Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0684000-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:28504190:28508808:-1 gene:Os06g0684000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Calcium-binding EF-hand. (Os06t0684000-01);Similar to External rotenone-insensitive NADPH dehydrogenase. (Os06t0684000-02)
Sequence	ATGGGGTTCTTCTTCTTCGCGTCCCGTGCTGCTGCTCGGTTCTTGGGCGAGGCTAGGATC ATCCACCCCGGCGTCTCCACCGCTGCGCTTCTTGTTGCAGCAGCCAGTGGTGGAGGCCTT GTGGCGTATGCTGATTCTGCTGGAGAGAATGCATCATCAGAGACATCTCAGGAGGCTCCC AGGAAGAAGAAGGTTGTGGTTCTTGGGACTGGCTGGGCTGGGACGTCCTTCCTCAAAGAT CTTGACTGCTCCAAGTATGAAGTGAAAGTCATATCGCCCCGGAATTACTTTGCATTTACA CCTTTGCTTCCGAGTGTGACTTGTGGGACTGTAGAGGCACGCAGCATCGTTGAACCGATA CGAAAGATGCTTGAGAAGAAAAGGAAAGATGTTGCATTCTATGAAGCTGAGTGTTTCAAG ATTGATGCATCAAAGAAAGCTGTCCATTGCCGGTCTGCCGTTGGAACAAATTTTGATGGC AATGGTGATTTTATGGTTGATTATGATTATTTAGTTGTTGCTCTTGGGGCTACAGTAAAT ACATTCAACACTCCTGGTGTGATGGAGAACTGCTACTTTCTGAAGGAAGTAGAGGATGCT CAAAAGATCAGGAGGAATGTGATAGACTGCTTTGAAAAAGCTTCACTTCCTAACATTAGT GAAGAGGAGAAAAGGAAGATTCTTCACTTTGTAATTATTGGTGGTGGGCCTACTGGGGTT GAATTTGCTGCAGAGATGCATGATTTTCTTGTTGAGGATCTGGTGAAGCTATATCCTGCA ATTCAAGATTTTGTGAAGATAACAATTATTCAGTCCGGTGAACATATATTGAACATGTTT GACCAACGGATAGCTACATTTGCTGAAATGAAGTTCCAGAGAGACGGCATTGAGGTGAAC ACAGGGTTCAGAGTGGTAAAGGTCTCTGATGATTTAATTACAATGAAGAGCAAATCCCTT GGTGAGGTATCAGTACCATATGGAATGGCTGTTTGGTCTGCTGGCATTGGTACTCGTCCC GTCATTATGGACTTCATGCAACAGATCGGTCAGACTAATCGGCGTGTCTTGGCAACTAAT GAATGGTTAAGAGTTCATGAGTGTGATAATATATATGCAATTGGTGACTGTGCTTCAATA ACTCAAAGGAAAATAATGGATGACATTTCAACAGTATTTAAAATGGCTGATAAAGACAAC TCCGGCACTCTAACACTCAAAGAGATAAATGATGTTCTTGAAGACATTTGTATAAGATAC CCACAAGTAGAACTGTATATGAAAAGTATGCACATGCTTGACATTAGGGATTTGATAAAA GATGCCATAGGTGATTCTCACAAGGAGTCGATGGTGGTTAACATAGAGGAGTTCAAAAAA GCTCTGTCTCATGTGGATTCCCAAGTTAAAAGTATTCCAGCAACAGCTCAGGTTGCAGCA CAACAAGGACACTATCTTGCTGAATGTTTTAACAAGATGGACCAATGCAAAGAACATCCA GAAGGTCCGTTGCGCATGACAGGAACAGGATCAGGACGACACAATTTCCGCCCATTCCGG TACAAGCATCTTGGGCAATTTGCACCCTTGGGTGGAGAGCAAGCTGCTGCAGAGCTCCCA GGCGACTGGGTTTCCATGGGCCATAGCACTCAGTGGCTCTGGTACTCTGTATATGCAAGC AAACAAGTGAGTTGGCGCACACGGATGCTGGTGGTATCCGACTGGACTCGGAGGTTCATA TTTGGGAGGGATTCAAGCCGAATTTAG

Peptide Sequence

PEP ID	Os06t0684000-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:28504190:28508808:-1 gene:Os06g0684000 transcript:Os06t0684000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Calcium-binding EF-hand. (Os06t0684000-01);Similar to External rotenone-insensitive NADPH dehydrogenase. (Os06t0684000-02)
Sequence	MGFFFFASRAAARFLGEARIIHPGVSTAALLVAAASGGGLVAYADSAGENASSETSQEAP RKKKVVVLGTGWAGTSFLKDLDCSKYEVKVISPRNYFAFTPLLPSVTCGTVEARSIVEPI RKMLEKKRKDVAFYEAECFKIDASKKAVHCRSAVGTNFDGNGDFMVDYDYLVVALGATVN TFNTPGVMENCYFLKEVEDAQKIRRNVIDCFEKASLPNISEEEKRKILHFVIIGGGPTGV EFAAEMHDFLVEDLVKLYPAIQDFVKITIIQSGEHILNMFDQRIATFAEMKFQRDGIEVN TGFRVVKVSDDLITMKSKSLGEVSVPYGMAVWSAGIGTRPVIMDFMQQIGQTNRRVLATN EWLRVHECDNIYAIGDCASITQRKIMDDISTVFKMADKDNSGTLTLKEINDVLEDICIRY PQVELYMKSMHMLDIRDLIKDAIGDSHKESMVVNIEEFKKALSHVDSQVKSIPATAQVAA QQGHYLAECFNKMDQCKEHPEGPLRMTGTGSGRHNFRPFRYKHLGQFAPLGGEQAAAELP GDWVSMGHSTQWLWYSVYASKQVSWRTRMLVVSDWTRRFIFGRDSSRI

