Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0687100-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:28651070:28652594:1 gene:Os06g0687100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab5C1 description:Similar to predicted protein. (Os06t0687100-01)
Sequence	ATGTTATCCAGGCCAAGCTGGTGGGTACTTCTGGGTGACTTGGGAGCCGGGAAGACGAGC ATCGTGGTTCGATTTGCCAAAGGATTGTACTACGATTGCCAGGAGTCGACGATCGGGGCA GCGTTCTTCTCGCAGGTGCTGATCATGGACGAGGCCACCGTGAAGCTTGACATCTGGGAC ACCGCCGGCCAAGAACGCTACCACAGCCTTGCGCCCATGTACTACCGCGGCGCGGCCGCC GCTGTCGTCGTCTACGACATCTCCAGCACGGATTCTTACATTCGAGCAAGGAAGTGGGTC GACGAACTCCAGAGACAAGGGAATCCACATTTGGTGATGGCATTAGTGGGCAACAAGGTC GACCTGGAAGAAAAGAGGCAGGTTGGAACGCAGGAGGCGATGGAATACGCAGAGCGAAAC GGCCTCTTCTTCATAGAGACCTCGGCCAAGACGTCGCAGAACGTCACCGAGCTCTTCTAC GAACTAGCTGATAGGCTGGTCAAAGTGCGACCTCACCGCCCTTCCGGGATGGTTCTCCAC GACGGCCGGCGCCGCCGCGACGACGGCGGCGGCTGGCCATGGCGGCTCTGTTGCTCCGGC TGA

Peptide Sequence

PEP ID	Os06t0687100-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:28651070:28652594:1 gene:Os06g0687100 transcript:Os06t0687100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab5C1 description:Similar to predicted protein. (Os06t0687100-01)
Sequence	MLSRPSWWVLLGDLGAGKTSIVVRFAKGLYYDCQESTIGAAFFSQVLIMDEATVKLDIWD TAGQERYHSLAPMYYRGAAAAVVVYDISSTDSYIRARKWVDELQRQGNPHLVMALVGNKV DLEEKRQVGTQEAMEYAERNGLFFIETSAKTSQNVTELFYELADRLVKVRPHRPSGMVLH DGRRRRDDGGGWPWRLCCSG

Transcript Sequence

Transcript ID	Os06t0687100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28651070:28652594:1 gene:Os06g0687100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab5C1 description:Similar to predicted protein. (Os06t0687100-01)
Sequence	GTCTTTGCATCAACTGAAAAAAAGAAAAGCATTGCTACTTCACTTCTGCTCGCATTTCAA TTCTGAATTATCCTGATCCAAACGGCAGCGGTAAAAGCGAACTAGGAGCGATCGATCGAT GGGGAGCGATGTTATCCAGGCCAAGCTGGTGGGTACTTCTGGGTGACTTGGGAGCCGGGA AGACGAGCATCGTGGTTCGATTTGCCAAAGGATTGTACTACGATTGCCAGGAGTCGACGA TCGGGGCAGCGTTCTTCTCGCAGGTGCTGATCATGGACGAGGCCACCGTGAAGCTTGACA TCTGGGACACCGCCGGCCAAGAACGCTACCACAGCCTTGCGCCCATGTACTACCGCGGCG CGGCCGCCGCTGTCGTCGTCTACGACATCTCCAGCACGGATTCTTACATTCGAGCAAGGA AGTGGGTCGACGAACTCCAGAGACAAGGGAATCCACATTTGGTGATGGCATTAGTGGGCA ACAAGGTCGACCTGGAAGAAAAGAGGCAGGTTGGAACGCAGGAGGCGATGGAATACGCAG AGCGAAACGGCCTCTTCTTCATAGAGACCTCGGCCAAGACGTCGCAGAACGTCACCGAGC TCTTCTACGAACTAGCTGATAGGCTGGTCAAAGTGCGACCTCACCGCCCTTCCGGGATGG TTCTCCACGACGGCCGGCGCCGCCGCGACGACGGCGGCGGCTGGCCATGGCGGCTCTGTT GCTCCGGCTGATGCGCCTCTACCGACTCCCGAAATACGCCATCCTTAATCGAAAACGTCT TTTACTGAACCCGCCTTGGACTTTAAATGTCCCTGGTAGATAAGGCAATGGATATATGCT GATGAGGCACGTGCTGACGTGTCTATGT