Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0684500-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:28524559:28525825:1 gene:Os06g0684500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0684500-01)
Sequence

ATGAAGATCGGAGATGGCTCGACCTCCGATGCCTCCGTGGAGCGCGTCGTGCCCAATTCC
AGCGTCATGGAGCTGCTGCTGCTAACCAGGGCCAACTACCATCAGTGGGCCTTGGTTATG
CGGGTGAGCTTGGAGGCGCTGGAGTTGTGGGACGCGGTGGAAGCGGTCACCAAGGATAGG
CGGGCGTTGGCCACCATCTTGCACGCGGTACCACCGAAGATGAAGGTCGGGCTCGCCGTG
AAGACGTCGGCGAAGGAAGCGTGGGACTCGGTGAAGAAGATGCGAGCCGGCGACGACCGC
GTGAAGTCAGCGAGTGTGCAACGCTTCATGAAGGAGTTTGAGAACATGATGTTCCGCGAC
GGGGAGACCGTCGGCGACTTTGCGATGCGCATCAACGGGCCCACCGCGAGCCTGCGTGAC
CTTGGGGAGGAGATAGAAGACAGCCACGTGGTGAAGAAGGTCCTGCGCGTGGTCCCGAAG
AGGTTGAAGCAAGTCACGGTGGCAATTGAGATGCTCGAGGACATGGATGATATGTCCGTT
GAGGAGCTCGTCGGGCGGCTGCAAGTGGCGGTGGACGCCGACGTTGAAGATCAAACGGAG
GTCCATGGCGGGCAGCTACTTCTCGCTGAGGAGCAGTGGGAGGCTAGCAGGCGTCAACGC
GGCAGCAAGCAGCACACAGGCAGTGGGGTGCGCCATGACAATGGCAAGAAAGGCGACGAC
CATGGTGGAGACTGCGAGGATGACGATGACGACGGCAGCAGCACGAGCTCAGGGCTGGAT
CGACAGGATCCCGTCGAATGTGCTCCACTTGATAGGATCCCGTCGAATGCGCTCCATTCG
ATTGCCTGGCTTGTCAAACTAAGCTAG

Peptide Sequence

PEP ID

Os06t0684500-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:28524559:28525825:1 gene:Os06g0684500 transcript:Os06t0684500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0684500-01)
Sequence

MKIGDGSTSDASVERVVPNSSVMELLLLTRANYHQWALVMRVSLEALELWDAVEAVTKDR
RALATILHAVPPKMKVGLAVKTSAKEAWDSVKKMRAGDDRVKSASVQRFMKEFENMMFRD
GETVGDFAMRINGPTASLRDLGEEIEDSHVVKKVLRVVPKRLKQVTVAIEMLEDMDDMSV
EELVGRLQVAVDADVEDQTEVHGGQLLLAEEQWEASRRQRGSKQHTGSGVRHDNGKKGDD
HGGDCEDDDDDGSSTSSGLDRQDPVECAPLDRIPSNALHSIAWLVKLS

Transcript Sequence

Transcript ID

Os06t0684500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:28524559:28525825:1 gene:Os06g0684500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0684500-01)
Sequence

TTTTGTTTGTGTTCATGAGTGTGAGAGTGTTCCTAGGCTAAGCCAACATTTGGTATCAGA
GCCTGGAGATGAAGATCGGAGATGGCTCGACCTCCGATGCCTCCGTGGAGCGCGTCGTGC
CCAATTCCAGCGTCATGGAGCTGCTGCTGCTAACCAGGGCCAACTACCATCAGTGGGCCT
TGGTTATGCGGGTGAGCTTGGAGGCGCTGGAGTTGTGGGACGCGGTGGAAGCGGTCACCA
AGGATAGGCGGGCGTTGGCCACCATCTTGCACGCGGTACCACCGAAGATGAAGGTCGGGC
TCGCCGTGAAGACGTCGGCGAAGGAAGCGTGGGACTCGGTGAAGAAGATGCGAGCCGGCG
ACGACCGCGTGAAGTCAGCGAGTGTGCAACGCTTCATGAAGGAGTTTGAGAACATGATGT
TCCGCGACGGGGAGACCGTCGGCGACTTTGCGATGCGCATCAACGGGCCCACCGCGAGCC
TGCGTGACCTTGGGGAGGAGATAGAAGACAGCCACGTGGTGAAGAAGGTCCTGCGCGTGG
TCCCGAAGAGGTTGAAGCAAGTCACGGTGGCAATTGAGATGCTCGAGGACATGGATGATA
TGTCCGTTGAGGAGCTCGTCGGGCGGCTGCAAGTGGCGGTGGACGCCGACGTTGAAGATC
AAACGGAGGTCCATGGCGGGCAGCTACTTCTCGCTGAGGAGCAGTGGGAGGCTAGCAGGC
GTCAACGCGGCAGCAAGCAGCACACAGGCAGTGGGGTGCGCCATGACAATGGCAAGAAAG
GCGACGACCATGGTGGAGACTGCGAGGATGACGATGACGACGGCAGCAGCACGAGCTCAG
GGCTGGATCGACAGGATCCCGTCGAATGTGCTCCACTTGATAGGATCCCGTCGAATGCGC
TCCATTCGATTGCCTGGCTTGTCAAACTAAGCTAGTTCAACAGGTCCCTATTTTTGCAAA
TAAATCCGGATACCAACTTTTGTTTTTGTGACTTTTTATTAAAATAATAATATTTCTAAG
AAAATGCCAGCGCACACCACGAGTGTGTTTGGGTCTACATGCATGTAGTAGAGTACGCGG
ACATCTGATGTTTGATAAAAGATGTCCCTCCTTTTTGTGGCTTTCTCTGTTTTTTTCACT
GGAACAAATAAGATGTCCCTCCTTTTTTTAATCACTTTCAACTACGTGGTACGACACATT
GAAGGTCCAGTGTAGTGCCTCTTTAAAACCCACCTATCAGGCCTCTTGAAGCCTATCAGC
CCCCTTG