Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0685300-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:28558359:28564077:1 gene:Os06g0685300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os06t0685300-00)
Sequence	ATGGGGCTCGTCGGTGGCCTCCTCGGCTTCGGCGTCGGCCTCCCCCTCGGCATCGCCGTC GCCTACCTCGTCTACCTCCGCTTGTTCGCCCCTCGCCGCCGTCTCCAGGATCCTATTATT AGACCACTACGCGACTTGGATTCTGAGACATTACAGACAACTATACCAGATATTCCGTTG TGGGTGAAGTGTCCAGATTATGAACGGGTTGACTGGATTAACAAGTTTATTTTTGATATG TGGCCCTTCCTTGATAAGGCAATCTGCAACACAATAAGAAGTGTAATCAGACCAACATTT GATCAATATGTTGGACAATATGGAATAAAATCAATTGAATTTGGGCACTTAACACTTGGG GCTCTTCCTCCTACGTTCCAAGGAATTAAAGTTTATGAAATGAGAGAAAAAGAGTTGGTA ATTGAACCTGTGATTCGGTGGGCCAGCATAGCAAATGTAATTGTGAAAGTGAAGGTGCAT TCTTTCCAAGTGTCGGCTCAGCTTTTAGATTTACATATAATGCTGACACCACGTGTGACT CTGAAGCCTCTTGTGCCAAGCTTTCCCTGCTTTGCAAACTTGTGTGTTTCACTGATGGAG AAGCCACATATCGACTTTGGATTCAAATTGTTGGGTGGAGATGTCATGGCAATACCTGGC TTGCATCGGTTTGTCCGGGAGAAAATATCAAAGCAAATCGCAAACTTGTATCACTGGCCT AAGCTTATACAAATTCCTATTTTAGATGAAGCGAGTGGTGCGACAAAGAAACCAGTTGGA ATATTACATGTAAAGGTAATTCGAGCCATGAATCTTCTCAAGATGGACTTGCTTGGAAAA TCTGATCCCTATGTCAAGCTCCGTTTGAGTGGTGAGAAACTGCCTTCAAAGAAGACGTCT ATTAAGATGAGCAACCTGAATCCTGAGTGGAATGAACACTTCAGATTTATAGTCAAGGAT CCTGAAACACAAATCCTTGAGCTCCGCATGTTTGATTGGGAAAAGGTTAAAATGCATGAT AAACTGGGTATGCAAGTAGTTCCCCTCCGCTTGCTTACTCCTTATGAGAGTAAACTGTTC ACACTTGACCTTCTGAAAAGCATGGACCCAAATGATCCTCATAACAAGAAGAACAGAGGA AAGCTTGTCGTAGAGCTGACATTTGATCCCTTCAGAGATGACAGCAACAGTACCATTCTG ATGTCAGATGGTGAAGGCAATGTCAGTGTAAAAAGGGACGTCCCACCTAGTGGAGGGTTG CTGTTGGTTTCAGTAGAAAATGCAGAAGACGTCGAGGGAAAGCGTCATACTAATCCGTAT GCCGTGGTTCATTTTAGGGGAGAAAGGAAGGAAACGAAGATAATCAAGAAAACAAGAGAT CCAAGATGGAACGAAGAGTTTCAGTTCATGGTTGATGAGGCTCCTGTGGATGATAAGATC CACATCGAAGTAGTAAGCAAACGCCGTGGGCTCCGGCTTCCCTTCCGCAATAAGGAATCA TTGGGGCATGTGGATATAAACCTAGTGGACGTCGTGAACAACGGACGGATCAACGAAAAA TACCATCTGATCAACTCGAGGAACGGGATGGTACACGTCGAGATGAAATGGAGCACTGTA TGA

Peptide Sequence

PEP ID	Os06t0685300-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:28558359:28564077:1 gene:Os06g0685300 transcript:Os06t0685300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os06t0685300-00)
Sequence	MGLVGGLLGFGVGLPLGIAVAYLVYLRLFAPRRRLQDPIIRPLRDLDSETLQTTIPDIPL WVKCPDYERVDWINKFIFDMWPFLDKAICNTIRSVIRPTFDQYVGQYGIKSIEFGHLTLG ALPPTFQGIKVYEMREKELVIEPVIRWASIANVIVKVKVHSFQVSAQLLDLHIMLTPRVT LKPLVPSFPCFANLCVSLMEKPHIDFGFKLLGGDVMAIPGLHRFVREKISKQIANLYHWP KLIQIPILDEASGATKKPVGILHVKVIRAMNLLKMDLLGKSDPYVKLRLSGEKLPSKKTS IKMSNLNPEWNEHFRFIVKDPETQILELRMFDWEKVKMHDKLGMQVVPLRLLTPYESKLF TLDLLKSMDPNDPHNKKNRGKLVVELTFDPFRDDSNSTILMSDGEGNVSVKRDVPPSGGL LLVSVENAEDVEGKRHTNPYAVVHFRGERKETKIIKKTRDPRWNEEFQFMVDEAPVDDKI HIEVVSKRRGLRLPFRNKESLGHVDINLVDVVNNGRINEKYHLINSRNGMVHVEMKWSTV