Transcript Sequence

Transcript ID	Os06t0684000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:28504190:28508808:-1 gene:Os06g0684000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Calcium-binding EF-hand. (Os06t0684000-01);Similar to External rotenone-insensitive NADPH dehydrogenase. (Os06t0684000-02)
Sequence	ATCGTTGATTACTCGATTGGTTAAGAAAGCGAAGAGCTTTGCCCCAATGCTCAGGGAAGC AGGGACAAACTGAGCTGTGAGAAGTAGACAGAGACAGAGGAGAGGAGGATGGGGTTCTTC TTCTTCGCGTCCCGTGCTGCTGCTCGGTTCTTGGGCGAGGCTAGGATCATCCACCCCGGC GTCTCCACCGCTGCGCTTCTTGTTGCAGCAGCCAGTGGTGGAGGCCTTGTGGCGTATGCT GATTCTGCTGGAGAGAATGCATCATCAGAGACATCTCAGGAGGCTCCCAGGAAGAAGAAG GTTGTGGTTCTTGGGACTGGCTGGGCTGGGACGTCCTTCCTCAAAGATCTTGACTGCTCC AAGTATGAAGTGAAAGTCATATCGCCCCGGAATTACTTTGCATTTACACCTTTGCTTCCG AGTGTGACTTGTGGGACTGTAGAGGCACGCAGCATCGTTGAACCGATACGAAAGATGCTT GAGAAGAAAAGGAAAGATGTTGCATTCTATGAAGCTGAGTGTTTCAAGATTGATGCATCA AAGAAAGCTGTCCATTGCCGGTCTGCCGTTGGAACAAATTTTGATGGCAATGGTGATTTT ATGGTTGATTATGATTATTTAGTTGTTGCTCTTGGGGCTACAGTAAATACATTCAACACT CCTGGTGTGATGGAGAACTGCTACTTTCTGAAGGAAGTAGAGGATGCTCAAAAGATCAGG AGGAATGTGATAGACTGCTTTGAAAAAGCTTCACTTCCTAACATTAGTGAAGAGGAGAAA AGGAAGATTCTTCACTTTGTAATTATTGGTGGTGGGCCTACTGGGGTTGAATTTGCTGCA GAGATGCATGATTTTCTTGTTGAGGATCTGGTGAAGCTATATCCTGCAATTCAAGATTTT GTGAAGATAACAATTATTCAGTCCGGTGAACATATATTGAACATGTTTGACCAACGGATA GCTACATTTGCTGAAATGAAGTTCCAGAGAGACGGCATTGAGGTGAACACAGGGTTCAGA GTGGTAAAGGTCTCTGATGATTTAATTACAATGAAGAGCAAATCCCTTGGTGAGGTATCA GTACCATATGGAATGGCTGTTTGGTCTGCTGGCATTGGTACTCGTCCCGTCATTATGGAC TTCATGCAACAGATCGGTCAGACTAATCGGCGTGTCTTGGCAACTAATGAATGGTTAAGA GTTCATGAGTGTGATAATATATATGCAATTGGTGACTGTGCTTCAATAACTCAAAGGAAA ATAATGGATGACATTTCAACAGTATTTAAAATGGCTGATAAAGACAACTCCGGCACTCTA ACACTCAAAGAGATAAATGATGTTCTTGAAGACATTTGTATAAGATACCCACAAGTAGAA CTGTATATGAAAAGTATGCACATGCTTGACATTAGGGATTTGATAAAAGATGCCATAGGT GATTCTCACAAGGAGTCGATGGTGGTTAACATAGAGGAGTTCAAAAAAGCTCTGTCTCAT GTGGATTCCCAAGTTAAAAGTATTCCAGCAACAGCTCAGGTTGCAGCACAACAAGGACAC TATCTTGCTGAATGTTTTAACAAGATGGACCAATGCAAAGAACATCCAGAAGGTCCGTTG CGCATGACAGGAACAGGATCAGGACGACACAATTTCCGCCCATTCCGGTACAAGCATCTT GGGCAATTTGCACCCTTGGGTGGAGAGCAAGCTGCTGCAGAGCTCCCAGGCGACTGGGTT TCCATGGGCCATAGCACTCAGTGGCTCTGGTACTCTGTATATGCAAGCAAACAAGTGAGT TGGCGCACACGGATGCTGGTGGTATCCGACTGGACTCGGAGGTTCATATTTGGGAGGGAT TCAAGCCGAATTTAGCACTGCCAAATGCTGCATCATTTCTTGTAGAGATAACATTGCTGA ATAATTTTGTTGTCTTTGGCTGTGTTTAGTTCGTGTGCCAAAAAAAAATTTTTGAAGTAT ACGGACACATTTGAAGTATTAAATGTAGACTAATAACAAAACAGATTACAGATTTCGCTT ATAAACTGCGAGACGAATCTATTAAGCCTAATTAATTCGTCATTAGCAAATGTTTACTTG AGCACCACATTGTCAAATCAAGACGTAATTAGACTCAAAAGATTCGTCTCGCAATTTACA TGCAAACTGTGCAATTGGTTTTTTTCGTCCATATTTAATGCTCCATATATGTATTCAAAC ATTTGATGTGACGGAAAAGTTGAAAGTTTGAAGAAAAAAGTTTGAATATAAACCATGCCT TTG