANFVWE PAVVKINAINAATEAACLILSVDETVKNPKSESAQGDAAASAMAGRGGGAMRGRGGRGMR RR

Transcript Sequence

Transcript ID	Os06t0687700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28682065:28684964:-1 gene:Os06g0687700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-complex protein 1, eta subunit (TCP-1-eta) (CCT-eta) (HIV-1 Nef interacting protein). (Os06t0687700-01)
Sequence	AGATTGTCTGACCCTTTACAATACCAATCAATCGTCGATGCTGAATGGAATATCATTTAT GACAAGTTGGATAAATGTGTCAAAAGTGGGGCAAAGATAGTCCTTTCTCGGTTGGCAATT GGTGATCTTGCAACACAGTATTTTGCAGACCGGGACATTTTCTGTGCTGGCCGTGTTGCA GAAGAGGATTTACAACGTGTTGCAGCAGCAACAGGTGGTACCGTTCAGACATCAGTGAAT AATGTCATTGATGAGGTACTTGGTACTTGCGAAGTTTTCGAGGAAAGGCAAGTGGGCAAT GAACGGTTCAATATATTTAGTGGTTGCCCTTCTGGTCAAACAGCAACCATAGTCCTTCGT GGTGGTGCAGATCAGTTCATCGAGGAAGCAGAAAGGAGCCTCCACGATGCCATCATGATT GTTAGAAGAGCTCTTAAGAACTCAACAGTTGTACCTGGTGGTGGTGCTATTGATATGGAA ATAAGCAAGTACCTCAGACAGCATGCACGTACCATAGCTGGGAAGTCTCAATTCTTCGTA AACTCATTTGCTAAAGCCCTCGAGGTTATTCCAAGACAACTTTGTGACAATGCTGGATTT GATGCAACTGATGTACTCAATAAGCTCCGACAGAAACATGCATCTGGTGAAGGTGCTAAT TTTGGTGTGGACATCAACACTGGTGGAATTGCTGATTCCTTTGCTAACTTTGTCTGGGAA CCTGCTGTTGTGAAGATCAATGCTATAAATGCTGCAACTGAAGCTGCTTGCCTTATTCTC AGCGTGGATGAGACAGTTAAAAATCCCAAGTCTGAAAGTGCGCAAGGTGATGCGGCTGCT AGCGCGATGGCTGGCCGTGGCGGAGGAGCGATGCGGGGCCGTGGTGGAAGGGGCATGAGG AGGCGGTAATCAATCTACGCCACGTTTGTTTAGCTTCGTCGCTCGTGTGGTTTAAATTTA GGAGTAGGTTATTTGCAGTCTGCTCTTTATCGAAGTTTTTCGTGACGCTACATGCATGCC CTGCTCGATGTATTTCCAATTGTGCTTGTCAGATTCGTGAAAACATGGCAAATATTTTTG TGATGGTTGCCTACTAGCTTTTGTAACTTCACATGTTGACTGTTTCAATCAATGGGTATT CTTCTTGATCCTC