Transcript Sequence

Transcript ID	Os06t0685300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28558359:28564077:1 gene:Os06g0685300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os06t0685300-00)
Sequence	GCTCACGCCTCGTCTCGCTCGACGTCTCCGAGGAGGCGAGGAGCTCGAGCTCGCCGCCTC GCCGGCCGGCCATTACTTTATCCGCGGCGGGTAGCTGGGGAGGGAGGGGAGGCGGCCGGC CACCAACCCATCGTCGTCTTGTGGTTTCCCATGCGGTTGCCGCCGCGGGCGCCGCTGCAT TCGCGGGAGCGGGCGGGAACGGGATGGGGCTCGTCGGTGGCCTCCTCGGCTTCGGCGTCG GCCTCCCCCTCGGCATCGCCGTCGCCTACCTCGTCTACCTCCGCTTGTTCGCCCCTCGCC GCCGTCTCCAGGATCCTATTATTAGACCACTACGCGACTTGGATTCTGAGACATTACAGA CAACTATACCAGATATTCCGTTGTGGGTGAAGTGTCCAGATTATGAACGGGTTGACTGGA TTAACAAGTTTATTTTTGATATGTGGCCCTTCCTTGATAAGGCAATCTGCAACACAATAA GAAGTGTAATCAGACCAACATTTGATCAATATGTTGGACAATATGGAATAAAATCAATTG AATTTGGGCACTTAACACTTGGGGCTCTTCCTCCTACGTTCCAAGGAATTAAAGTTTATG AAATGAGAGAAAAAGAGTTGGTAATTGAACCTGTGATTCGGTGGGCCAGCATAGCAAATG TAATTGTGAAAGTGAAGGTGCATTCTTTCCAAGTGTCGGCTCAGCTTTTAGATTTACATA TAATGCTGACACCACGTGTGACTCTGAAGCCTCTTGTGCCAAGCTTTCCCTGCTTTGCAA ACTTGTGTGTTTCACTGATGGAGAAGCCACATATCGACTTTGGATTCAAATTGTTGGGTG GAGATGTCATGGCAATACCTGGCTTGCATCGGTTTGTCCGGGAGAAAATATCAAAGCAAA TCGCAAACTTGTATCACTGGCCTAAGCTTATACAAATTCCTATTTTAGATGAAGCGAGTG GTGCGACAAAGAAACCAGTTGGAATATTACATGTAAAGGTAATTCGAGCCATGAATCTTC TCAAGATGGACTTGCTTGGAAAATCTGATCCCTATGTCAAGCTCCGTTTGAGTGGTGAGA AACTGCCTTCAAAGAAGACGTCTATTAAGATGAGCAACCTGAATCCTGAGTGGAATGAAC ACTTCAGATTTATAGTCAAGGATCCTGAAACACAAATCCTTGAGCTCCGCATGTTTGATT GGGAAAAGGTTAAAATGCATGATAAACTGGGTATGCAAGTAGTTCCCCTCCGCTTGCTTA CTCCTTATGAGAGTAAACTGTTCACACTTGACCTTCTGAAAAGCATGGACCCAAATGATC CTCATAACAAGAAGAACAGAGGAAAGCTTGTCGTAGAGCTGACATTTGATCCCTTCAGAG ATGACAGCAACAGTACCATTCTGATGTCAGATGGTGAAGGCAATGTCAGTGTAAAAAGGG ACGTCCCACCTAGTGGAGGGTTGCTGTTGGTTTCAGTAGAAAATGCAGAAGACGTCGAGG GAAAGCGTCATACTAATCCGTATGCCGTGGTTCATTTTAGGGGAGAAAGGAAGGAAACGA AGATAATCAAGAAAACAAGAGATCCAAGATGGAACGAAGAGTTTCAGTTCATGGTTGATG AGGCTCCTGTGGATGATAAGATCCACATCGAAGTAGTAAGCAAACGCCGTGGGCTCCGGC TTCCCTTCCGCAATAAGGAATCATTGGGGCATGTGGATATAAACCTAGTGGACGTCGTGA ACAACGGACGGATCAACGAAAAATACCATCTGATCAACTCGAGGAACGGGATGGTACACG TCGAGATGAAATGGAGCACTGTATGACAATGATTCGGTATTCTGAAGAGTCTCACCTGTA TGATTATACCTGTCGCTGTACATATACAGTCGCCATACTCCGTGTGGGCCATGTATGTTG TAACTTTAGCCCTAATCCTCTACTCTCTCGCTCTTTTCGTGATCCATTTTGGGCGCTTTT TAGCGTGCTGTAACGTCAATGATAGTGGCGTGATCACTTGCTTGT